RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 DDX54Q8TDD1 881 aaKnown RBP20.88■□□□□ 0.93
ERCC1-209ENST00000589214 PLSCR1O15162 318 aa20.86■□□□□ 0.93
ERCC1-209ENST00000589214 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
ERCC1-209ENST00000589214 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
ERCC1-209ENST00000589214 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
ERCC1-209ENST00000589214 NBPF14Q5TI25 921 aa20.84■□□□□ 0.93
ERCC1-209ENST00000589214 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
ERCC1-209ENST00000589214 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
ERCC1-209ENST00000589214 TATP17735 454 aaPredicted RBP20.83■□□□□ 0.93
ERCC1-209ENST00000589214 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
ERCC1-209ENST00000589214 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.92
ERCC1-209ENST00000589214 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
ERCC1-209ENST00000589214 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-209ENST00000589214 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
ERCC1-209ENST00000589214 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
ERCC1-209ENST00000589214 PROM2Q8N271 834 aa20.79■□□□□ 0.92
ERCC1-209ENST00000589214 SYTL4Q96C24 671 aaPredicted RBP20.79■□□□□ 0.92
ERCC1-209ENST00000589214 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
ERCC1-209ENST00000589214 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
ERCC1-209ENST00000589214 EYA1Q99502 592 aa20.78■□□□□ 0.92
ERCC1-209ENST00000589214 EIF4A2Q14240 407 aaKnown RBP20.77■□□□□ 0.92
ERCC1-209ENST00000589214 AMER1Q5JTC6 1135 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-209ENST00000589214 PAPPAQ13219 1627 aa20.77■□□□□ 0.92
ERCC1-209ENST00000589214 TOGARAM1Q9Y4F4 1720 aa20.76■□□□□ 0.91
ERCC1-209ENST00000589214 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
ERCC1-209ENST00000589214 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-209ENST00000589214 CASZ1Q86V15 1759 aa20.74■□□□□ 0.91
ERCC1-209ENST00000589214 PER1O15534 1290 aaPredicted RBP20.74■□□□□ 0.91
ERCC1-209ENST00000589214 CYP27B1O15528 508 aa20.72■□□□□ 0.91
ERCC1-209ENST00000589214 STK32BQ9NY57 414 aa20.72■□□□□ 0.91
ERCC1-209ENST00000589214 LY75O60449 1722 aa20.72■□□□□ 0.91
ERCC1-209ENST00000589214 IGSF1Q8N6C5 1336 aa20.72■□□□□ 0.91
ERCC1-209ENST00000589214 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
ERCC1-209ENST00000589214 SRCAPQ6ZRS2 3230 aa20.7■□□□□ 0.9
ERCC1-209ENST00000589214 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
ERCC1-209ENST00000589214 ITGB4P16144 1822 aa20.69■□□□□ 0.9
ERCC1-209ENST00000589214 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
ERCC1-209ENST00000589214 LRRC4BQ9NT99 713 aa20.68■□□□□ 0.9
ERCC1-209ENST00000589214 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-209ENST00000589214 PDGFDQ9GZP0 370 aaPredicted RBP20.66■□□□□ 0.9
ERCC1-209ENST00000589214 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
ERCC1-209ENST00000589214 KCNQ4P56696 695 aa20.65■□□□□ 0.9
ERCC1-209ENST00000589214 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
ERCC1-209ENST00000589214 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
ERCC1-209ENST00000589214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.65■□□□□ 0.9
ERCC1-209ENST00000589214 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
ERCC1-209ENST00000589214 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.89
ERCC1-209ENST00000589214 AEBP1Q8IUX7 1158 aa20.64■□□□□ 0.89
ERCC1-209ENST00000589214 SPON1Q9HCB6 807 aa20.64■□□□□ 0.89
ERCC1-209ENST00000589214 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
ERCC1-209ENST00000589214 PHKG2P15735 406 aa20.63■□□□□ 0.89
ERCC1-209ENST00000589214 MTHFSP49914 203 aa20.63■□□□□ 0.89
ERCC1-209ENST00000589214 PALLDQ8WX93 1383 aa20.62■□□□□ 0.89
ERCC1-209ENST00000589214 QSER1Q2KHR3 1735 aa20.62■□□□□ 0.89
ERCC1-209ENST00000589214 C5P01031 1676 aa20.62■□□□□ 0.89
ERCC1-209ENST00000589214 ZBTB7AO95365 584 aa20.62■□□□□ 0.89
ERCC1-209ENST00000589214 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
ERCC1-209ENST00000589214 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
ERCC1-209ENST00000589214 IL13P35225 146 aa20.61■□□□□ 0.89
ERCC1-209ENST00000589214 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
ERCC1-209ENST00000589214 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
ERCC1-209ENST00000589214 KDRP35968 1356 aa20.59■□□□□ 0.89
ERCC1-209ENST00000589214 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
ERCC1-209ENST00000589214 PPP1R1BQ9UD71 204 aaPredicted RBP20.59■□□□□ 0.89
ERCC1-209ENST00000589214 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-209ENST00000589214 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-209ENST00000589214 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
ERCC1-209ENST00000589214 TAF1LQ8IZX4 1826 aa20.57■□□□□ 0.88
ERCC1-209ENST00000589214 PIGBQ92521 554 aa20.57■□□□□ 0.88
ERCC1-209ENST00000589214 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
ERCC1-209ENST00000589214 KDM6AO15550 1401 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-209ENST00000589214 ATF5Q9Y2D1 282 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-209ENST00000589214 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
ERCC1-209ENST00000589214 AMOTQ4VCS5 1084 aa20.55■□□□□ 0.88
ERCC1-209ENST00000589214 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
ERCC1-209ENST00000589214 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
ERCC1-209ENST00000589214 HMOX1P09601 288 aa20.54■□□□□ 0.88
ERCC1-209ENST00000589214 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
ERCC1-209ENST00000589214 MTFR1LQ9H019 292 aa20.54■□□□□ 0.88
ERCC1-209ENST00000589214 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
ERCC1-209ENST00000589214 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
ERCC1-209ENST00000589214 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
ERCC1-209ENST00000589214 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
ERCC1-209ENST00000589214 PTGER2P43116 358 aa20.52■□□□□ 0.88
ERCC1-209ENST00000589214 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
ERCC1-209ENST00000589214 SCN11AQ9UI33 1791 aa20.5■□□□□ 0.87
ERCC1-209ENST00000589214 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
ERCC1-209ENST00000589214 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
ERCC1-209ENST00000589214 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
ERCC1-209ENST00000589214 ERVV-2B6SEH9 535 aa20.48■□□□□ 0.87
ERCC1-209ENST00000589214 SIK1P57059 783 aa20.48■□□□□ 0.87
ERCC1-209ENST00000589214 CABP4P57796 275 aa20.47■□□□□ 0.87
ERCC1-209ENST00000589214 SGIP1Q9BQI5 828 aa20.47■□□□□ 0.87
ERCC1-209ENST00000589214 ATG3Q9NT62 314 aa20.47■□□□□ 0.87
ERCC1-209ENST00000589214 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
ERCC1-209ENST00000589214 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
ERCC1-209ENST00000589214 UBR3Q6ZT12 1888 aa20.46■□□□□ 0.87
ERCC1-209ENST00000589214 MSH5O43196 834 aa20.46■□□□□ 0.87
ERCC1-209ENST00000589214 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
ERCC1-209ENST00000589214 AK7Q96M32 723 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms