RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 NBPF4Q96M43 638 aa15.58■□□□□ 0.08
MRPL54-202ENST00000589174 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
MRPL54-202ENST00000589174 CHD4Q14839 1912 aa15.57■□□□□ 0.08
MRPL54-202ENST00000589174 USHBP1Q8N6Y0 703 aa15.57■□□□□ 0.08
MRPL54-202ENST00000589174 USP47Q96K76 1375 aa15.57■□□□□ 0.08
MRPL54-202ENST00000589174 PRIM1P49642 420 aaKnown RBP15.56■□□□□ 0.08
MRPL54-202ENST00000589174 COG3Q96JB2 828 aa15.56■□□□□ 0.08
MRPL54-202ENST00000589174 CARD14Q9BXL6 1004 aa15.56■□□□□ 0.08
MRPL54-202ENST00000589174 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
MRPL54-202ENST00000589174 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
MRPL54-202ENST00000589174 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
MRPL54-202ENST00000589174 ITGB4P16144 1822 aa15.55■□□□□ 0.08
MRPL54-202ENST00000589174 RTL1A6NKG5 1358 aa15.54■□□□□ 0.08
MRPL54-202ENST00000589174 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
MRPL54-202ENST00000589174 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
MRPL54-202ENST00000589174 AMPHP49418 695 aa15.53■□□□□ 0.08
MRPL54-202ENST00000589174 HSP90AB2PQ58FF8 381 aa15.53■□□□□ 0.08
MRPL54-202ENST00000589174 C5P01031 1676 aa15.53■□□□□ 0.08
MRPL54-202ENST00000589174 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
MRPL54-202ENST00000589174 ARXQ96QS3 562 aa15.52■□□□□ 0.08
MRPL54-202ENST00000589174 NCAPD2Q15021 1401 aa15.51■□□□□ 0.07
MRPL54-202ENST00000589174 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
MRPL54-202ENST00000589174 GOLGB1Q14789 3259 aaKnown RBP15.5■□□□□ 0.07
MRPL54-202ENST00000589174 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
MRPL54-202ENST00000589174 ZNF784Q8NCA9 323 aaPredicted RBP15.5■□□□□ 0.07
MRPL54-202ENST00000589174 INSRP06213 1382 aa15.49■□□□□ 0.07
MRPL54-202ENST00000589174 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
MRPL54-202ENST00000589174 SYTL4Q96C24 671 aaPredicted RBP15.49■□□□□ 0.07
MRPL54-202ENST00000589174 EMILIN1Q9Y6C2 1016 aa15.49■□□□□ 0.07
MRPL54-202ENST00000589174 CYP27B1O15528 508 aa15.48■□□□□ 0.07
MRPL54-202ENST00000589174 TMF1P82094 1093 aa15.48■□□□□ 0.07
MRPL54-202ENST00000589174 NLGN2Q8NFZ4 835 aa15.48■□□□□ 0.07
MRPL54-202ENST00000589174 NSD3Q9BZ95 1437 aa15.48■□□□□ 0.07
MRPL54-202ENST00000589174 UBR3Q6ZT12 1888 aa15.47■□□□□ 0.07
MRPL54-202ENST00000589174 COL23A1Q86Y22 540 aaPredicted RBP15.47■□□□□ 0.07
MRPL54-202ENST00000589174 FLT4P35916 1363 aa15.47■□□□□ 0.07
MRPL54-202ENST00000589174 SMIM5Q71RC9 77 aa15.46■□□□□ 0.07
MRPL54-202ENST00000589174 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
MRPL54-202ENST00000589174 CCNL1Q9UK58 526 aaPredicted RBP15.45■□□□□ 0.06
MRPL54-202ENST00000589174 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
MRPL54-202ENST00000589174 SLC16A10Q8TF71 515 aa15.44■□□□□ 0.06
MRPL54-202ENST00000589174 TFCP2L1Q9NZI6 479 aa15.44■□□□□ 0.06
MRPL54-202ENST00000589174 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
MRPL54-202ENST00000589174 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
MRPL54-202ENST00000589174 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 YBX3P16989 372 aaKnown RBP eCLIP15.41■□□□□ 0.064e-6■□□□□ 8.3
MRPL54-202ENST00000589174 TATP17735 454 aaPredicted RBP15.41■□□□□ 0.06
MRPL54-202ENST00000589174 MSL1Q68DK7 614 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 RAPGEF4Q8WZA2 1011 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
MRPL54-202ENST00000589174 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
MRPL54-202ENST00000589174 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
MRPL54-202ENST00000589174 EYA1Q99502 592 aa15.4■□□□□ 0.06
MRPL54-202ENST00000589174 MPRIPQ6WCQ1 1025 aa15.39■□□□□ 0.05
MRPL54-202ENST00000589174 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
MRPL54-202ENST00000589174 PIGBQ92521 554 aa15.39■□□□□ 0.05
MRPL54-202ENST00000589174 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
MRPL54-202ENST00000589174 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
MRPL54-202ENST00000589174 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
MRPL54-202ENST00000589174 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
MRPL54-202ENST00000589174 POLD1P28340 1107 aa15.36■□□□□ 0.05
MRPL54-202ENST00000589174 GPR162Q16538 588 aa15.36■□□□□ 0.05
MRPL54-202ENST00000589174 ITPK1Q13572 414 aa15.35■□□□□ 0.05
MRPL54-202ENST00000589174 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
MRPL54-202ENST00000589174 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
MRPL54-202ENST00000589174 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
MRPL54-202ENST00000589174 CDCA8Q53HL2 280 aa15.34■□□□□ 0.05
MRPL54-202ENST00000589174 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
MRPL54-202ENST00000589174 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
MRPL54-202ENST00000589174 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.05
MRPL54-202ENST00000589174 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
MRPL54-202ENST00000589174 SLC4A9Q96Q91 983 aa15.33■□□□□ 0.04
MRPL54-202ENST00000589174 MSH5O43196 834 aa15.32■□□□□ 0.04
MRPL54-202ENST00000589174 PHKG2P15735 406 aa15.32■□□□□ 0.04
MRPL54-202ENST00000589174 KDRP35968 1356 aa15.32■□□□□ 0.04
MRPL54-202ENST00000589174 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
MRPL54-202ENST00000589174 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
MRPL54-202ENST00000589174 KDM6AO15550 1401 aaPredicted RBP15.31■□□□□ 0.04
MRPL54-202ENST00000589174 ZNF831Q5JPB2 1677 aa15.31■□□□□ 0.04
MRPL54-202ENST00000589174 KIF13BQ9NQT8 1826 aa15.31■□□□□ 0.04
MRPL54-202ENST00000589174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
MRPL54-202ENST00000589174 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
MRPL54-202ENST00000589174 SIK1P57059 783 aa15.3■□□□□ 0.04
MRPL54-202ENST00000589174 IGSF1Q8N6C5 1336 aa15.3■□□□□ 0.04
MRPL54-202ENST00000589174 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
MRPL54-202ENST00000589174 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
MRPL54-202ENST00000589174 PHF14O94880 888 aa15.29■□□□□ 0.04
MRPL54-202ENST00000589174 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
MRPL54-202ENST00000589174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.29■□□□□ 0.04
MRPL54-202ENST00000589174 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
MRPL54-202ENST00000589174 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
MRPL54-202ENST00000589174 ADCY9O60503 1353 aa15.28■□□□□ 0.04
MRPL54-202ENST00000589174 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
MRPL54-202ENST00000589174 WWC3Q9ULE0 1092 aa15.28■□□□□ 0.04
MRPL54-202ENST00000589174 TJP1Q07157 1748 aa15.27■□□□□ 0.04
MRPL54-202ENST00000589174 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.04
MRPL54-202ENST00000589174 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
MRPL54-202ENST00000589174 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms