RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 BCL9LQ86UU0 1499 aa32.47■■■□□ 2.79
RFX1-205ENST00000589239 TATP17735 454 aaPredicted RBP32.47■■■□□ 2.79
RFX1-205ENST00000589239 UNC5CLQ8IV45 518 aa32.47■■■□□ 2.79
RFX1-205ENST00000589239 PLEKHO1Q53GL0 409 aaPredicted RBP32.45■■■□□ 2.78
RFX1-205ENST00000589239 CDCA7LQ96GN5 454 aa32.45■■■□□ 2.78
RFX1-205ENST00000589239 AMOTQ4VCS5 1084 aa32.44■■■□□ 2.78
RFX1-205ENST00000589239 DLG5Q8TDM6 1919 aa32.44■■■□□ 2.78
RFX1-205ENST00000589239 USP21Q9UK80 565 aa32.42■■■□□ 2.78
RFX1-205ENST00000589239 IL2RBP14784 551 aa32.42■■■□□ 2.78
RFX1-205ENST00000589239 GOLGA2Q08379 1002 aa32.41■■■□□ 2.78
RFX1-205ENST00000589239 PDE3BQ13370 1112 aa32.41■■■□□ 2.78
RFX1-205ENST00000589239 DCTN1Q14203 1278 aa32.41■■■□□ 2.78
RFX1-205ENST00000589239 SPATA31A1Q5TZJ5 1347 aa32.4■■■□□ 2.78
RFX1-205ENST00000589239 THUMPD2Q9BTF0 503 aaKnown RBP32.4■■■□□ 2.78
RFX1-205ENST00000589239 CCDC9Q9Y3X0 531 aaKnown RBP32.4■■■□□ 2.78
RFX1-205ENST00000589239 LMOD3Q0VAK6 560 aa32.39■■■□□ 2.78
RFX1-205ENST00000589239 ZNF530Q6P9A1 599 aaPredicted RBP32.39■■■□□ 2.78
RFX1-205ENST00000589239 SPINK5Q9NQ38 1064 aaPredicted RBP32.39■■■□□ 2.78
RFX1-205ENST00000589239 OVOS2A0A0G2JMS6 1433 aa32.39■■■□□ 2.78
RFX1-205ENST00000589239 AFF2P51816 1311 aa32.38■■■□□ 2.77
RFX1-205ENST00000589239 SPATA31A5Q5VU36 1347 aa32.38■■■□□ 2.77
RFX1-205ENST00000589239 SPATA31A7Q8IWB4 1347 aa32.38■■■□□ 2.77
RFX1-205ENST00000589239 WDR63Q8IWG1 891 aa32.38■■■□□ 2.77
RFX1-205ENST00000589239 MCM10Q7L590 875 aa32.38■■■□□ 2.77
RFX1-205ENST00000589239 GNAT3A8MTJ3 354 aa32.37■■■□□ 2.77
RFX1-205ENST00000589239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.36■■■□□ 2.77
RFX1-205ENST00000589239 SPG7Q9UQ90 795 aa32.36■■■□□ 2.77
RFX1-205ENST00000589239 MAP3K5Q99683 1374 aa32.36■■■□□ 2.77
RFX1-205ENST00000589239 PLEKHG2Q9H7P9 1386 aa32.36■■■□□ 2.77
RFX1-205ENST00000589239 VPS72Q15906 364 aa32.36■■■□□ 2.77
RFX1-205ENST00000589239 RTF1Q92541 710 aaKnown RBP32.35■■■□□ 2.77
RFX1-205ENST00000589239 PARP4Q9UKK3 1724 aaKnown RBP32.35■■■□□ 2.77
RFX1-205ENST00000589239 AKAP4Q5JQC9 854 aa32.33■■■□□ 2.77
RFX1-205ENST00000589239 DISP2A7MBM2 1401 aa32.33■■■□□ 2.77
RFX1-205ENST00000589239 SLFN5Q08AF3 891 aa32.33■■■□□ 2.77
RFX1-205ENST00000589239 C1orf141Q5JVX7 400 aa32.33■■■□□ 2.77
RFX1-205ENST00000589239 THRAP3Q9Y2W1 955 aaKnown RBP32.32■■■□□ 2.76
RFX1-205ENST00000589239 PKD1L3Q7Z443 1732 aa32.32■■■□□ 2.76
RFX1-205ENST00000589239 ZCRB1Q8TBF4 217 aaKnown RBP32.32■■■□□ 2.76
RFX1-205ENST00000589239 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.31■■■□□ 2.76
RFX1-205ENST00000589239 E9PSI1 815 aa32.3■■■□□ 2.76
RFX1-205ENST00000589239 HTATSF1O43719 755 aaKnown RBP32.3■■■□□ 2.76
RFX1-205ENST00000589239 CYP27B1O15528 508 aa32.3■■■□□ 2.76
RFX1-205ENST00000589239 IL17REQ8NFR9 667 aa32.29■■■□□ 2.76
RFX1-205ENST00000589239 PHKG2P15735 406 aa32.29■■■□□ 2.76
RFX1-205ENST00000589239 MPRIPQ6WCQ1 1025 aa32.29■■■□□ 2.76
RFX1-205ENST00000589239 DUSP27Q5VZP5 1158 aa32.27■■■□□ 2.76
RFX1-205ENST00000589239 IFNL2Q8IZJ0 200 aa32.27■■■□□ 2.76
RFX1-205ENST00000589239 TRMT2AQ8IZ69 625 aaKnown RBP32.27■■■□□ 2.76
RFX1-205ENST00000589239 IL16Q14005 1332 aa32.26■■■□□ 2.76
RFX1-205ENST00000589239 CALD1Q05682 793 aaKnown RBP32.26■■■□□ 2.76
RFX1-205ENST00000589239 BARGINQ6ZT62 677 aa32.26■■■□□ 2.76
RFX1-205ENST00000589239 LGR6Q9HBX8 967 aa32.26■■■□□ 2.76
RFX1-205ENST00000589239 SUPT16HQ9Y5B9 1047 aaKnown RBP32.26■■■□□ 2.76
RFX1-205ENST00000589239 PCDH11XQ9BZA7 1347 aa32.26■■■□□ 2.75
RFX1-205ENST00000589239 PCDH11YQ9BZA8 1340 aa32.26■■■□□ 2.75
RFX1-205ENST00000589239 WNK3Q9BYP7 1800 aa32.25■■■□□ 2.75
RFX1-205ENST00000589239 LAS1LQ9Y4W2 734 aaKnown RBP32.25■■■□□ 2.75
RFX1-205ENST00000589239 FAM98CQ17RN3 349 aaKnown RBP32.24■■■□□ 2.75
RFX1-205ENST00000589239 DDX54Q8TDD1 881 aaKnown RBP32.24■■■□□ 2.75
RFX1-205ENST00000589239 CDCA7Q9BWT1 371 aaPredicted RBP32.24■■■□□ 2.75
RFX1-205ENST00000589239 TRPC5Q9UL62 973 aaPredicted RBP32.23■■■□□ 2.75
RFX1-205ENST00000589239 TSR2Q969E8 191 aaKnown RBP32.23■■■□□ 2.75
RFX1-205ENST00000589239 CEMIPQ8WUJ3 1361 aa32.22■■■□□ 2.75
RFX1-205ENST00000589239 SHANK3Q9BYB0 1731 aa32.22■■■□□ 2.75
RFX1-205ENST00000589239 ATRNO75882 1429 aa32.22■■■□□ 2.75
RFX1-205ENST00000589239 GJD4Q96KN9 370 aaPredicted RBP32.21■■■□□ 2.75
RFX1-205ENST00000589239 MYH16Q9H6N6 1097 aa32.21■■■□□ 2.75
RFX1-205ENST00000589239 IFT57Q9NWB7 429 aa32.21■■■□□ 2.75
RFX1-205ENST00000589239 EXOC5O00471 708 aa32.2■■■□□ 2.75
RFX1-205ENST00000589239 RNMTO43148 476 aaKnown RBP32.2■■■□□ 2.75
RFX1-205ENST00000589239 CFAP44Q96MT7 982 aa32.2■■■□□ 2.74
RFX1-205ENST00000589239 FANCIQ9NVI1 1328 aa32.19■■■□□ 2.74
RFX1-205ENST00000589239 ZNF853P0CG23 659 aa32.19■■■□□ 2.74
RFX1-205ENST00000589239 GNAI1P63096 354 aa32.19■■■□□ 2.74
RFX1-205ENST00000589239 QTRT2Q9H974 415 aaKnown RBP32.19■■■□□ 2.74
RFX1-205ENST00000589239 KDM6AO15550 1401 aaPredicted RBP32.19■■■□□ 2.74
RFX1-205ENST00000589239 LRRC37A3O60309 1634 aa32.18■■■□□ 2.74
RFX1-205ENST00000589239 DDB1Q16531 1140 aa32.18■■■□□ 2.74
RFX1-205ENST00000589239 GLI3P10071 1580 aa32.17■■■□□ 2.74
RFX1-205ENST00000589239 TNS2Q63HR2 1409 aa32.17■■■□□ 2.74
RFX1-205ENST00000589239 DCAF5Q96JK2 942 aa32.17■■■□□ 2.74
RFX1-205ENST00000589239 HSP90AB1P08238 724 aaKnown RBP32.16■■■□□ 2.74
RFX1-205ENST00000589239 MBIPQ9NS73 344 aa32.16■■■□□ 2.74
RFX1-205ENST00000589239 MIS18AQ9NYP9 233 aa32.15■■■□□ 2.74
RFX1-205ENST00000589239 TEFQ10587 303 aa32.14■■■□□ 2.74
RFX1-205ENST00000589239 ADAMTS7Q9UKP4 1686 aa32.14■■■□□ 2.74
RFX1-205ENST00000589239 A0A0G2JS52 829 aa32.13■■■□□ 2.73
RFX1-205ENST00000589239 CHL1O00533 1208 aa32.13■■■□□ 2.73
RFX1-205ENST00000589239 NKX1-1Q15270 411 aaPredicted RBP32.13■■■□□ 2.73
RFX1-205ENST00000589239 VIRMAQ69YN4 1812 aaKnown RBP32.13■■■□□ 2.73
RFX1-205ENST00000589239 TAF7Q15545 349 aaPredicted RBP32.12■■■□□ 2.73
RFX1-205ENST00000589239 ZNF772Q68DY9 489 aaPredicted RBP32.12■■■□□ 2.73
RFX1-205ENST00000589239 SCN11AQ9UI33 1791 aa32.1■■■□□ 2.73
RFX1-205ENST00000589239 TSPYL4Q9UJ04 414 aa32.1■■■□□ 2.73
RFX1-205ENST00000589239 EXOSC9Q06265 439 aaKnown RBP32.09■■■□□ 2.73
RFX1-205ENST00000589239 SLC52A2Q9HAB3 445 aa32.08■■■□□ 2.73
RFX1-205ENST00000589239 NFATC2IPQ8NCF5 419 aa32.07■■■□□ 2.72
RFX1-205ENST00000589239 THSD7AQ9UPZ6 1657 aa32.07■■■□□ 2.72
RFX1-205ENST00000589239 MARCH10Q8NA82 808 aaPredicted RBP32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms