RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-207ENST00000589007 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 MEGF6O75095 1541 aa12.36□□□□□ -0.43
RETREG3-207ENST00000589007 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-207ENST00000589007 STAC3Q96MF2 364 aa12.34□□□□□ -0.43
RETREG3-207ENST00000589007 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-207ENST00000589007 IL2RBP14784 551 aa12.33□□□□□ -0.44
RETREG3-207ENST00000589007 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
RETREG3-207ENST00000589007 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
RETREG3-207ENST00000589007 SBNO2Q9Y2G9 1366 aa12.32□□□□□ -0.44
RETREG3-207ENST00000589007 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
RETREG3-207ENST00000589007 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
RETREG3-207ENST00000589007 PXDNLA1KZ92 1463 aa12.32□□□□□ -0.44
RETREG3-207ENST00000589007 TTC21AQ8NDW8 1320 aa12.32□□□□□ -0.44
RETREG3-207ENST00000589007 SBF1O95248 1867 aa12.31□□□□□ -0.44
RETREG3-207ENST00000589007 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
RETREG3-207ENST00000589007 APLP1P51693 650 aa12.31□□□□□ -0.44
RETREG3-207ENST00000589007 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
RETREG3-207ENST00000589007 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
RETREG3-207ENST00000589007 SOX12O15370 315 aa12.3□□□□□ -0.44
RETREG3-207ENST00000589007 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
RETREG3-207ENST00000589007 C4AP0C0L4 1744 aa12.3□□□□□ -0.44
RETREG3-207ENST00000589007 IGSF1Q8N6C5 1336 aa12.3□□□□□ -0.44
RETREG3-207ENST00000589007 HTRA3P83110 453 aa12.29□□□□□ -0.44
RETREG3-207ENST00000589007 SLC34A2O95436 690 aa12.28□□□□□ -0.44
RETREG3-207ENST00000589007 PRELPP51888 382 aa12.28□□□□□ -0.44
RETREG3-207ENST00000589007 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-207ENST00000589007 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
RETREG3-207ENST00000589007 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
RETREG3-207ENST00000589007 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
RETREG3-207ENST00000589007 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
RETREG3-207ENST00000589007 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
RETREG3-207ENST00000589007 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
RETREG3-207ENST00000589007 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-207ENST00000589007 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
RETREG3-207ENST00000589007 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
RETREG3-207ENST00000589007 CAPN15O75808 1086 aa12.24□□□□□ -0.45
RETREG3-207ENST00000589007 TOMM70O94826 608 aa12.24□□□□□ -0.45
RETREG3-207ENST00000589007 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
RETREG3-207ENST00000589007 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
RETREG3-207ENST00000589007 NME9Q86XW9 330 aa12.24□□□□□ -0.45
RETREG3-207ENST00000589007 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
RETREG3-207ENST00000589007 ADAMTS7Q9UKP4 1686 aa12.23□□□□□ -0.45
RETREG3-207ENST00000589007 ANKRD26Q9UPS8 1709 aa12.23□□□□□ -0.45
RETREG3-207ENST00000589007 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
RETREG3-207ENST00000589007 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
RETREG3-207ENST00000589007 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.45
RETREG3-207ENST00000589007 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-207ENST00000589007 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
RETREG3-207ENST00000589007 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
RETREG3-207ENST00000589007 PALLDQ8WX93 1383 aa12.2□□□□□ -0.46
RETREG3-207ENST00000589007 EVC2Q86UK5 1308 aa12.2□□□□□ -0.46
RETREG3-207ENST00000589007 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
RETREG3-207ENST00000589007 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
RETREG3-207ENST00000589007 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
RETREG3-207ENST00000589007 USP47Q96K76 1375 aa12.19□□□□□ -0.46
RETREG3-207ENST00000589007 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
RETREG3-207ENST00000589007 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
RETREG3-207ENST00000589007 IP6K1Q92551 441 aa12.18□□□□□ -0.46
RETREG3-207ENST00000589007 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-207ENST00000589007 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
RETREG3-207ENST00000589007 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
RETREG3-207ENST00000589007 MSH5O43196 834 aa12.16□□□□□ -0.46
RETREG3-207ENST00000589007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.16□□□□□ -0.46
RETREG3-207ENST00000589007 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-207ENST00000589007 KDRP35968 1356 aa12.16□□□□□ -0.46
RETREG3-207ENST00000589007 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
RETREG3-207ENST00000589007 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
RETREG3-207ENST00000589007 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
RETREG3-207ENST00000589007 TJP1Q07157 1748 aa12.14□□□□□ -0.47
RETREG3-207ENST00000589007 NRXN2Q9P2S2 1712 aa12.14□□□□□ -0.47
RETREG3-207ENST00000589007 HOXC9P31274 260 aa12.14□□□□□ -0.47
RETREG3-207ENST00000589007 LINC00116Q8NCU8 138 aa12.14□□□□□ -0.47
RETREG3-207ENST00000589007 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
RETREG3-207ENST00000589007 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
RETREG3-207ENST00000589007 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
RETREG3-207ENST00000589007 TNRC18O15417 2968 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-207ENST00000589007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
RETREG3-207ENST00000589007 HSPA1AP0DMV8 641 aaKnown RBP12.13□□□□□ -0.47
RETREG3-207ENST00000589007 HSPA1BP0DMV9 641 aaKnown RBP12.13□□□□□ -0.47
RETREG3-207ENST00000589007 KCNA3P22001 575 aa12.13□□□□□ -0.47
RETREG3-207ENST00000589007 FBLN1P23142 703 aa12.13□□□□□ -0.47
RETREG3-207ENST00000589007 FSTL1Q12841 308 aa12.13□□□□□ -0.47
RETREG3-207ENST00000589007 FLAD1Q8NFF5 587 aa12.13□□□□□ -0.47
RETREG3-207ENST00000589007 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
RETREG3-207ENST00000589007 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
RETREG3-207ENST00000589007 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
RETREG3-207ENST00000589007 CYP27B1O15528 508 aa12.11□□□□□ -0.47
RETREG3-207ENST00000589007 SSFA2P28290 1259 aa12.11□□□□□ -0.47
RETREG3-207ENST00000589007 ITPK1Q13572 414 aa12.11□□□□□ -0.47
RETREG3-207ENST00000589007 PHF14O94880 888 aa12.1□□□□□ -0.47
RETREG3-207ENST00000589007 USHBP1Q8N6Y0 703 aa12.1□□□□□ -0.47
RETREG3-207ENST00000589007 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-207ENST00000589007 THSD7BQ9C0I4 1608 aa12.09□□□□□ -0.47
RETREG3-207ENST00000589007 A0A0G2JLW4 131 aa12.08□□□□□ -0.48
RETREG3-207ENST00000589007 MMP10P09238 476 aa12.08□□□□□ -0.48
RETREG3-207ENST00000589007 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
RETREG3-207ENST00000589007 DCAF5Q96JK2 942 aa12.08□□□□□ -0.48
RETREG3-207ENST00000589007 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms