RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 EVA1CP58658 441 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■□□□□ 10
RANBP3-216ENST00000589353 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
RANBP3-216ENST00000589353 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
RANBP3-216ENST00000589353 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
RANBP3-216ENST00000589353 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
RANBP3-216ENST00000589353 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
RANBP3-216ENST00000589353 ZNF530Q6P9A1 599 aaPredicted RBP12.9□□□□□ -0.34
RANBP3-216ENST00000589353 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
RANBP3-216ENST00000589353 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
RANBP3-216ENST00000589353 MS4A1P11836 297 aa12.89□□□□□ -0.35
RANBP3-216ENST00000589353 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
RANBP3-216ENST00000589353 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
RANBP3-216ENST00000589353 MCM10Q7L590 875 aa12.89□□□□□ -0.35
RANBP3-216ENST00000589353 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
RANBP3-216ENST00000589353 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
RANBP3-216ENST00000589353 CHL1O00533 1208 aa12.88□□□□□ -0.35
RANBP3-216ENST00000589353 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
RANBP3-216ENST00000589353 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-216ENST00000589353 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
RANBP3-216ENST00000589353 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
RANBP3-216ENST00000589353 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
RANBP3-216ENST00000589353 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
RANBP3-216ENST00000589353 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
RANBP3-216ENST00000589353 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
RANBP3-216ENST00000589353 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
RANBP3-216ENST00000589353 CARD10Q9BWT7 1032 aa12.87□□□□□ -0.35
RANBP3-216ENST00000589353 COL16A1Q07092 1604 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-216ENST00000589353 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
RANBP3-216ENST00000589353 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
RANBP3-216ENST00000589353 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
RANBP3-216ENST00000589353 TSPYL4Q9UJ04 414 aa12.86□□□□□ -0.35
RANBP3-216ENST00000589353 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
RANBP3-216ENST00000589353 CRB1P82279 1406 aa12.86□□□□□ -0.35
RANBP3-216ENST00000589353 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
RANBP3-216ENST00000589353 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
RANBP3-216ENST00000589353 TEFQ10587 303 aa12.85□□□□□ -0.35
RANBP3-216ENST00000589353 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
RANBP3-216ENST00000589353 STRN4Q9NRL3 753 aa12.85□□□□□ -0.35
RANBP3-216ENST00000589353 BCAR3O75815 825 aa12.84□□□□□ -0.35
RANBP3-216ENST00000589353 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-216ENST00000589353 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
RANBP3-216ENST00000589353 SMC4Q9NTJ3 1288 aa12.84□□□□□ -0.35
RANBP3-216ENST00000589353 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
RANBP3-216ENST00000589353 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
RANBP3-216ENST00000589353 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 JCADQ9P266 1359 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 PLIN1O60240 522 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 IL2RBP14784 551 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
RANBP3-216ENST00000589353 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
RANBP3-216ENST00000589353 VAMP4O75379 141 aa12.82□□□□□ -0.36
RANBP3-216ENST00000589353 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-216ENST00000589353 AAMPQ13685 434 aa12.82□□□□□ -0.36
RANBP3-216ENST00000589353 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-216ENST00000589353 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
RANBP3-216ENST00000589353 LRRC37A3O60309 1634 aa12.81□□□□□ -0.36
RANBP3-216ENST00000589353 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
RANBP3-216ENST00000589353 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
RANBP3-216ENST00000589353 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
RANBP3-216ENST00000589353 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
RANBP3-216ENST00000589353 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-216ENST00000589353 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-216ENST00000589353 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-216ENST00000589353 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
RANBP3-216ENST00000589353 DCAF5Q96JK2 942 aa12.8□□□□□ -0.36
RANBP3-216ENST00000589353 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
RANBP3-216ENST00000589353 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
RANBP3-216ENST00000589353 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
RANBP3-216ENST00000589353 MEGF6O75095 1541 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 ADAMTS2O95450 1211 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 PHKG2P15735 406 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
RANBP3-216ENST00000589353 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 EXOC6Q8TAG9 804 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
RANBP3-216ENST00000589353 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
RANBP3-216ENST00000589353 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
RANBP3-216ENST00000589353 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-216ENST00000589353 HOXB7P09629 217 aa12.78□□□□□ -0.36
RANBP3-216ENST00000589353 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
RANBP3-216ENST00000589353 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
RANBP3-216ENST00000589353 BCL2L13Q9BXK5 485 aa12.78□□□□□ -0.36
RANBP3-216ENST00000589353 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
RANBP3-216ENST00000589353 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
RANBP3-216ENST00000589353 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
RANBP3-216ENST00000589353 DZIP1LQ8IYY4 767 aaKnown RBP12.77□□□□□ -0.37
RANBP3-216ENST00000589353 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
RANBP3-216ENST00000589353 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
RANBP3-216ENST00000589353 MIS18AQ9NYP9 233 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms