RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
APOC1-204ENST00000589078 IP6K1Q92551 441 aa13.21□□□□□ -0.29
APOC1-204ENST00000589078 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
APOC1-204ENST00000589078 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
APOC1-204ENST00000589078 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
APOC1-204ENST00000589078 QSER1Q2KHR3 1735 aa13.2□□□□□ -0.3
APOC1-204ENST00000589078 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
APOC1-204ENST00000589078 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
APOC1-204ENST00000589078 CARD10Q9BWT7 1032 aa13.19□□□□□ -0.3
APOC1-204ENST00000589078 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
APOC1-204ENST00000589078 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
APOC1-204ENST00000589078 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
APOC1-204ENST00000589078 ERBB3P21860 1342 aa13.18□□□□□ -0.3
APOC1-204ENST00000589078 HOXC9P31274 260 aa13.18□□□□□ -0.3
APOC1-204ENST00000589078 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
APOC1-204ENST00000589078 GPR162Q16538 588 aa13.18□□□□□ -0.3
APOC1-204ENST00000589078 ANKRD24Q8TF21 1146 aa13.18□□□□□ -0.3
APOC1-204ENST00000589078 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
APOC1-204ENST00000589078 EXOC5O00471 708 aa13.17□□□□□ -0.3
APOC1-204ENST00000589078 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
APOC1-204ENST00000589078 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
APOC1-204ENST00000589078 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
APOC1-204ENST00000589078 FLT4P35916 1363 aa13.17□□□□□ -0.3
APOC1-204ENST00000589078 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
APOC1-204ENST00000589078 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
APOC1-204ENST00000589078 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
APOC1-204ENST00000589078 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
APOC1-204ENST00000589078 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
APOC1-204ENST00000589078 FBLN1P23142 703 aa13.15□□□□□ -0.3
APOC1-204ENST00000589078 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
APOC1-204ENST00000589078 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
APOC1-204ENST00000589078 LTN1O94822 1766 aa13.15□□□□□ -0.31
APOC1-204ENST00000589078 INSRP06213 1382 aa13.13□□□□□ -0.31
APOC1-204ENST00000589078 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
APOC1-204ENST00000589078 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
APOC1-204ENST00000589078 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
APOC1-204ENST00000589078 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
APOC1-204ENST00000589078 CC2D1BQ5T0F9 858 aaKnown RBP13.12□□□□□ -0.31
APOC1-204ENST00000589078 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
APOC1-204ENST00000589078 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
APOC1-204ENST00000589078 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
APOC1-204ENST00000589078 IL2RBP14784 551 aa13.11□□□□□ -0.31
APOC1-204ENST00000589078 POLD1P28340 1107 aa13.11□□□□□ -0.31
APOC1-204ENST00000589078 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
APOC1-204ENST00000589078 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
APOC1-204ENST00000589078 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
APOC1-204ENST00000589078 LY75O60449 1722 aa13.09□□□□□ -0.31
APOC1-204ENST00000589078 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
APOC1-204ENST00000589078 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
APOC1-204ENST00000589078 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
APOC1-204ENST00000589078 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
APOC1-204ENST00000589078 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
APOC1-204ENST00000589078 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
APOC1-204ENST00000589078 NBPF6Q5VWK0 638 aa13.07□□□□□ -0.32
APOC1-204ENST00000589078 NBPF4Q96M43 638 aa13.07□□□□□ -0.32
APOC1-204ENST00000589078 FAM208AQ9UK61 1670 aaKnown RBP13.07□□□□□ -0.32
APOC1-204ENST00000589078 ANKRD26Q9UPS8 1709 aa13.06□□□□□ -0.32
APOC1-204ENST00000589078 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
APOC1-204ENST00000589078 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
APOC1-204ENST00000589078 MTHFSP49914 203 aa13.05□□□□□ -0.32
APOC1-204ENST00000589078 KCNQ4P56696 695 aa13.05□□□□□ -0.32
APOC1-204ENST00000589078 EIF4A2Q14240 407 aaKnown RBP13.05□□□□□ -0.32
APOC1-204ENST00000589078 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
APOC1-204ENST00000589078 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
APOC1-204ENST00000589078 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
APOC1-204ENST00000589078 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
APOC1-204ENST00000589078 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
APOC1-204ENST00000589078 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
APOC1-204ENST00000589078 EYA1Q99502 592 aa13.03□□□□□ -0.32
APOC1-204ENST00000589078 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
APOC1-204ENST00000589078 C5P01031 1676 aa13.02□□□□□ -0.33
APOC1-204ENST00000589078 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
APOC1-204ENST00000589078 ADCY9O60503 1353 aa13.01□□□□□ -0.33
APOC1-204ENST00000589078 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
APOC1-204ENST00000589078 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
APOC1-204ENST00000589078 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
APOC1-204ENST00000589078 MSH5O43196 834 aa13□□□□□ -0.33
APOC1-204ENST00000589078 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
APOC1-204ENST00000589078 HSPA6P17066 643 aa13□□□□□ -0.33
APOC1-204ENST00000589078 MSL1Q68DK7 614 aa13□□□□□ -0.33
APOC1-204ENST00000589078 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
APOC1-204ENST00000589078 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
APOC1-204ENST00000589078 SPG7Q9UQ90 795 aa13□□□□□ -0.33
APOC1-204ENST00000589078 MEGF6O75095 1541 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 IL13P35225 146 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
APOC1-204ENST00000589078 RALBP1Q15311 655 aa12.99□□□□□ -0.33
APOC1-204ENST00000589078 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
APOC1-204ENST00000589078 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
APOC1-204ENST00000589078 COL23A1Q86Y22 540 aaPredicted RBP12.98□□□□□ -0.33
APOC1-204ENST00000589078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
APOC1-204ENST00000589078 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
APOC1-204ENST00000589078 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
APOC1-204ENST00000589078 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
APOC1-204ENST00000589078 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
APOC1-204ENST00000589078 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
APOC1-204ENST00000589078 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms