RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 TERF2IPQ9NYB0 399 aa20.04■□□□□ 0.8
SAFB2-205ENST00000590000 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
SAFB2-205ENST00000590000 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
SAFB2-205ENST00000590000 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
SAFB2-205ENST00000590000 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
SAFB2-205ENST00000590000 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
SAFB2-205ENST00000590000 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
SAFB2-205ENST00000590000 USHBP1Q8N6Y0 703 aa20■□□□□ 0.79
SAFB2-205ENST00000590000 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
SAFB2-205ENST00000590000 NLGN2Q8NFZ4 835 aa19.99■□□□□ 0.79
SAFB2-205ENST00000590000 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
SAFB2-205ENST00000590000 FYB1O15117 783 aa19.97■□□□□ 0.79
SAFB2-205ENST00000590000 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
SAFB2-205ENST00000590000 ZCRB1Q8TBF4 217 aaKnown RBP19.97■□□□□ 0.79
SAFB2-205ENST00000590000 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
SAFB2-205ENST00000590000 COG3Q96JB2 828 aa19.97■□□□□ 0.79
SAFB2-205ENST00000590000 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
SAFB2-205ENST00000590000 AMPHP49418 695 aa19.95■□□□□ 0.78
SAFB2-205ENST00000590000 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
SAFB2-205ENST00000590000 COL23A1Q86Y22 540 aaPredicted RBP19.94■□□□□ 0.78
SAFB2-205ENST00000590000 SLC16A10Q8TF71 515 aa19.94■□□□□ 0.78
SAFB2-205ENST00000590000 TAF1LQ8IZX4 1826 aa19.94■□□□□ 0.78
SAFB2-205ENST00000590000 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
SAFB2-205ENST00000590000 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
SAFB2-205ENST00000590000 C5P01031 1676 aa19.92■□□□□ 0.78
SAFB2-205ENST00000590000 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
SAFB2-205ENST00000590000 KLHL34Q8N239 644 aa19.92■□□□□ 0.78
SAFB2-205ENST00000590000 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
SAFB2-205ENST00000590000 YBX3P16989 372 aaKnown RBP eCLIP19.91■□□□□ 0.78
SAFB2-205ENST00000590000 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
SAFB2-205ENST00000590000 ITGB4P16144 1822 aa19.9■□□□□ 0.78
SAFB2-205ENST00000590000 SMIM5Q71RC9 77 aa19.9■□□□□ 0.78
SAFB2-205ENST00000590000 GPR162Q16538 588 aa19.89■□□□□ 0.77
SAFB2-205ENST00000590000 CARD14Q9BXL6 1004 aa19.89■□□□□ 0.77
SAFB2-205ENST00000590000 USP47Q96K76 1375 aa19.88■□□□□ 0.77
SAFB2-205ENST00000590000 CYP27B1O15528 508 aa19.88■□□□□ 0.77
SAFB2-205ENST00000590000 C1QTNF8P60827 252 aa19.88■□□□□ 0.77
SAFB2-205ENST00000590000 MSL1Q68DK7 614 aa19.88■□□□□ 0.77
SAFB2-205ENST00000590000 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
SAFB2-205ENST00000590000 MAP2P11137 1827 aaKnown RBP19.87■□□□□ 0.77
SAFB2-205ENST00000590000 INSRP06213 1382 aa19.86■□□□□ 0.77
SAFB2-205ENST00000590000 POLD1P28340 1107 aa19.86■□□□□ 0.77
SAFB2-205ENST00000590000 EMILIN1Q9Y6C2 1016 aa19.86■□□□□ 0.77
SAFB2-205ENST00000590000 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
SAFB2-205ENST00000590000 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
SAFB2-205ENST00000590000 ANKRD26Q9UPS8 1709 aa19.85■□□□□ 0.77
SAFB2-205ENST00000590000 UBR3Q6ZT12 1888 aa19.84■□□□□ 0.77
SAFB2-205ENST00000590000 C4BP0C0L5 1744 aa19.84■□□□□ 0.77
SAFB2-205ENST00000590000 FLT4P35916 1363 aa19.83■□□□□ 0.76
SAFB2-205ENST00000590000 PALLDQ8WX93 1383 aa19.83■□□□□ 0.76
SAFB2-205ENST00000590000 SENP3-EIF4A1A0A087X0R7 540 aa19.82■□□□□ 0.76
SAFB2-205ENST00000590000 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
SAFB2-205ENST00000590000 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
SAFB2-205ENST00000590000 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
SAFB2-205ENST00000590000 MSH5O43196 834 aa19.8■□□□□ 0.76
SAFB2-205ENST00000590000 TMF1P82094 1093 aa19.8■□□□□ 0.76
SAFB2-205ENST00000590000 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
SAFB2-205ENST00000590000 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
SAFB2-205ENST00000590000 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
SAFB2-205ENST00000590000 NSD3Q9BZ95 1437 aa19.79■□□□□ 0.76
SAFB2-205ENST00000590000 CEP350Q5VT06 3117 aa19.79■□□□□ 0.76
SAFB2-205ENST00000590000 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
SAFB2-205ENST00000590000 PIGBQ92521 554 aa19.78■□□□□ 0.76
SAFB2-205ENST00000590000 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
SAFB2-205ENST00000590000 KIF24Q5T7B8 1368 aa19.77■□□□□ 0.76
SAFB2-205ENST00000590000 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
SAFB2-205ENST00000590000 LINC00116Q8NCU8 138 aa19.75■□□□□ 0.75
SAFB2-205ENST00000590000 ITPK1Q13572 414 aa19.74■□□□□ 0.75
SAFB2-205ENST00000590000 EYA1Q99502 592 aa19.74■□□□□ 0.75
SAFB2-205ENST00000590000 ATP10DQ9P241 1426 aa19.74■□□□□ 0.75
SAFB2-205ENST00000590000 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
SAFB2-205ENST00000590000 WWC3Q9ULE0 1092 aa19.73■□□□□ 0.75
SAFB2-205ENST00000590000 ADCY9O60503 1353 aa19.72■□□□□ 0.75
SAFB2-205ENST00000590000 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
SAFB2-205ENST00000590000 GIGYF1O75420 1035 aaPredicted RBP19.72■□□□□ 0.75
SAFB2-205ENST00000590000 CD2APQ9Y5K6 639 aa19.72■□□□□ 0.75
SAFB2-205ENST00000590000 PHF14O94880 888 aa19.71■□□□□ 0.75
SAFB2-205ENST00000590000 POLKQ9UBT6 870 aa19.71■□□□□ 0.75
SAFB2-205ENST00000590000 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
SAFB2-205ENST00000590000 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
SAFB2-205ENST00000590000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
SAFB2-205ENST00000590000 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
SAFB2-205ENST00000590000 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
SAFB2-205ENST00000590000 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
SAFB2-205ENST00000590000 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
SAFB2-205ENST00000590000 SIK1P57059 783 aa19.69■□□□□ 0.74
SAFB2-205ENST00000590000 CLSPNQ9HAW4 1339 aa19.68■□□□□ 0.74
SAFB2-205ENST00000590000 PHKG2P15735 406 aa19.67■□□□□ 0.74
SAFB2-205ENST00000590000 SMARCC1Q92922 1105 aaPredicted RBP19.67■□□□□ 0.74
SAFB2-205ENST00000590000 AK7Q96M32 723 aa19.67■□□□□ 0.74
SAFB2-205ENST00000590000 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
SAFB2-205ENST00000590000 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
SAFB2-205ENST00000590000 KDRP35968 1356 aa19.67■□□□□ 0.74
SAFB2-205ENST00000590000 EIF4A2Q14240 407 aaKnown RBP19.66■□□□□ 0.74
SAFB2-205ENST00000590000 FLAD1Q8NFF5 587 aa19.66■□□□□ 0.74
SAFB2-205ENST00000590000 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
SAFB2-205ENST00000590000 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
SAFB2-205ENST00000590000 MYH14Q7Z406 1995 aaKnown RBP19.64■□□□□ 0.74
SAFB2-205ENST00000590000 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
SAFB2-205ENST00000590000 N4BP2Q86UW6 1770 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms