RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
GFAP-215ENST00000588957 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
GFAP-215ENST00000588957 GAS2L2Q8NHY3 880 aa18.98■□□□□ 0.63
GFAP-215ENST00000588957 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
GFAP-215ENST00000588957 RGPD5Q99666 1765 aa18.97■□□□□ 0.63
GFAP-215ENST00000588957 DDB1Q16531 1140 aa18.97■□□□□ 0.63
GFAP-215ENST00000588957 FAM98CQ17RN3 349 aaKnown RBP18.97■□□□□ 0.63
GFAP-215ENST00000588957 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
GFAP-215ENST00000588957 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
GFAP-215ENST00000588957 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
GFAP-215ENST00000588957 PDE3BQ13370 1112 aa18.95■□□□□ 0.62
GFAP-215ENST00000588957 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
GFAP-215ENST00000588957 C1orf141Q5JVX7 400 aa18.94■□□□□ 0.62
GFAP-215ENST00000588957 IFNL2Q8IZJ0 200 aa18.93■□□□□ 0.62
GFAP-215ENST00000588957 PLEKHF1Q96S99 279 aa18.93■□□□□ 0.62
GFAP-215ENST00000588957 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
GFAP-215ENST00000588957 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
GFAP-215ENST00000588957 OVOS2A0A0G2JMS6 1433 aa18.92■□□□□ 0.62
GFAP-215ENST00000588957 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
GFAP-215ENST00000588957 POTEAQ6S8J7 498 aa18.92■□□□□ 0.62
GFAP-215ENST00000588957 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
GFAP-215ENST00000588957 DISP2A7MBM2 1401 aa18.91■□□□□ 0.62
GFAP-215ENST00000588957 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
GFAP-215ENST00000588957 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
GFAP-215ENST00000588957 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
GFAP-215ENST00000588957 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
GFAP-215ENST00000588957 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
GFAP-215ENST00000588957 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
GFAP-215ENST00000588957 GNAT3A8MTJ3 354 aa18.88■□□□□ 0.61
GFAP-215ENST00000588957 DDX54Q8TDD1 881 aaKnown RBP18.88■□□□□ 0.61
GFAP-215ENST00000588957 PHACTR3Q96KR7 559 aa18.88■□□□□ 0.61
GFAP-215ENST00000588957 MEGF6O75095 1541 aa18.87■□□□□ 0.61
GFAP-215ENST00000588957 MTHFSDQ2M296 383 aaKnown RBP18.87■□□□□ 0.61
GFAP-215ENST00000588957 KRT27Q7Z3Y8 459 aa18.87■□□□□ 0.61
GFAP-215ENST00000588957 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
GFAP-215ENST00000588957 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
GFAP-215ENST00000588957 APAF1O14727 1248 aa18.86■□□□□ 0.61
GFAP-215ENST00000588957 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
GFAP-215ENST00000588957 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
GFAP-215ENST00000588957 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
GFAP-215ENST00000588957 GLI3P10071 1580 aa18.85■□□□□ 0.61
GFAP-215ENST00000588957 PHKG2P15735 406 aa18.85■□□□□ 0.61
GFAP-215ENST00000588957 RIPK4P57078 832 aa18.85■□□□□ 0.61
GFAP-215ENST00000588957 NKX1-1Q15270 411 aaPredicted RBP18.85■□□□□ 0.61
GFAP-215ENST00000588957 PARP4Q9UKK3 1724 aaKnown RBP18.84■□□□□ 0.61
GFAP-215ENST00000588957 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
GFAP-215ENST00000588957 FAM196AQ6ZSG2 479 aa18.84■□□□□ 0.61
GFAP-215ENST00000588957 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
GFAP-215ENST00000588957 CYP27B1O15528 508 aa18.83■□□□□ 0.6
GFAP-215ENST00000588957 ILDR2Q71H61 639 aa18.83■□□□□ 0.6
GFAP-215ENST00000588957 ERVV-2B6SEH9 535 aa18.82■□□□□ 0.6
GFAP-215ENST00000588957 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
GFAP-215ENST00000588957 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
GFAP-215ENST00000588957 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
GFAP-215ENST00000588957 BCL9O00512 1426 aa18.8■□□□□ 0.6
GFAP-215ENST00000588957 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
GFAP-215ENST00000588957 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
GFAP-215ENST00000588957 TEFQ10587 303 aa18.78■□□□□ 0.6
GFAP-215ENST00000588957 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
GFAP-215ENST00000588957 CABP4P57796 275 aa18.77■□□□□ 0.6
GFAP-215ENST00000588957 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
GFAP-215ENST00000588957 BABAM1Q9NWV8 329 aa18.77■□□□□ 0.6
GFAP-215ENST00000588957 RGS12O14924 1447 aa18.76■□□□□ 0.59
GFAP-215ENST00000588957 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
GFAP-215ENST00000588957 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
GFAP-215ENST00000588957 PKD1L3Q7Z443 1732 aa18.76■□□□□ 0.59
GFAP-215ENST00000588957 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
GFAP-215ENST00000588957 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
GFAP-215ENST00000588957 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
GFAP-215ENST00000588957 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
GFAP-215ENST00000588957 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
GFAP-215ENST00000588957 TAF7Q15545 349 aaPredicted RBP18.73■□□□□ 0.59
GFAP-215ENST00000588957 SLC52A2Q9HAB3 445 aa18.73■□□□□ 0.59
GFAP-215ENST00000588957 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
GFAP-215ENST00000588957 LRRC37A3O60309 1634 aa18.73■□□□□ 0.59
GFAP-215ENST00000588957 IL16Q14005 1332 aa18.73■□□□□ 0.59
GFAP-215ENST00000588957 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
GFAP-215ENST00000588957 CCDC125Q86Z20 511 aa18.72■□□□□ 0.59
GFAP-215ENST00000588957 SYTL4Q96C24 671 aaPredicted RBP18.72■□□□□ 0.59
GFAP-215ENST00000588957 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
GFAP-215ENST00000588957 LGR6Q9HBX8 967 aa18.72■□□□□ 0.59
GFAP-215ENST00000588957 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
GFAP-215ENST00000588957 GNAI1P63096 354 aa18.71■□□□□ 0.59
GFAP-215ENST00000588957 MCM10Q7L590 875 aa18.71■□□□□ 0.59
GFAP-215ENST00000588957 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
GFAP-215ENST00000588957 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
GFAP-215ENST00000588957 SALL2Q9Y467 1007 aaPredicted RBP18.7■□□□□ 0.58
GFAP-215ENST00000588957 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
GFAP-215ENST00000588957 SF3B2Q13435 895 aaKnown RBP18.69■□□□□ 0.58
GFAP-215ENST00000588957 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
GFAP-215ENST00000588957 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
GFAP-215ENST00000588957 IFT57Q9NWB7 429 aa18.69■□□□□ 0.58
GFAP-215ENST00000588957 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
GFAP-215ENST00000588957 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
GFAP-215ENST00000588957 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
GFAP-215ENST00000588957 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
GFAP-215ENST00000588957 ZBED9Q6R2W3 1325 aa18.68■□□□□ 0.58
GFAP-215ENST00000588957 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
GFAP-215ENST00000588957 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
GFAP-215ENST00000588957 E9PSI1 815 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms