RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 COL16A1Q07092 1604 aaPredicted RBP8.42□□□□□ -1.06
LINC01539-202ENST00000589293 IQGAP3Q86VI3 1631 aa8.42□□□□□ -1.06
LINC01539-202ENST00000589293 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.42□□□□□ -1.06
LINC01539-202ENST00000589293 E9PCH4 1651 aa8.41□□□□□ -1.06
LINC01539-202ENST00000589293 AHDC1Q5TGY3 1603 aaPredicted RBP8.41□□□□□ -1.06
LINC01539-202ENST00000589293 MS4A1P11836 297 aa8.41□□□□□ -1.06
LINC01539-202ENST00000589293 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
LINC01539-202ENST00000589293 RBM46Q8TBY0 533 aaKnown RBP8.41□□□□□ -1.06
LINC01539-202ENST00000589293 C8orf37Q96NL8 207 aa8.41□□□□□ -1.06
LINC01539-202ENST00000589293 AFF2P51816 1311 aa8.4□□□□□ -1.06
LINC01539-202ENST00000589293 ANKRD13DQ6ZTN6 518 aa8.4□□□□□ -1.06
LINC01539-202ENST00000589293 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
LINC01539-202ENST00000589293 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
LINC01539-202ENST00000589293 SETD1AO15047 1707 aaKnown RBP8.4□□□□□ -1.07
LINC01539-202ENST00000589293 SHPRHQ149N8 1683 aa8.4□□□□□ -1.07
LINC01539-202ENST00000589293 LRP6O75581 1613 aa8.39□□□□□ -1.07
LINC01539-202ENST00000589293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 DNAJB2P25686 324 aa8.38□□□□□ -1.07
LINC01539-202ENST00000589293 RBM6P78332 1123 aaKnown RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 TTLL12Q14166 644 aaPredicted RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
LINC01539-202ENST00000589293 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
LINC01539-202ENST00000589293 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
LINC01539-202ENST00000589293 ASXL1Q8IXJ9 1541 aa8.38□□□□□ -1.07
LINC01539-202ENST00000589293 PTPRUQ92729 1446 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 PLEKHG3A1L390 1219 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 FAM98CQ17RN3 349 aaKnown RBP8.37□□□□□ -1.07
LINC01539-202ENST00000589293 CDK12Q9NYV4 1490 aaPredicted RBP8.37□□□□□ -1.07
LINC01539-202ENST00000589293 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 MST1RQ04912 1400 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 ADGRL3Q9HAR2 1447 aa8.37□□□□□ -1.07
LINC01539-202ENST00000589293 SETBP1Q9Y6X0 1596 aa8.36□□□□□ -1.07
LINC01539-202ENST00000589293 CLCN1P35523 988 aa8.36□□□□□ -1.07
LINC01539-202ENST00000589293 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
LINC01539-202ENST00000589293 METP08581 1390 aa8.35□□□□□ -1.07
LINC01539-202ENST00000589293 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
LINC01539-202ENST00000589293 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
LINC01539-202ENST00000589293 USP21Q9UK80 565 aa8.35□□□□□ -1.07
LINC01539-202ENST00000589293 XRN1Q8IZH2 1706 aaKnown RBP8.34□□□□□ -1.07
LINC01539-202ENST00000589293 RPGRIP1LQ68CZ1 1315 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
LINC01539-202ENST00000589293 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 LAPTM4BQ86VI4 370 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 DDX17Q92841 729 aaKnown RBP8.34□□□□□ -1.07
LINC01539-202ENST00000589293 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 TRPC5Q9UL62 973 aaPredicted RBP8.34□□□□□ -1.07
LINC01539-202ENST00000589293 ATAD2Q6PL18 1390 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 PNPLA6Q8IY17 1366 aa8.34□□□□□ -1.07
LINC01539-202ENST00000589293 KIF1BO60333 1816 aa8.33□□□□□ -1.08
LINC01539-202ENST00000589293 SLC10A3P09131 477 aa8.33□□□□□ -1.08
LINC01539-202ENST00000589293 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
LINC01539-202ENST00000589293 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
LINC01539-202ENST00000589293 LRPPRCP42704 1394 aaKnown RBP8.33□□□□□ -1.08
LINC01539-202ENST00000589293 NHSL1Q5SYE7 1610 aa8.32□□□□□ -1.08
LINC01539-202ENST00000589293 C1orf167Q5SNV9 1468 aa8.32□□□□□ -1.08
LINC01539-202ENST00000589293 NPHP3Q7Z494 1330 aa8.32□□□□□ -1.08
LINC01539-202ENST00000589293 PTCH1Q13635 1447 aa8.32□□□□□ -1.08
LINC01539-202ENST00000589293 NRXN3Q9Y4C0 1643 aa8.32□□□□□ -1.08
LINC01539-202ENST00000589293 HFM1A2PYH4 1435 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 NEXMIFQ5QGS0 1516 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 CD46P15529 392 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 IL27Q8NEV9 243 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 ORAI2Q96SN7 254 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 CLTCL1P53675 1640 aa8.31□□□□□ -1.08
LINC01539-202ENST00000589293 RGS12O14924 1447 aa8.3□□□□□ -1.08
LINC01539-202ENST00000589293 STK26Q9P289 416 aa8.3□□□□□ -1.08
LINC01539-202ENST00000589293 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
LINC01539-202ENST00000589293 NALCNQ8IZF0 1738 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
LINC01539-202ENST00000589293 RGL3Q3MIN7 710 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 ROBO2Q9HCK4 1378 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 CCDC144AA2RUR9 1427 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 NAIPQ13075 1403 aa8.29□□□□□ -1.08
LINC01539-202ENST00000589293 FOXO3O43524 673 aa8.28□□□□□ -1.08
LINC01539-202ENST00000589293 BCAMP50895 628 aa8.28□□□□□ -1.08
LINC01539-202ENST00000589293 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
LINC01539-202ENST00000589293 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
LINC01539-202ENST00000589293 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
LINC01539-202ENST00000589293 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
LINC01539-202ENST00000589293 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.09
LINC01539-202ENST00000589293 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
LINC01539-202ENST00000589293 A0A0G2JS52 829 aa8.26□□□□□ -1.09
LINC01539-202ENST00000589293 MYT1Q01538 1121 aa8.26□□□□□ -1.09
LINC01539-202ENST00000589293 PSME1Q06323 249 aa8.26□□□□□ -1.09
LINC01539-202ENST00000589293 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
LINC01539-202ENST00000589293 ACIN1Q9UKV3 1341 aaKnown RBP8.26□□□□□ -1.09
LINC01539-202ENST00000589293 SOWAHBA6NEL2 793 aa8.25□□□□□ -1.09
LINC01539-202ENST00000589293 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
LINC01539-202ENST00000589293 CDC42BPGQ6DT37 1551 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 ATRNO75882 1429 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 PRAG1Q86YV5 1406 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 GCGRP47871 477 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 WAPLQ7Z5K2 1190 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 UNC5CLQ8IV45 518 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms