RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 SOX12O15370 315 aa9.51□□□□□ -0.89
BECN1-209ENST00000589492 PRELPP51888 382 aa9.51□□□□□ -0.89
BECN1-209ENST00000589492 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
BECN1-209ENST00000589492 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
BECN1-209ENST00000589492 STAC3Q96MF2 364 aa9.51□□□□□ -0.89
BECN1-209ENST00000589492 TONSLQ96HA7 1378 aa9.5□□□□□ -0.89
BECN1-209ENST00000589492 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
BECN1-209ENST00000589492 ARHGEF25Q86VW2 580 aa9.5□□□□□ -0.89
BECN1-209ENST00000589492 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
BECN1-209ENST00000589492 LY75O60449 1722 aa9.49□□□□□ -0.89
BECN1-209ENST00000589492 HTRA3P83110 453 aa9.49□□□□□ -0.89
BECN1-209ENST00000589492 SLC27A3Q5K4L6 730 aa9.49□□□□□ -0.89
BECN1-209ENST00000589492 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
BECN1-209ENST00000589492 COL23A1Q86Y22 540 aaPredicted RBP9.48□□□□□ -0.89
BECN1-209ENST00000589492 QRICH2Q9H0J4 1663 aa9.48□□□□□ -0.89
BECN1-209ENST00000589492 TOMM70O94826 608 aa9.47□□□□□ -0.89
BECN1-209ENST00000589492 SLC34A2O95436 690 aa9.47□□□□□ -0.89
BECN1-209ENST00000589492 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
BECN1-209ENST00000589492 SRPK2P78362 688 aaKnown RBP9.47□□□□□ -0.89
BECN1-209ENST00000589492 KLRG1Q96E93 195 aa9.47□□□□□ -0.89
BECN1-209ENST00000589492 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
BECN1-209ENST00000589492 CD2APQ9Y5K6 639 aa9.47□□□□□ -0.89
BECN1-209ENST00000589492 NFAT5O94916 1531 aa9.46□□□□□ -0.89
BECN1-209ENST00000589492 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.89
BECN1-209ENST00000589492 JMYQ8N9B5 988 aa9.46□□□□□ -0.9
BECN1-209ENST00000589492 CABP1Q9NZU7 370 aa9.46□□□□□ -0.9
BECN1-209ENST00000589492 KIAA1210Q9ULL0 1709 aa9.45□□□□□ -0.9
BECN1-209ENST00000589492 IL2RBP14784 551 aa9.45□□□□□ -0.9
BECN1-209ENST00000589492 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
BECN1-209ENST00000589492 IGSF1Q8N6C5 1336 aa9.45□□□□□ -0.9
BECN1-209ENST00000589492 KCNH5Q8NCM2 988 aa9.44□□□□□ -0.9
BECN1-209ENST00000589492 SYTL4Q96C24 671 aaPredicted RBP9.44□□□□□ -0.9
BECN1-209ENST00000589492 NMRK2Q9NPI5 230 aa9.44□□□□□ -0.9
BECN1-209ENST00000589492 ERBB3P21860 1342 aa9.44□□□□□ -0.9
BECN1-209ENST00000589492 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
BECN1-209ENST00000589492 NSD2O96028 1365 aa9.43□□□□□ -0.9
BECN1-209ENST00000589492 DDX54Q8TDD1 881 aaKnown RBP9.43□□□□□ -0.9
BECN1-209ENST00000589492 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
BECN1-209ENST00000589492 LTN1O94822 1766 aa9.42□□□□□ -0.9
BECN1-209ENST00000589492 C5P01031 1676 aa9.42□□□□□ -0.9
BECN1-209ENST00000589492 TTC21BQ7Z4L5 1316 aa9.42□□□□□ -0.9
BECN1-209ENST00000589492 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
BECN1-209ENST00000589492 NEUROD1Q13562 356 aa9.42□□□□□ -0.9
BECN1-209ENST00000589492 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
BECN1-209ENST00000589492 ANKRD36BQ8N2N9 1353 aa9.4□□□□□ -0.9
BECN1-209ENST00000589492 RBM46Q8TBY0 533 aaKnown RBP9.4□□□□□ -0.9
BECN1-209ENST00000589492 SIN3AQ96ST3 1273 aa9.4□□□□□ -0.9
BECN1-209ENST00000589492 PCNTO95613 3336 aa9.4□□□□□ -0.9
BECN1-209ENST00000589492 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.91
BECN1-209ENST00000589492 TOGARAM1Q9Y4F4 1720 aa9.39□□□□□ -0.91
BECN1-209ENST00000589492 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
BECN1-209ENST00000589492 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
BECN1-209ENST00000589492 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
BECN1-209ENST00000589492 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
BECN1-209ENST00000589492 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
BECN1-209ENST00000589492 N4BP2Q86UW6 1770 aaPredicted RBP9.38□□□□□ -0.91
BECN1-209ENST00000589492 DSG3P32926 999 aa9.38□□□□□ -0.91
BECN1-209ENST00000589492 SMIM5Q71RC9 77 aa9.38□□□□□ -0.91
BECN1-209ENST00000589492 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
BECN1-209ENST00000589492 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
BECN1-209ENST00000589492 KIAA1551Q9HCM1 1747 aa9.38□□□□□ -0.91
BECN1-209ENST00000589492 USP47Q96K76 1375 aa9.37□□□□□ -0.91
BECN1-209ENST00000589492 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
BECN1-209ENST00000589492 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
BECN1-209ENST00000589492 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 FSTL1Q12841 308 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 FLAD1Q8NFF5 587 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 ZNF692Q9BU19 519 aaPredicted RBP9.36□□□□□ -0.91
BECN1-209ENST00000589492 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
BECN1-209ENST00000589492 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
BECN1-209ENST00000589492 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 RGPD2P0DJD1 1756 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 PHF14O94880 888 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 PKD1L3Q7Z443 1732 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 BCS1LQ9Y276 419 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 KIF13BQ9NQT8 1826 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 KCPQ6ZWJ8 1503 aa9.35□□□□□ -0.91
BECN1-209ENST00000589492 KTN1Q86UP2 1357 aaKnown RBP9.35□□□□□ -0.91
BECN1-209ENST00000589492 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
BECN1-209ENST00000589492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
BECN1-209ENST00000589492 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
BECN1-209ENST00000589492 MEGF6O75095 1541 aa9.33□□□□□ -0.92
BECN1-209ENST00000589492 C9orf131Q5VYM1 1079 aa9.33□□□□□ -0.92
BECN1-209ENST00000589492 NME9Q86XW9 330 aa9.33□□□□□ -0.92
BECN1-209ENST00000589492 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
BECN1-209ENST00000589492 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
BECN1-209ENST00000589492 PALLDQ8WX93 1383 aa9.33□□□□□ -0.92
BECN1-209ENST00000589492 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
BECN1-209ENST00000589492 EVC2Q86UK5 1308 aa9.32□□□□□ -0.92
BECN1-209ENST00000589492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.32□□□□□ -0.92
BECN1-209ENST00000589492 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
BECN1-209ENST00000589492 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
BECN1-209ENST00000589492 AK7Q96M32 723 aa9.32□□□□□ -0.92
BECN1-209ENST00000589492 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
BECN1-209ENST00000589492 PLEKHG2Q9H7P9 1386 aa9.32□□□□□ -0.92
BECN1-209ENST00000589492 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
BECN1-209ENST00000589492 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
BECN1-209ENST00000589492 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms