RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 NHSQ6T4R5 1651 aa22.68■■□□□ 1.22
AC040963.1-202ENST00000589729 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
AC040963.1-202ENST00000589729 RAPGEF4Q8WZA2 1011 aa22.67■■□□□ 1.22
AC040963.1-202ENST00000589729 TRIM37O94972 964 aa22.66■■□□□ 1.22
AC040963.1-202ENST00000589729 TATP17735 454 aaPredicted RBP22.65■■□□□ 1.22
AC040963.1-202ENST00000589729 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
AC040963.1-202ENST00000589729 DEFB132Q7Z7B7 95 aa22.64■■□□□ 1.21
AC040963.1-202ENST00000589729 KAT6BQ8WYB5 2073 aa22.63■■□□□ 1.21
AC040963.1-202ENST00000589729 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
AC040963.1-202ENST00000589729 HMOX1P09601 288 aa22.63■■□□□ 1.21
AC040963.1-202ENST00000589729 SULT6B1Q6IMI4 303 aa22.63■■□□□ 1.21
AC040963.1-202ENST00000589729 ZCRB1Q8TBF4 217 aaKnown RBP22.63■■□□□ 1.21
AC040963.1-202ENST00000589729 BTAF1O14981 1849 aa22.62■■□□□ 1.21
AC040963.1-202ENST00000589729 ACSBG1Q96GR2 724 aa22.62■■□□□ 1.21
AC040963.1-202ENST00000589729 KDRP35968 1356 aa22.61■■□□□ 1.21
AC040963.1-202ENST00000589729 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
AC040963.1-202ENST00000589729 CYP27B1O15528 508 aa22.59■■□□□ 1.21
AC040963.1-202ENST00000589729 KCNQ2O43526 872 aa22.59■■□□□ 1.21
AC040963.1-202ENST00000589729 BCL9O00512 1426 aa22.58■■□□□ 1.21
AC040963.1-202ENST00000589729 ITGB4P16144 1822 aa22.58■■□□□ 1.21
AC040963.1-202ENST00000589729 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
AC040963.1-202ENST00000589729 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
AC040963.1-202ENST00000589729 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
AC040963.1-202ENST00000589729 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
AC040963.1-202ENST00000589729 RREB1Q92766 1687 aa22.56■■□□□ 1.2
AC040963.1-202ENST00000589729 RALBP1Q15311 655 aa22.56■■□□□ 1.2
AC040963.1-202ENST00000589729 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
AC040963.1-202ENST00000589729 MYBBP1AQ9BQG0 1328 aaKnown RBP22.56■■□□□ 1.2
AC040963.1-202ENST00000589729 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
AC040963.1-202ENST00000589729 EN1Q05925 392 aaPredicted RBP22.54■■□□□ 1.2
AC040963.1-202ENST00000589729 SF3B2Q13435 895 aaKnown RBP22.54■■□□□ 1.2
AC040963.1-202ENST00000589729 APBA3O96018 575 aa22.53■■□□□ 1.2
AC040963.1-202ENST00000589729 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
AC040963.1-202ENST00000589729 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
AC040963.1-202ENST00000589729 SPG7Q9UQ90 795 aa22.52■■□□□ 1.2
AC040963.1-202ENST00000589729 ZNF530Q6P9A1 599 aaPredicted RBP22.51■■□□□ 1.19
AC040963.1-202ENST00000589729 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
AC040963.1-202ENST00000589729 PHKG2P15735 406 aa22.5■■□□□ 1.19
AC040963.1-202ENST00000589729 EZH2Q15910 746 aaKnown RBP22.5■■□□□ 1.19
AC040963.1-202ENST00000589729 CCDC125Q86Z20 511 aa22.5■■□□□ 1.19
AC040963.1-202ENST00000589729 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
AC040963.1-202ENST00000589729 SCN11AQ9UI33 1791 aa22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 BAG6P46379 1132 aa22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 BCL11BQ9C0K0 894 aaPredicted RBP22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 RSPH6AQ9H0K4 717 aa22.49■■□□□ 1.19
AC040963.1-202ENST00000589729 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
AC040963.1-202ENST00000589729 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
AC040963.1-202ENST00000589729 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
AC040963.1-202ENST00000589729 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
AC040963.1-202ENST00000589729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
AC040963.1-202ENST00000589729 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 PHACTR3Q96KR7 559 aa22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 CAMKK2Q96RR4 588 aa22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 PLEKHG2Q9H7P9 1386 aa22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 LY75O60449 1722 aa22.45■■□□□ 1.18
AC040963.1-202ENST00000589729 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
AC040963.1-202ENST00000589729 DLG5Q8TDM6 1919 aa22.44■■□□□ 1.18
AC040963.1-202ENST00000589729 ADAMTS7Q9UKP4 1686 aa22.43■■□□□ 1.18
AC040963.1-202ENST00000589729 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
AC040963.1-202ENST00000589729 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
AC040963.1-202ENST00000589729 C1orf141Q5JVX7 400 aa22.41■■□□□ 1.18
AC040963.1-202ENST00000589729 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
AC040963.1-202ENST00000589729 PAPPAQ13219 1627 aa22.4■■□□□ 1.18
AC040963.1-202ENST00000589729 KCNQ4P56696 695 aa22.39■■□□□ 1.17
AC040963.1-202ENST00000589729 ANP32CO43423 234 aa22.38■■□□□ 1.17
AC040963.1-202ENST00000589729 PROM2Q8N271 834 aa22.38■■□□□ 1.17
AC040963.1-202ENST00000589729 PIGBQ92521 554 aa22.38■■□□□ 1.17
AC040963.1-202ENST00000589729 MRC1P22897 1456 aa22.38■■□□□ 1.17
AC040963.1-202ENST00000589729 SIPA1L3O60292 1781 aaPredicted RBP22.37■■□□□ 1.17
AC040963.1-202ENST00000589729 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
AC040963.1-202ENST00000589729 AKAP4Q5JQC9 854 aa22.36■■□□□ 1.17
AC040963.1-202ENST00000589729 LGR6Q9HBX8 967 aa22.36■■□□□ 1.17
AC040963.1-202ENST00000589729 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
AC040963.1-202ENST00000589729 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 DCAF5Q96JK2 942 aa22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 TMOD3Q9NYL9 352 aa22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 C5P01031 1676 aa22.35■■□□□ 1.17
AC040963.1-202ENST00000589729 TAF1LQ8IZX4 1826 aa22.34■■□□□ 1.17
AC040963.1-202ENST00000589729 PLSCR1O15162 318 aa22.34■■□□□ 1.17
AC040963.1-202ENST00000589729 FCHSD2O94868 740 aa22.34■■□□□ 1.17
AC040963.1-202ENST00000589729 TXNRD1Q16881 649 aa22.34■■□□□ 1.17
AC040963.1-202ENST00000589729 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
AC040963.1-202ENST00000589729 PSDA5PKW4 1024 aaPredicted RBP22.33■■□□□ 1.17
AC040963.1-202ENST00000589729 LRRC4BQ9NT99 713 aa22.33■■□□□ 1.17
AC040963.1-202ENST00000589729 ASAP1Q9ULH1 1129 aa22.33■■□□□ 1.17
AC040963.1-202ENST00000589729 RNMTO43148 476 aaKnown RBP22.32■■□□□ 1.16
AC040963.1-202ENST00000589729 HSP90AB1P08238 724 aaKnown RBP22.32■■□□□ 1.16
AC040963.1-202ENST00000589729 GAS2L2Q8NHY3 880 aa22.32■■□□□ 1.16
AC040963.1-202ENST00000589729 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.16
AC040963.1-202ENST00000589729 ADAMTS8Q9UP79 889 aa22.3■■□□□ 1.16
AC040963.1-202ENST00000589729 CABP4P57796 275 aa22.29■■□□□ 1.16
AC040963.1-202ENST00000589729 DCTN1Q14203 1278 aa22.29■■□□□ 1.16
AC040963.1-202ENST00000589729 ATG3Q9NT62 314 aa22.29■■□□□ 1.16
AC040963.1-202ENST00000589729 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
AC040963.1-202ENST00000589729 GNAT3A8MTJ3 354 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms