RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
GFAP-216ENST00000589701 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
GFAP-216ENST00000589701 NLRP6P59044 892 aa13.82□□□□□ -0.2
GFAP-216ENST00000589701 CHMP4BQ9H444 224 aaKnown RBP13.82□□□□□ -0.2
GFAP-216ENST00000589701 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
GFAP-216ENST00000589701 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
GFAP-216ENST00000589701 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
GFAP-216ENST00000589701 USP6P35125 1406 aa13.81□□□□□ -0.2
GFAP-216ENST00000589701 STRCP1A6NGW2 1772 aa13.81□□□□□ -0.2
GFAP-216ENST00000589701 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
GFAP-216ENST00000589701 AATKQ6ZMQ8 1374 aa13.81□□□□□ -0.2
GFAP-216ENST00000589701 AMPHP49418 695 aa13.8□□□□□ -0.2
GFAP-216ENST00000589701 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
GFAP-216ENST00000589701 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
GFAP-216ENST00000589701 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
GFAP-216ENST00000589701 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
GFAP-216ENST00000589701 PEAK1Q9H792 1746 aa13.79□□□□□ -0.2
GFAP-216ENST00000589701 PLEKHG3A1L390 1219 aa13.79□□□□□ -0.2
GFAP-216ENST00000589701 PIP4K2BP78356 416 aa13.79□□□□□ -0.2
GFAP-216ENST00000589701 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
GFAP-216ENST00000589701 AKAP12Q02952 1782 aa13.79□□□□□ -0.2
GFAP-216ENST00000589701 F6X3S4 739 aa13.78□□□□□ -0.2
GFAP-216ENST00000589701 EYA1Q99502 592 aa13.78□□□□□ -0.2
GFAP-216ENST00000589701 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.2
GFAP-216ENST00000589701 OVOS2A0A0J9YW53 1432 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 OVOS2Q6IE36 1432 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 G2E3Q7L622 706 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 TBC1D32Q96NH3 1257 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 VIRMAQ69YN4 1812 aaKnown RBP13.77□□□□□ -0.21
GFAP-216ENST00000589701 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 TBC1D2Q9BYX2 928 aa13.77□□□□□ -0.21
GFAP-216ENST00000589701 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
GFAP-216ENST00000589701 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
GFAP-216ENST00000589701 HSPA1LP34931 641 aa13.76□□□□□ -0.21
GFAP-216ENST00000589701 NUCB1Q02818 461 aa13.76□□□□□ -0.21
GFAP-216ENST00000589701 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
GFAP-216ENST00000589701 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
GFAP-216ENST00000589701 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
GFAP-216ENST00000589701 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
GFAP-216ENST00000589701 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
GFAP-216ENST00000589701 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 ZNF428Q96B54 188 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 MEIS3Q99687 375 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 ABCC4O15439 1325 aa13.74□□□□□ -0.21
GFAP-216ENST00000589701 CHL1O00533 1208 aa13.73□□□□□ -0.21
GFAP-216ENST00000589701 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
GFAP-216ENST00000589701 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
GFAP-216ENST00000589701 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
GFAP-216ENST00000589701 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
GFAP-216ENST00000589701 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
GFAP-216ENST00000589701 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
GFAP-216ENST00000589701 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
GFAP-216ENST00000589701 SOCS7O14512 581 aa13.71□□□□□ -0.21
GFAP-216ENST00000589701 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
GFAP-216ENST00000589701 ESCO1Q5FWF5 840 aa13.71□□□□□ -0.22
GFAP-216ENST00000589701 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
GFAP-216ENST00000589701 MSH6P52701 1360 aa13.71□□□□□ -0.22
GFAP-216ENST00000589701 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
GFAP-216ENST00000589701 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
GFAP-216ENST00000589701 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 HOXC9P31274 260 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 TSHZ3Q63HK5 1081 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 FAM43AQ8N2R8 423 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
GFAP-216ENST00000589701 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
GFAP-216ENST00000589701 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
GFAP-216ENST00000589701 ARHGAP45Q92619 1136 aa13.69□□□□□ -0.22
GFAP-216ENST00000589701 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
GFAP-216ENST00000589701 USP31Q70CQ4 1352 aa13.69□□□□□ -0.22
GFAP-216ENST00000589701 BECN1Q14457 450 aa13.68□□□□□ -0.22
GFAP-216ENST00000589701 ORAI2Q96SN7 254 aa13.68□□□□□ -0.22
GFAP-216ENST00000589701 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
GFAP-216ENST00000589701 FLT4P35916 1363 aa13.68□□□□□ -0.22
GFAP-216ENST00000589701 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
GFAP-216ENST00000589701 CRB1P82279 1406 aa13.68□□□□□ -0.22
GFAP-216ENST00000589701 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
GFAP-216ENST00000589701 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 PIK3C2AO00443 1686 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 RGS12O14924 1447 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 GSPT1P15170 499 aaKnown RBP13.67□□□□□ -0.22
GFAP-216ENST00000589701 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
GFAP-216ENST00000589701 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
GFAP-216ENST00000589701 ANXA1P04083 346 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 GSE1Q14687 1217 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 ANTXR1Q9H6X2 564 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 PSME1Q06323 249 aa13.66□□□□□ -0.22
GFAP-216ENST00000589701 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms