RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
H3F3B-209ENST00000589949 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.61
H3F3B-209ENST00000589949 ATF5Q9Y2D1 282 aaPredicted RBP25.08■■□□□ 1.61
H3F3B-209ENST00000589949 NSD2O96028 1365 aa25.07■■□□□ 1.6
H3F3B-209ENST00000589949 INSRP06213 1382 aa25.07■■□□□ 1.6
H3F3B-209ENST00000589949 PRIM1P49642 420 aaKnown RBP25.07■■□□□ 1.6
H3F3B-209ENST00000589949 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
H3F3B-209ENST00000589949 KCNQ4P56696 695 aa25.05■■□□□ 1.6
H3F3B-209ENST00000589949 DOT1LQ8TEK3 1739 aa25.05■■□□□ 1.6
H3F3B-209ENST00000589949 FLT4P35916 1363 aa25.05■■□□□ 1.6
H3F3B-209ENST00000589949 SYTL4Q96C24 671 aaPredicted RBP25.03■■□□□ 1.6
H3F3B-209ENST00000589949 SGIP1Q9BQI5 828 aa25.02■■□□□ 1.6
H3F3B-209ENST00000589949 AKT1S1Q96B36 256 aa25.01■■□□□ 1.59
H3F3B-209ENST00000589949 KIF24Q5T7B8 1368 aa25.01■■□□□ 1.59
H3F3B-209ENST00000589949 SMG6Q86US8 1419 aaKnown RBP25.01■■□□□ 1.59
H3F3B-209ENST00000589949 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
H3F3B-209ENST00000589949 POLR3GLQ9BT43 218 aa25■■□□□ 1.59
H3F3B-209ENST00000589949 RAPGEF4Q8WZA2 1011 aa24.99■■□□□ 1.59
H3F3B-209ENST00000589949 MTFR1LQ9H019 292 aa24.99■■□□□ 1.59
H3F3B-209ENST00000589949 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
H3F3B-209ENST00000589949 PPM1GO15355 546 aaPredicted RBP24.97■■□□□ 1.59
H3F3B-209ENST00000589949 TATP17735 454 aaPredicted RBP24.97■■□□□ 1.59
H3F3B-209ENST00000589949 SLC27A3Q5K4L6 730 aa24.97■■□□□ 1.59
H3F3B-209ENST00000589949 ANKRD26Q9UPS8 1709 aa24.97■■□□□ 1.59
H3F3B-209ENST00000589949 LY75O60449 1722 aa24.96■■□□□ 1.59
H3F3B-209ENST00000589949 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
H3F3B-209ENST00000589949 NCAPD2Q15021 1401 aa24.95■■□□□ 1.59
H3F3B-209ENST00000589949 CYP27B1O15528 508 aa24.95■■□□□ 1.58
H3F3B-209ENST00000589949 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
H3F3B-209ENST00000589949 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
H3F3B-209ENST00000589949 WASHC2AQ641Q2 1341 aa24.94■■□□□ 1.58
H3F3B-209ENST00000589949 FHDC1Q9C0D6 1143 aaPredicted RBP24.93■■□□□ 1.58
H3F3B-209ENST00000589949 PNPLA7Q6ZV29 1317 aa24.92■■□□□ 1.58
H3F3B-209ENST00000589949 MAP2P11137 1827 aaKnown RBP24.92■■□□□ 1.58
H3F3B-209ENST00000589949 TUBGCP6Q96RT7 1819 aa24.91■■□□□ 1.58
H3F3B-209ENST00000589949 PCDH11XQ9BZA7 1347 aa24.91■■□□□ 1.58
H3F3B-209ENST00000589949 PCDH11YQ9BZA8 1340 aa24.91■■□□□ 1.58
H3F3B-209ENST00000589949 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
H3F3B-209ENST00000589949 EYA1Q99502 592 aa24.91■■□□□ 1.58
H3F3B-209ENST00000589949 SYT17Q9BSW7 474 aa24.9■■□□□ 1.58
H3F3B-209ENST00000589949 PANK3Q9H999 370 aa24.9■■□□□ 1.58
H3F3B-209ENST00000589949 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.58
H3F3B-209ENST00000589949 CCNL1Q9UK58 526 aaPredicted RBP24.89■■□□□ 1.58
H3F3B-209ENST00000589949 QSER1Q2KHR3 1735 aa24.89■■□□□ 1.57
H3F3B-209ENST00000589949 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.57
H3F3B-209ENST00000589949 ARXQ96QS3 562 aa24.87■■□□□ 1.57
H3F3B-209ENST00000589949 TFCP2L1Q9NZI6 479 aa24.87■■□□□ 1.57
H3F3B-209ENST00000589949 YY1P25490 414 aa24.85■■□□□ 1.57
H3F3B-209ENST00000589949 EIF4A2Q14240 407 aaKnown RBP24.85■■□□□ 1.57
H3F3B-209ENST00000589949 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
H3F3B-209ENST00000589949 COL24A1Q17RW2 1714 aa24.83■■□□□ 1.57
H3F3B-209ENST00000589949 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
H3F3B-209ENST00000589949 PALLDQ8WX93 1383 aa24.82■■□□□ 1.56
H3F3B-209ENST00000589949 ITGB4P16144 1822 aa24.82■■□□□ 1.56
H3F3B-209ENST00000589949 SLC16A10Q8TF71 515 aa24.82■■□□□ 1.56
H3F3B-209ENST00000589949 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
H3F3B-209ENST00000589949 PIGBQ92521 554 aa24.81■■□□□ 1.56
H3F3B-209ENST00000589949 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
H3F3B-209ENST00000589949 MAP3K5Q99683 1374 aa24.8■■□□□ 1.56
H3F3B-209ENST00000589949 C5P01031 1676 aa24.78■■□□□ 1.56
H3F3B-209ENST00000589949 DCAF8L1A6NGE4 600 aa24.78■■□□□ 1.56
H3F3B-209ENST00000589949 AMIGO3Q86WK7 504 aa24.78■■□□□ 1.56
H3F3B-209ENST00000589949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.78■■□□□ 1.56
H3F3B-209ENST00000589949 TAF1LQ8IZX4 1826 aa24.77■■□□□ 1.56
H3F3B-209ENST00000589949 PHKG2P15735 406 aa24.76■■□□□ 1.55
H3F3B-209ENST00000589949 IGSF1Q8N6C5 1336 aa24.76■■□□□ 1.55
H3F3B-209ENST00000589949 UTRNP46939 3433 aa24.75■■□□□ 1.55
H3F3B-209ENST00000589949 SMIM5Q71RC9 77 aa24.75■■□□□ 1.55
H3F3B-209ENST00000589949 POLD1P28340 1107 aa24.73■■□□□ 1.55
H3F3B-209ENST00000589949 MSL1Q68DK7 614 aa24.73■■□□□ 1.55
H3F3B-209ENST00000589949 ASAP1Q9ULH1 1129 aa24.73■■□□□ 1.55
H3F3B-209ENST00000589949 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
H3F3B-209ENST00000589949 MSH5O43196 834 aa24.72■■□□□ 1.55
H3F3B-209ENST00000589949 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
H3F3B-209ENST00000589949 IFNL2Q8IZJ0 200 aa24.72■■□□□ 1.55
H3F3B-209ENST00000589949 SMARCC1Q92922 1105 aaPredicted RBP24.72■■□□□ 1.55
H3F3B-209ENST00000589949 KLHL34Q8N239 644 aa24.71■■□□□ 1.55
H3F3B-209ENST00000589949 NLGN2Q8NFZ4 835 aa24.71■■□□□ 1.55
H3F3B-209ENST00000589949 C4BP0C0L5 1744 aa24.71■■□□□ 1.55
H3F3B-209ENST00000589949 AMER1Q5JTC6 1135 aaPredicted RBP24.7■■□□□ 1.54
H3F3B-209ENST00000589949 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
H3F3B-209ENST00000589949 TMOD3Q9NYL9 352 aa24.7■■□□□ 1.54
H3F3B-209ENST00000589949 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
H3F3B-209ENST00000589949 LOC102724428A0A0B4J2F2 783 aa24.68■■□□□ 1.54
H3F3B-209ENST00000589949 SIK1P57059 783 aa24.68■■□□□ 1.54
H3F3B-209ENST00000589949 ITPK1Q13572 414 aa24.68■■□□□ 1.54
H3F3B-209ENST00000589949 ATG3Q9NT62 314 aa24.68■■□□□ 1.54
H3F3B-209ENST00000589949 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
H3F3B-209ENST00000589949 PLEKHG2Q9H7P9 1386 aa24.66■■□□□ 1.54
H3F3B-209ENST00000589949 GOLGB1Q14789 3259 aaKnown RBP24.65■■□□□ 1.54
H3F3B-209ENST00000589949 UBR3Q6ZT12 1888 aa24.65■■□□□ 1.54
H3F3B-209ENST00000589949 KDM6AO15550 1401 aaPredicted RBP24.64■■□□□ 1.54
H3F3B-209ENST00000589949 IL13P35225 146 aa24.64■■□□□ 1.54
H3F3B-209ENST00000589949 AK7Q96M32 723 aa24.64■■□□□ 1.54
H3F3B-209ENST00000589949 SLC4A9Q96Q91 983 aa24.64■■□□□ 1.54
H3F3B-209ENST00000589949 PER1O15534 1290 aaPredicted RBP24.63■■□□□ 1.53
H3F3B-209ENST00000589949 PHF14O94880 888 aa24.63■■□□□ 1.53
H3F3B-209ENST00000589949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
H3F3B-209ENST00000589949 GPR162Q16538 588 aa24.62■■□□□ 1.53
H3F3B-209ENST00000589949 PLEKHO1Q53GL0 409 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms