RNA–Protein interactions for RNA: ENST00000589799.5

ZNF235-204, Transcript of zinc finger protein 235, humanhuman

TSL 1 (best) BASIC

Gene ZNF235, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-204ENST00000589799 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
ZNF235-204ENST00000589799 SOS2Q07890 1332 aaPredicted RBP9.76□□□□□ -0.85
ZNF235-204ENST00000589799 MYOM2P54296 1465 aa9.75□□□□□ -0.85
ZNF235-204ENST00000589799 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
ZNF235-204ENST00000589799 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
ZNF235-204ENST00000589799 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
ZNF235-204ENST00000589799 DEFB132Q7Z7B7 95 aa9.75□□□□□ -0.85
ZNF235-204ENST00000589799 TTC13Q8NBP0 860 aa9.75□□□□□ -0.85
ZNF235-204ENST00000589799 BCL9LQ86UU0 1499 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
ZNF235-204ENST00000589799 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
ZNF235-204ENST00000589799 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
ZNF235-204ENST00000589799 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 GJD4Q96KN9 370 aaPredicted RBP9.74□□□□□ -0.85
ZNF235-204ENST00000589799 ORAI2Q96SN7 254 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 POLR3EQ9NVU0 708 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 GLI3P10071 1580 aa9.74□□□□□ -0.85
ZNF235-204ENST00000589799 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
ZNF235-204ENST00000589799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
ZNF235-204ENST00000589799 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
ZNF235-204ENST00000589799 ARID3AQ99856 593 aa9.72□□□□□ -0.85
ZNF235-204ENST00000589799 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
ZNF235-204ENST00000589799 KIF1BO60333 1816 aa9.71□□□□□ -0.85
ZNF235-204ENST00000589799 MCM6Q14566 821 aa9.71□□□□□ -0.86
ZNF235-204ENST00000589799 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
ZNF235-204ENST00000589799 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
ZNF235-204ENST00000589799 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
ZNF235-204ENST00000589799 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
ZNF235-204ENST00000589799 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.86
ZNF235-204ENST00000589799 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 APBB1O00213 710 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 PTPREP23469 700 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
ZNF235-204ENST00000589799 NUP155O75694 1391 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 PXDNQ92626 1479 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 PLCH1Q4KWH8 1693 aa9.7□□□□□ -0.86
ZNF235-204ENST00000589799 A6NJR5 290 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 CLTCL1P53675 1640 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 XPCQ01831 940 aaPredicted RBP9.69□□□□□ -0.86
ZNF235-204ENST00000589799 SULF1Q8IWU6 871 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 TBC1D2Q9BYX2 928 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 ROBO2Q9HCK4 1378 aa9.69□□□□□ -0.86
ZNF235-204ENST00000589799 RCCD1A6NED2 376 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 ESCO1Q5FWF5 840 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 UNC5CLQ8IV45 518 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 RGPD1P0DJD0 1748 aa9.68□□□□□ -0.86
ZNF235-204ENST00000589799 SLIT2O94813 1529 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 A0A0G2JS52 829 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 RAD21O60216 631 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 COL9A1P20849 921 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 HRCP23327 699 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 BAG6P46379 1132 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 MYT1Q01538 1121 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 CCDC9Q9Y3X0 531 aaKnown RBP9.67□□□□□ -0.86
ZNF235-204ENST00000589799 NWD2Q9ULI1 1742 aa9.67□□□□□ -0.86
ZNF235-204ENST00000589799 HFM1A2PYH4 1435 aa9.66□□□□□ -0.86
ZNF235-204ENST00000589799 LRPPRCP42704 1394 aaKnown RBP9.66□□□□□ -0.86
ZNF235-204ENST00000589799 FOXO3O43524 673 aa9.66□□□□□ -0.86
ZNF235-204ENST00000589799 POTEJP0CG39 1038 aa9.66□□□□□ -0.86
ZNF235-204ENST00000589799 DNAJB2P25686 324 aa9.66□□□□□ -0.86
ZNF235-204ENST00000589799 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
ZNF235-204ENST00000589799 KIF1AQ12756 1690 aa9.66□□□□□ -0.86
ZNF235-204ENST00000589799 LOC105371045A0A1W2PR82 267 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 SNPHO15079 494 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 TRAK2O60296 914 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 NUDT18Q6ZVK8 323 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 KRT27Q7Z3Y8 459 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
ZNF235-204ENST00000589799 ABCA3Q99758 1704 aa9.65□□□□□ -0.87
ZNF235-204ENST00000589799 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.87
ZNF235-204ENST00000589799 ROCK1Q13464 1354 aa9.64□□□□□ -0.87
ZNF235-204ENST00000589799 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
ZNF235-204ENST00000589799 EYA1Q99502 592 aa9.64□□□□□ -0.87
ZNF235-204ENST00000589799 TSKSQ9UJT2 592 aa9.64□□□□□ -0.87
ZNF235-204ENST00000589799 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
ZNF235-204ENST00000589799 SPDYE5A6NIY4 337 aa9.63□□□□□ -0.87
ZNF235-204ENST00000589799 DDX11L8A8MPP1 907 aa9.63□□□□□ -0.87
ZNF235-204ENST00000589799 YY1P25490 414 aa9.63□□□□□ -0.87
ZNF235-204ENST00000589799 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
ZNF235-204ENST00000589799 CCDC144AA2RUR9 1427 aa9.63□□□□□ -0.87
ZNF235-204ENST00000589799 PPLO60437 1756 aa9.63□□□□□ -0.87
ZNF235-204ENST00000589799 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
ZNF235-204ENST00000589799 FMN2Q9NZ56 1722 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 TRIM6-TRIM34B2RNG4 842 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 CD46P15529 392 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 RFC5P40937 340 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 VPS72Q15906 364 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
ZNF235-204ENST00000589799 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms