RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 IFFO2Q5TF58 517 aa25.48■■□□□ 1.67
CXXC1-211ENST00000589548 NLGN2Q8NFZ4 835 aa25.48■■□□□ 1.67
CXXC1-211ENST00000589548 CEP350Q5VT06 3117 aa25.47■■□□□ 1.67
CXXC1-211ENST00000589548 POLD1P28340 1107 aa25.47■■□□□ 1.67
CXXC1-211ENST00000589548 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
CXXC1-211ENST00000589548 TERF2IPQ9NYB0 399 aa25.47■■□□□ 1.67
CXXC1-211ENST00000589548 SYTL4Q96C24 671 aaPredicted RBP25.46■■□□□ 1.67
CXXC1-211ENST00000589548 TFCP2L1Q9NZI6 479 aa25.46■■□□□ 1.67
CXXC1-211ENST00000589548 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
CXXC1-211ENST00000589548 FBLN1P23142 703 aa25.44■■□□□ 1.66
CXXC1-211ENST00000589548 PELP1Q8IZL8 1130 aaKnown RBP25.44■■□□□ 1.66
CXXC1-211ENST00000589548 C5P01031 1676 aa25.43■■□□□ 1.66
CXXC1-211ENST00000589548 HOXC9P31274 260 aa25.43■■□□□ 1.66
CXXC1-211ENST00000589548 GIGYF1O75420 1035 aaPredicted RBP25.42■■□□□ 1.66
CXXC1-211ENST00000589548 TAF1LQ8IZX4 1826 aa25.42■■□□□ 1.66
CXXC1-211ENST00000589548 PUS7Q96PZ0 661 aaKnown RBP25.41■■□□□ 1.66
CXXC1-211ENST00000589548 ZCRB1Q8TBF4 217 aaKnown RBP25.4■■□□□ 1.66
CXXC1-211ENST00000589548 YBX3P16989 372 aaKnown RBP eCLIP25.39■■□□□ 1.66
CXXC1-211ENST00000589548 CCNL1Q9UK58 526 aaPredicted RBP25.39■■□□□ 1.66
CXXC1-211ENST00000589548 COL23A1Q86Y22 540 aaPredicted RBP25.38■■□□□ 1.65
CXXC1-211ENST00000589548 COG3Q96JB2 828 aa25.37■■□□□ 1.65
CXXC1-211ENST00000589548 TESK2Q96S53 571 aa25.37■■□□□ 1.65
CXXC1-211ENST00000589548 AMPHP49418 695 aa25.36■■□□□ 1.65
CXXC1-211ENST00000589548 RTL1A6NKG5 1358 aa25.35■■□□□ 1.65
CXXC1-211ENST00000589548 TOGARAM1Q9Y4F4 1720 aa25.34■■□□□ 1.65
CXXC1-211ENST00000589548 USP47Q96K76 1375 aa25.34■■□□□ 1.65
CXXC1-211ENST00000589548 NBPF6Q5VWK0 638 aa25.34■■□□□ 1.65
CXXC1-211ENST00000589548 NBPF4Q96M43 638 aa25.34■■□□□ 1.65
CXXC1-211ENST00000589548 ITGB4P16144 1822 aa25.33■■□□□ 1.65
CXXC1-211ENST00000589548 MSL1Q68DK7 614 aa25.33■■□□□ 1.65
CXXC1-211ENST00000589548 USHBP1Q8N6Y0 703 aa25.33■■□□□ 1.65
CXXC1-211ENST00000589548 RRS1Q15050 365 aaKnown RBP25.32■■□□□ 1.64
CXXC1-211ENST00000589548 KIF20BQ96Q89 1820 aa25.31■■□□□ 1.64
CXXC1-211ENST00000589548 MSH5O43196 834 aa25.31■■□□□ 1.64
CXXC1-211ENST00000589548 ST20-MTHFSA0A0A6YYL1 179 aa25.29■■□□□ 1.64
CXXC1-211ENST00000589548 GRIN3BO60391 1043 aa25.29■■□□□ 1.64
CXXC1-211ENST00000589548 UBR3Q6ZT12 1888 aa25.29■■□□□ 1.64
CXXC1-211ENST00000589548 TONSLQ96HA7 1378 aa25.29■■□□□ 1.64
CXXC1-211ENST00000589548 C4BP0C0L5 1744 aa25.29■■□□□ 1.64
CXXC1-211ENST00000589548 ATP10DQ9P241 1426 aa25.28■■□□□ 1.64
CXXC1-211ENST00000589548 CGNL1Q0VF96 1302 aa25.27■■□□□ 1.64
CXXC1-211ENST00000589548 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
CXXC1-211ENST00000589548 FYB1O15117 783 aa25.25■■□□□ 1.63
CXXC1-211ENST00000589548 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
CXXC1-211ENST00000589548 PALLDQ8WX93 1383 aa25.25■■□□□ 1.63
CXXC1-211ENST00000589548 MAP2P11137 1827 aaKnown RBP25.24■■□□□ 1.63
CXXC1-211ENST00000589548 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
CXXC1-211ENST00000589548 RAPGEF4Q8WZA2 1011 aa25.24■■□□□ 1.63
CXXC1-211ENST00000589548 AMIGO3Q86WK7 504 aa25.23■■□□□ 1.63
CXXC1-211ENST00000589548 ADCY9O60503 1353 aa25.22■■□□□ 1.63
CXXC1-211ENST00000589548 PCDH11XQ9BZA7 1347 aa25.22■■□□□ 1.63
CXXC1-211ENST00000589548 PCDH11YQ9BZA8 1340 aa25.22■■□□□ 1.63
CXXC1-211ENST00000589548 CD2APQ9Y5K6 639 aa25.22■■□□□ 1.63
CXXC1-211ENST00000589548 INSRP06213 1382 aa25.21■■□□□ 1.63
CXXC1-211ENST00000589548 TATP17735 454 aaPredicted RBP25.21■■□□□ 1.63
CXXC1-211ENST00000589548 HSP90AB2PQ58FF8 381 aa25.21■■□□□ 1.63
CXXC1-211ENST00000589548 CYP27B1O15528 508 aa25.2■■□□□ 1.62
CXXC1-211ENST00000589548 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
CXXC1-211ENST00000589548 FLT4P35916 1363 aa25.18■■□□□ 1.62
CXXC1-211ENST00000589548 ANKRD26Q9UPS8 1709 aa25.17■■□□□ 1.62
CXXC1-211ENST00000589548 SMIM5Q71RC9 77 aa25.17■■□□□ 1.62
CXXC1-211ENST00000589548 FLAD1Q8NFF5 587 aa25.17■■□□□ 1.62
CXXC1-211ENST00000589548 NCAPD2Q15021 1401 aa25.15■■□□□ 1.62
CXXC1-211ENST00000589548 KIF24Q5T7B8 1368 aa25.15■■□□□ 1.62
CXXC1-211ENST00000589548 GPBP1L1Q9HC44 474 aaPredicted RBP25.13■■□□□ 1.61
CXXC1-211ENST00000589548 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
CXXC1-211ENST00000589548 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
CXXC1-211ENST00000589548 AK7Q96M32 723 aa25.12■■□□□ 1.61
CXXC1-211ENST00000589548 WWC3Q9ULE0 1092 aa25.12■■□□□ 1.61
CXXC1-211ENST00000589548 KIAA1551Q9HCM1 1747 aa25.12■■□□□ 1.61
CXXC1-211ENST00000589548 PHF14O94880 888 aa25.11■■□□□ 1.61
CXXC1-211ENST00000589548 ZNF526Q8TF50 670 aaPredicted RBP25.11■■□□□ 1.61
CXXC1-211ENST00000589548 PIGBQ92521 554 aa25.11■■□□□ 1.61
CXXC1-211ENST00000589548 SMARCC1Q92922 1105 aaPredicted RBP25.11■■□□□ 1.61
CXXC1-211ENST00000589548 EMILIN1Q9Y6C2 1016 aa25.11■■□□□ 1.61
CXXC1-211ENST00000589548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.1■■□□□ 1.61
CXXC1-211ENST00000589548 CICQ96RK0 1608 aaPredicted RBP25.1■■□□□ 1.61
CXXC1-211ENST00000589548 KIF13BQ9NQT8 1826 aa25.09■■□□□ 1.61
CXXC1-211ENST00000589548 HMGB2P26583 209 aaKnown RBP25.09■■□□□ 1.61
CXXC1-211ENST00000589548 TMF1P82094 1093 aa25.09■■□□□ 1.61
CXXC1-211ENST00000589548 LINC00116Q8NCU8 138 aa25.09■■□□□ 1.61
CXXC1-211ENST00000589548 NKX1-1Q15270 411 aaPredicted RBP25.08■■□□□ 1.61
CXXC1-211ENST00000589548 NSD3Q9BZ95 1437 aa25.08■■□□□ 1.61
CXXC1-211ENST00000589548 N4BP2Q86UW6 1770 aaPredicted RBP25.06■■□□□ 1.6
CXXC1-211ENST00000589548 HSPA6P17066 643 aa25.06■■□□□ 1.6
CXXC1-211ENST00000589548 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
CXXC1-211ENST00000589548 LOC102724428A0A0B4J2F2 783 aa25.05■■□□□ 1.6
CXXC1-211ENST00000589548 SSFA2P28290 1259 aa25.05■■□□□ 1.6
CXXC1-211ENST00000589548 SIK1P57059 783 aa25.05■■□□□ 1.6
CXXC1-211ENST00000589548 ITPK1Q13572 414 aa25.04■■□□□ 1.6
CXXC1-211ENST00000589548 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
CXXC1-211ENST00000589548 PXDNLA1KZ92 1463 aa25.01■■□□□ 1.59
CXXC1-211ENST00000589548 KIF3CO14782 793 aa25■■□□□ 1.59
CXXC1-211ENST00000589548 GNPATO15228 680 aa25■■□□□ 1.59
CXXC1-211ENST00000589548 SPG7Q9UQ90 795 aa25■■□□□ 1.59
CXXC1-211ENST00000589548 COL5A3P25940 1745 aaPredicted RBP25■■□□□ 1.59
CXXC1-211ENST00000589548 BRCA1P38398 1863 aaKnown RBP25■■□□□ 1.59
CXXC1-211ENST00000589548 EYA1Q99502 592 aa24.99■■□□□ 1.59
CXXC1-211ENST00000589548 TMOD3Q9NYL9 352 aa24.99■■□□□ 1.59
CXXC1-211ENST00000589548 ZNF831Q5JPB2 1677 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms