RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 DOT1LQ8TEK3 1739 aa26.02■■□□□ 1.76
LSM14A-207ENST00000589878 A0A1W2PP64 1363 aa26.02■■□□□ 1.76
LSM14A-207ENST00000589878 FAM208AQ9UK61 1670 aaKnown RBP26■■□□□ 1.75
LSM14A-207ENST00000589878 ANKRD36BQ8N2N9 1353 aa26■■□□□ 1.75
LSM14A-207ENST00000589878 FBLN1P23142 703 aa26■■□□□ 1.75
LSM14A-207ENST00000589878 RGPD2P0DJD1 1756 aa26■■□□□ 1.75
LSM14A-207ENST00000589878 LY75O60449 1722 aa25.99■■□□□ 1.75
LSM14A-207ENST00000589878 ZCRB1Q8TBF4 217 aaKnown RBP25.98■■□□□ 1.75
LSM14A-207ENST00000589878 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
LSM14A-207ENST00000589878 YBX3P16989 372 aaKnown RBP eCLIP25.97■■□□□ 1.75
LSM14A-207ENST00000589878 AMPHP49418 695 aa25.97■■□□□ 1.75
LSM14A-207ENST00000589878 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
LSM14A-207ENST00000589878 NSD2O96028 1365 aa25.96■■□□□ 1.75
LSM14A-207ENST00000589878 HOXC9P31274 260 aa25.96■■□□□ 1.75
LSM14A-207ENST00000589878 MAP3K19Q56UN5 1328 aa25.95■■□□□ 1.75
LSM14A-207ENST00000589878 MSL1Q68DK7 614 aa25.95■■□□□ 1.74
LSM14A-207ENST00000589878 COL23A1Q86Y22 540 aaPredicted RBP25.95■■□□□ 1.74
LSM14A-207ENST00000589878 COG3Q96JB2 828 aa25.95■■□□□ 1.74
LSM14A-207ENST00000589878 GRIN3BO60391 1043 aa25.93■■□□□ 1.74
LSM14A-207ENST00000589878 MEGF6O75095 1541 aa25.92■■□□□ 1.74
LSM14A-207ENST00000589878 USP47Q96K76 1375 aa25.91■■□□□ 1.74
LSM14A-207ENST00000589878 USHBP1Q8N6Y0 703 aa25.9■■□□□ 1.74
LSM14A-207ENST00000589878 NBPF6Q5VWK0 638 aa25.88■■□□□ 1.73
LSM14A-207ENST00000589878 NBPF4Q96M43 638 aa25.88■■□□□ 1.73
LSM14A-207ENST00000589878 CEP350Q5VT06 3117 aa25.88■■□□□ 1.73
LSM14A-207ENST00000589878 IFFO2Q5TF58 517 aa25.87■■□□□ 1.73
LSM14A-207ENST00000589878 PUS7Q96PZ0 661 aaKnown RBP25.87■■□□□ 1.73
LSM14A-207ENST00000589878 RRS1Q15050 365 aaKnown RBP25.86■■□□□ 1.73
LSM14A-207ENST00000589878 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
LSM14A-207ENST00000589878 ATP10DQ9P241 1426 aa25.84■■□□□ 1.73
LSM14A-207ENST00000589878 C5P01031 1676 aa25.83■■□□□ 1.73
LSM14A-207ENST00000589878 ST20-MTHFSA0A0A6YYL1 179 aa25.81■■□□□ 1.72
LSM14A-207ENST00000589878 TATP17735 454 aaPredicted RBP25.81■■□□□ 1.72
LSM14A-207ENST00000589878 ZNF526Q8TF50 670 aaPredicted RBP25.81■■□□□ 1.72
LSM14A-207ENST00000589878 MPRIPQ6WCQ1 1025 aa25.8■■□□□ 1.72
LSM14A-207ENST00000589878 TESK2Q96S53 571 aa25.8■■□□□ 1.72
LSM14A-207ENST00000589878 GGNBP2Q9H3C7 697 aa25.8■■□□□ 1.72
LSM14A-207ENST00000589878 CD2APQ9Y5K6 639 aa25.8■■□□□ 1.72
LSM14A-207ENST00000589878 GPBP1L1Q9HC44 474 aaPredicted RBP25.79■■□□□ 1.72
LSM14A-207ENST00000589878 WWC3Q9ULE0 1092 aa25.79■■□□□ 1.72
LSM14A-207ENST00000589878 TAF1LQ8IZX4 1826 aa25.79■■□□□ 1.72
LSM14A-207ENST00000589878 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
LSM14A-207ENST00000589878 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
LSM14A-207ENST00000589878 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
LSM14A-207ENST00000589878 SMIM5Q71RC9 77 aa25.77■■□□□ 1.72
LSM14A-207ENST00000589878 FLAD1Q8NFF5 587 aa25.77■■□□□ 1.72
LSM14A-207ENST00000589878 PALLDQ8WX93 1383 aa25.77■■□□□ 1.72
LSM14A-207ENST00000589878 SMG6Q86US8 1419 aaKnown RBP25.77■■□□□ 1.72
LSM14A-207ENST00000589878 FYB1O15117 783 aa25.76■■□□□ 1.71
LSM14A-207ENST00000589878 HSP90AB2PQ58FF8 381 aa25.75■■□□□ 1.71
LSM14A-207ENST00000589878 PCDH11XQ9BZA7 1347 aa25.74■■□□□ 1.71
LSM14A-207ENST00000589878 PCDH11YQ9BZA8 1340 aa25.74■■□□□ 1.71
LSM14A-207ENST00000589878 PHF14O94880 888 aa25.74■■□□□ 1.71
LSM14A-207ENST00000589878 AK7Q96M32 723 aa25.74■■□□□ 1.71
LSM14A-207ENST00000589878 AMIGO3Q86WK7 504 aa25.73■■□□□ 1.71
LSM14A-207ENST00000589878 ITGB4P16144 1822 aa25.72■■□□□ 1.71
LSM14A-207ENST00000589878 C4BP0C0L5 1744 aa25.72■■□□□ 1.71
LSM14A-207ENST00000589878 CYP27B1O15528 508 aa25.71■■□□□ 1.71
LSM14A-207ENST00000589878 IGSF1Q8N6C5 1336 aa25.7■■□□□ 1.71
LSM14A-207ENST00000589878 HMGB2P26583 209 aaKnown RBP25.7■■□□□ 1.7
LSM14A-207ENST00000589878 TOGARAM1Q9Y4F4 1720 aa25.69■■□□□ 1.7
LSM14A-207ENST00000589878 SMARCC1Q92922 1105 aaPredicted RBP25.69■■□□□ 1.7
LSM14A-207ENST00000589878 INSRP06213 1382 aa25.69■■□□□ 1.7
LSM14A-207ENST00000589878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
LSM14A-207ENST00000589878 HSPA6P17066 643 aa25.68■■□□□ 1.7
LSM14A-207ENST00000589878 ADCY9O60503 1353 aa25.68■■□□□ 1.7
LSM14A-207ENST00000589878 SLC24A1O60721 1099 aa25.67■■□□□ 1.7
LSM14A-207ENST00000589878 UBR3Q6ZT12 1888 aa25.67■■□□□ 1.7
LSM14A-207ENST00000589878 PIGBQ92521 554 aa25.66■■□□□ 1.7
LSM14A-207ENST00000589878 FLT4P35916 1363 aa25.65■■□□□ 1.7
LSM14A-207ENST00000589878 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
LSM14A-207ENST00000589878 TMF1P82094 1093 aa25.63■■□□□ 1.69
LSM14A-207ENST00000589878 PPM1GO15355 546 aaPredicted RBP25.62■■□□□ 1.69
LSM14A-207ENST00000589878 LINC00116Q8NCU8 138 aa25.62■■□□□ 1.69
LSM14A-207ENST00000589878 EMILIN1Q9Y6C2 1016 aa25.62■■□□□ 1.69
LSM14A-207ENST00000589878 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
LSM14A-207ENST00000589878 LOC102724428A0A0B4J2F2 783 aa25.6■■□□□ 1.69
LSM14A-207ENST00000589878 SSFA2P28290 1259 aa25.6■■□□□ 1.69
LSM14A-207ENST00000589878 SIK1P57059 783 aa25.6■■□□□ 1.69
LSM14A-207ENST00000589878 SPG7Q9UQ90 795 aa25.59■■□□□ 1.69
LSM14A-207ENST00000589878 NSD3Q9BZ95 1437 aa25.59■■□□□ 1.69
LSM14A-207ENST00000589878 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.69
LSM14A-207ENST00000589878 GNPATO15228 680 aa25.58■■□□□ 1.69
LSM14A-207ENST00000589878 ASAP1Q9ULH1 1129 aa25.58■■□□□ 1.69
LSM14A-207ENST00000589878 KIF24Q5T7B8 1368 aa25.57■■□□□ 1.68
LSM14A-207ENST00000589878 KIF3CO14782 793 aa25.57■■□□□ 1.68
LSM14A-207ENST00000589878 ITPK1Q13572 414 aa25.57■■□□□ 1.68
LSM14A-207ENST00000589878 NKX1-1Q15270 411 aaPredicted RBP25.57■■□□□ 1.68
LSM14A-207ENST00000589878 TMOD3Q9NYL9 352 aa25.57■■□□□ 1.68
LSM14A-207ENST00000589878 ATP6V1AP38606 617 aa25.56■■□□□ 1.68
LSM14A-207ENST00000589878 MMP10P09238 476 aa25.54■■□□□ 1.68
LSM14A-207ENST00000589878 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
LSM14A-207ENST00000589878 N4BP2Q86UW6 1770 aaPredicted RBP25.52■■□□□ 1.68
LSM14A-207ENST00000589878 EYA1Q99502 592 aa25.51■■□□□ 1.67
LSM14A-207ENST00000589878 BCS1LQ9Y276 419 aa25.51■■□□□ 1.67
LSM14A-207ENST00000589878 ATG3Q9NT62 314 aa25.5■■□□□ 1.67
LSM14A-207ENST00000589878 A0A0G2JLW4 131 aa25.49■■□□□ 1.67
LSM14A-207ENST00000589878 CDCA8Q53HL2 280 aa25.49■■□□□ 1.67
LSM14A-207ENST00000589878 IFNL2Q8IZJ0 200 aa25.49■■□□□ 1.67
LSM14A-207ENST00000589878 PXDNLA1KZ92 1463 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms