RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 PTGER2P43116 358 aa23.75■■□□□ 1.39
AP3D1-207ENST00000589369 ATF5Q9Y2D1 282 aaPredicted RBP23.75■■□□□ 1.39
AP3D1-207ENST00000589369 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
AP3D1-207ENST00000589369 ZNF827Q17R98 1081 aa23.74■■□□□ 1.39
AP3D1-207ENST00000589369 INSRP06213 1382 aa23.74■■□□□ 1.39
AP3D1-207ENST00000589369 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
AP3D1-207ENST00000589369 NSD2O96028 1365 aa23.73■■□□□ 1.39
AP3D1-207ENST00000589369 SMG6Q86US8 1419 aaKnown RBP23.73■■□□□ 1.39
AP3D1-207ENST00000589369 FLT4P35916 1363 aa23.72■■□□□ 1.39
AP3D1-207ENST00000589369 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
AP3D1-207ENST00000589369 SYTL4Q96C24 671 aaPredicted RBP23.71■■□□□ 1.39
AP3D1-207ENST00000589369 EMILIN1Q9Y6C2 1016 aa23.7■■□□□ 1.38
AP3D1-207ENST00000589369 SGIP1Q9BQI5 828 aa23.69■■□□□ 1.38
AP3D1-207ENST00000589369 MTFR1LQ9H019 292 aa23.69■■□□□ 1.38
AP3D1-207ENST00000589369 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
AP3D1-207ENST00000589369 SLC27A3Q5K4L6 730 aa23.68■■□□□ 1.38
AP3D1-207ENST00000589369 RAPGEF4Q8WZA2 1011 aa23.68■■□□□ 1.38
AP3D1-207ENST00000589369 AKT1S1Q96B36 256 aa23.68■■□□□ 1.38
AP3D1-207ENST00000589369 KCNQ4P56696 695 aa23.67■■□□□ 1.38
AP3D1-207ENST00000589369 TATP17735 454 aaPredicted RBP23.66■■□□□ 1.38
AP3D1-207ENST00000589369 LY75O60449 1722 aa23.66■■□□□ 1.38
AP3D1-207ENST00000589369 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
AP3D1-207ENST00000589369 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.37
AP3D1-207ENST00000589369 QSER1Q2KHR3 1735 aa23.62■■□□□ 1.37
AP3D1-207ENST00000589369 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
AP3D1-207ENST00000589369 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
AP3D1-207ENST00000589369 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
AP3D1-207ENST00000589369 FHDC1Q9C0D6 1143 aaPredicted RBP23.62■■□□□ 1.37
AP3D1-207ENST00000589369 PCDH11XQ9BZA7 1347 aa23.61■■□□□ 1.37
AP3D1-207ENST00000589369 PCDH11YQ9BZA8 1340 aa23.61■■□□□ 1.37
AP3D1-207ENST00000589369 TUBGCP6Q96RT7 1819 aa23.61■■□□□ 1.37
AP3D1-207ENST00000589369 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
AP3D1-207ENST00000589369 CYP27B1O15528 508 aa23.6■■□□□ 1.37
AP3D1-207ENST00000589369 EIF4G2P78344 907 aaKnown RBP eCLIP23.6■■□□□ 1.37
AP3D1-207ENST00000589369 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
AP3D1-207ENST00000589369 MAP2P11137 1827 aaKnown RBP23.6■■□□□ 1.37
AP3D1-207ENST00000589369 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
AP3D1-207ENST00000589369 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
AP3D1-207ENST00000589369 CCNL1Q9UK58 526 aaPredicted RBP23.59■■□□□ 1.37
AP3D1-207ENST00000589369 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
AP3D1-207ENST00000589369 YY1P25490 414 aa23.58■■□□□ 1.37
AP3D1-207ENST00000589369 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.37
AP3D1-207ENST00000589369 ARXQ96QS3 562 aa23.58■■□□□ 1.37
AP3D1-207ENST00000589369 TOGARAM1Q9Y4F4 1720 aa23.58■■□□□ 1.37
AP3D1-207ENST00000589369 DCAF8L1A6NGE4 600 aa23.57■■□□□ 1.36
AP3D1-207ENST00000589369 TFCP2L1Q9NZI6 479 aa23.57■■□□□ 1.36
AP3D1-207ENST00000589369 EYA1Q99502 592 aa23.56■■□□□ 1.36
AP3D1-207ENST00000589369 SLC16A10Q8TF71 515 aa23.55■■□□□ 1.36
AP3D1-207ENST00000589369 UTRNP46939 3433 aa23.55■■□□□ 1.36
AP3D1-207ENST00000589369 COL24A1Q17RW2 1714 aa23.55■■□□□ 1.36
AP3D1-207ENST00000589369 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
AP3D1-207ENST00000589369 MPRIPQ6WCQ1 1025 aa23.53■■□□□ 1.36
AP3D1-207ENST00000589369 PANK3Q9H999 370 aa23.53■■□□□ 1.36
AP3D1-207ENST00000589369 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
AP3D1-207ENST00000589369 ITGB4P16144 1822 aa23.52■■□□□ 1.36
AP3D1-207ENST00000589369 PALLDQ8WX93 1383 aa23.52■■□□□ 1.36
AP3D1-207ENST00000589369 EIF4A2Q14240 407 aaKnown RBP23.51■■□□□ 1.35
AP3D1-207ENST00000589369 NKX1-1Q15270 411 aaPredicted RBP23.5■■□□□ 1.35
AP3D1-207ENST00000589369 C5P01031 1676 aa23.5■■□□□ 1.35
AP3D1-207ENST00000589369 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
AP3D1-207ENST00000589369 SPG7Q9UQ90 795 aa23.49■■□□□ 1.35
AP3D1-207ENST00000589369 PIGBQ92521 554 aa23.48■■□□□ 1.35
AP3D1-207ENST00000589369 TAF1LQ8IZX4 1826 aa23.47■■□□□ 1.35
AP3D1-207ENST00000589369 POLD1P28340 1107 aa23.47■■□□□ 1.35
AP3D1-207ENST00000589369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.47■■□□□ 1.35
AP3D1-207ENST00000589369 MSH5O43196 834 aa23.44■■□□□ 1.34
AP3D1-207ENST00000589369 PHKG2P15735 406 aa23.44■■□□□ 1.34
AP3D1-207ENST00000589369 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
AP3D1-207ENST00000589369 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
AP3D1-207ENST00000589369 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
AP3D1-207ENST00000589369 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
AP3D1-207ENST00000589369 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
AP3D1-207ENST00000589369 MSL1Q68DK7 614 aa23.41■■□□□ 1.34
AP3D1-207ENST00000589369 AMIGO3Q86WK7 504 aa23.41■■□□□ 1.34
AP3D1-207ENST00000589369 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
AP3D1-207ENST00000589369 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
AP3D1-207ENST00000589369 TMOD3Q9NYL9 352 aa23.39■■□□□ 1.33
AP3D1-207ENST00000589369 ASAP1Q9ULH1 1129 aa23.39■■□□□ 1.33
AP3D1-207ENST00000589369 PLEKHG2Q9H7P9 1386 aa23.39■■□□□ 1.33
AP3D1-207ENST00000589369 SMIM5Q71RC9 77 aa23.38■■□□□ 1.33
AP3D1-207ENST00000589369 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
AP3D1-207ENST00000589369 LOC102724428A0A0B4J2F2 783 aa23.37■■□□□ 1.33
AP3D1-207ENST00000589369 SIK1P57059 783 aa23.37■■□□□ 1.33
AP3D1-207ENST00000589369 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
AP3D1-207ENST00000589369 HMGB2P26583 209 aaKnown RBP23.36■■□□□ 1.33
AP3D1-207ENST00000589369 LINC00116Q8NCU8 138 aa23.36■■□□□ 1.33
AP3D1-207ENST00000589369 FLAD1Q8NFF5 587 aa23.36■■□□□ 1.33
AP3D1-207ENST00000589369 AK7Q96M32 723 aa23.36■■□□□ 1.33
AP3D1-207ENST00000589369 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 CHD4Q14839 1912 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 ITPK1Q13572 414 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 GPR162Q16538 588 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 AEBP1Q8IUX7 1158 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 ATG3Q9NT62 314 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 KNSTRNQ9Y448 316 aa23.35■■□□□ 1.33
AP3D1-207ENST00000589369 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
AP3D1-207ENST00000589369 PHF14O94880 888 aa23.33■■□□□ 1.33
AP3D1-207ENST00000589369 ZNF784Q8NCA9 323 aaPredicted RBP23.33■■□□□ 1.33
AP3D1-207ENST00000589369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.32■■□□□ 1.32
AP3D1-207ENST00000589369 PLEKHO1Q53GL0 409 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms