RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
H3F3B-208ENST00000589599 KCNQ2O43526 872 aa22.94■■□□□ 1.26
H3F3B-208ENST00000589599 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
H3F3B-208ENST00000589599 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
H3F3B-208ENST00000589599 MTHFSP49914 203 aa22.92■■□□□ 1.26
H3F3B-208ENST00000589599 NBPF14Q5TI25 921 aa22.92■■□□□ 1.26
H3F3B-208ENST00000589599 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
H3F3B-208ENST00000589599 PCDH11XQ9BZA7 1347 aa22.91■■□□□ 1.26
H3F3B-208ENST00000589599 PCDH11YQ9BZA8 1340 aa22.91■■□□□ 1.26
H3F3B-208ENST00000589599 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
H3F3B-208ENST00000589599 NCAPD2Q15021 1401 aa22.9■■□□□ 1.26
H3F3B-208ENST00000589599 SYTL4Q96C24 671 aaPredicted RBP22.89■■□□□ 1.25
H3F3B-208ENST00000589599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.89■■□□□ 1.25
H3F3B-208ENST00000589599 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
H3F3B-208ENST00000589599 PRIM1P49642 420 aaKnown RBP22.88■■□□□ 1.25
H3F3B-208ENST00000589599 IGSF1Q8N6C5 1336 aa22.87■■□□□ 1.25
H3F3B-208ENST00000589599 PSDA5PKW4 1024 aaPredicted RBP22.87■■□□□ 1.25
H3F3B-208ENST00000589599 IL13P35225 146 aa22.86■■□□□ 1.25
H3F3B-208ENST00000589599 R3HDM1Q15032 1099 aaKnown RBP22.86■■□□□ 1.25
H3F3B-208ENST00000589599 TXNRD1Q16881 649 aa22.85■■□□□ 1.25
H3F3B-208ENST00000589599 CYP27B1O15528 508 aa22.84■■□□□ 1.25
H3F3B-208ENST00000589599 PROM2Q8N271 834 aa22.83■■□□□ 1.25
H3F3B-208ENST00000589599 NHSQ6T4R5 1651 aa22.83■■□□□ 1.24
H3F3B-208ENST00000589599 PLEKHG2Q9H7P9 1386 aa22.82■■□□□ 1.24
H3F3B-208ENST00000589599 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
H3F3B-208ENST00000589599 PLEKHO1Q53GL0 409 aaPredicted RBP22.82■■□□□ 1.24
H3F3B-208ENST00000589599 SULT6B1Q6IMI4 303 aa22.82■■□□□ 1.24
H3F3B-208ENST00000589599 AMOTQ4VCS5 1084 aa22.81■■□□□ 1.24
H3F3B-208ENST00000589599 IFNL2Q8IZJ0 200 aa22.81■■□□□ 1.24
H3F3B-208ENST00000589599 NKX1-1Q15270 411 aaPredicted RBP22.8■■□□□ 1.24
H3F3B-208ENST00000589599 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
H3F3B-208ENST00000589599 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
H3F3B-208ENST00000589599 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
H3F3B-208ENST00000589599 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
H3F3B-208ENST00000589599 PHKG2P15735 406 aa22.78■■□□□ 1.24
H3F3B-208ENST00000589599 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
H3F3B-208ENST00000589599 RREB1Q92766 1687 aa22.77■■□□□ 1.24
H3F3B-208ENST00000589599 SHANK3Q9BYB0 1731 aa22.77■■□□□ 1.24
H3F3B-208ENST00000589599 MPRIPQ6WCQ1 1025 aa22.77■■□□□ 1.24
H3F3B-208ENST00000589599 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
H3F3B-208ENST00000589599 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
H3F3B-208ENST00000589599 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
H3F3B-208ENST00000589599 ZNF530Q6P9A1 599 aaPredicted RBP22.75■■□□□ 1.23
H3F3B-208ENST00000589599 KDRP35968 1356 aa22.75■■□□□ 1.23
H3F3B-208ENST00000589599 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
H3F3B-208ENST00000589599 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
H3F3B-208ENST00000589599 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
H3F3B-208ENST00000589599 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
H3F3B-208ENST00000589599 BTAF1O14981 1849 aa22.73■■□□□ 1.23
H3F3B-208ENST00000589599 U2SURPO15042 1029 aaKnown RBP22.73■■□□□ 1.23
H3F3B-208ENST00000589599 HMOX1P09601 288 aa22.73■■□□□ 1.23
H3F3B-208ENST00000589599 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
H3F3B-208ENST00000589599 C1orf141Q5JVX7 400 aa22.73■■□□□ 1.23
H3F3B-208ENST00000589599 ANO8Q9HCE9 1232 aaPredicted RBP22.72■■□□□ 1.23
H3F3B-208ENST00000589599 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
H3F3B-208ENST00000589599 HMGB2P26583 209 aaKnown RBP22.71■■□□□ 1.23
H3F3B-208ENST00000589599 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
H3F3B-208ENST00000589599 SMARCC1Q92922 1105 aaPredicted RBP22.71■■□□□ 1.23
H3F3B-208ENST00000589599 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
H3F3B-208ENST00000589599 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
H3F3B-208ENST00000589599 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
H3F3B-208ENST00000589599 PIGBQ92521 554 aa22.7■■□□□ 1.22
H3F3B-208ENST00000589599 LRRC4BQ9NT99 713 aa22.7■■□□□ 1.22
H3F3B-208ENST00000589599 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
H3F3B-208ENST00000589599 CCNL1Q9UK58 526 aaPredicted RBP22.69■■□□□ 1.22
H3F3B-208ENST00000589599 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
H3F3B-208ENST00000589599 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
H3F3B-208ENST00000589599 KCNQ4P56696 695 aa22.65■■□□□ 1.22
H3F3B-208ENST00000589599 CABP4P57796 275 aa22.65■■□□□ 1.22
H3F3B-208ENST00000589599 AKAP4Q5JQC9 854 aa22.65■■□□□ 1.22
H3F3B-208ENST00000589599 RALBP1Q15311 655 aa22.64■■□□□ 1.21
H3F3B-208ENST00000589599 SPON1Q9HCB6 807 aa22.63■■□□□ 1.21
H3F3B-208ENST00000589599 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
H3F3B-208ENST00000589599 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.21
H3F3B-208ENST00000589599 MTHFSDQ2M296 383 aaKnown RBP22.62■■□□□ 1.21
H3F3B-208ENST00000589599 AKT1S1Q96B36 256 aa22.62■■□□□ 1.21
H3F3B-208ENST00000589599 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
H3F3B-208ENST00000589599 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
H3F3B-208ENST00000589599 ASAP1Q9ULH1 1129 aa22.61■■□□□ 1.21
H3F3B-208ENST00000589599 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
H3F3B-208ENST00000589599 TOGARAM1Q9Y4F4 1720 aa22.6■■□□□ 1.21
H3F3B-208ENST00000589599 GAS2L2Q8NHY3 880 aa22.59■■□□□ 1.21
H3F3B-208ENST00000589599 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.21
H3F3B-208ENST00000589599 LOC102724428A0A0B4J2F2 783 aa22.58■■□□□ 1.21
H3F3B-208ENST00000589599 SIK1P57059 783 aa22.58■■□□□ 1.21
H3F3B-208ENST00000589599 NFATC2IPQ8NCF5 419 aa22.58■■□□□ 1.21
H3F3B-208ENST00000589599 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
H3F3B-208ENST00000589599 FCHSD2O94868 740 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 ZBTB7AO95365 584 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 RSPH6AQ9H0K4 717 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 ITGB4P16144 1822 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 LY75O60449 1722 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 LRP5O75197 1615 aa22.57■■□□□ 1.2
H3F3B-208ENST00000589599 PAPPAQ13219 1627 aa22.56■■□□□ 1.2
H3F3B-208ENST00000589599 RNMTO43148 476 aaKnown RBP22.55■■□□□ 1.2
H3F3B-208ENST00000589599 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
H3F3B-208ENST00000589599 PPP1R1BQ9UD71 204 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-208ENST00000589599 ATP6V1AP38606 617 aa22.54■■□□□ 1.2
H3F3B-208ENST00000589599 MTFR1LQ9H019 292 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms