RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
MBD1-217ENST00000588937 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
MBD1-217ENST00000588937 KIAA0232Q92628 1395 aa19.34■□□□□ 0.69
MBD1-217ENST00000588937 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
MBD1-217ENST00000588937 HOXC9P31274 260 aa19.33■□□□□ 0.68
MBD1-217ENST00000588937 EYA1Q99502 592 aa19.33■□□□□ 0.68
MBD1-217ENST00000588937 C1orf167Q5SNV9 1468 aa19.33■□□□□ 0.68
MBD1-217ENST00000588937 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
MBD1-217ENST00000588937 HTATSF1O43719 755 aaKnown RBP19.32■□□□□ 0.68
MBD1-217ENST00000588937 MST1RQ04912 1400 aa19.32■□□□□ 0.68
MBD1-217ENST00000588937 MCM10Q7L590 875 aa19.32■□□□□ 0.68
MBD1-217ENST00000588937 ABCC4O15439 1325 aa19.31■□□□□ 0.68
MBD1-217ENST00000588937 MTHFSDQ2M296 383 aaKnown RBP19.31■□□□□ 0.68
MBD1-217ENST00000588937 CRB1P82279 1406 aa19.31■□□□□ 0.68
MBD1-217ENST00000588937 PSME1Q06323 249 aa19.3■□□□□ 0.68
MBD1-217ENST00000588937 CADPS2Q86UW7 1296 aa19.3■□□□□ 0.68
MBD1-217ENST00000588937 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
MBD1-217ENST00000588937 ESCO1Q5FWF5 840 aa19.29■□□□□ 0.68
MBD1-217ENST00000588937 NUTM2GQ5VZR2 741 aa19.29■□□□□ 0.68
MBD1-217ENST00000588937 MSH6P52701 1360 aa19.29■□□□□ 0.68
MBD1-217ENST00000588937 ZBTB7BO15156 539 aaPredicted RBP19.29■□□□□ 0.68
MBD1-217ENST00000588937 ZNF335Q9H4Z2 1342 aaPredicted RBP19.28■□□□□ 0.68
MBD1-217ENST00000588937 LTN1O94822 1766 aa19.28■□□□□ 0.68
MBD1-217ENST00000588937 ATF3P18847 181 aa19.28■□□□□ 0.68
MBD1-217ENST00000588937 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
MBD1-217ENST00000588937 IP6K1Q92551 441 aa19.25■□□□□ 0.67
MBD1-217ENST00000588937 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
MBD1-217ENST00000588937 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
MBD1-217ENST00000588937 PTPRCP08575 1304 aa19.25■□□□□ 0.67
MBD1-217ENST00000588937 NFAT5O94916 1531 aa19.25■□□□□ 0.67
MBD1-217ENST00000588937 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
MBD1-217ENST00000588937 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
MBD1-217ENST00000588937 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
MBD1-217ENST00000588937 GNAT3A8MTJ3 354 aa19.24■□□□□ 0.67
MBD1-217ENST00000588937 GCC1Q96CN9 775 aa19.24■□□□□ 0.67
MBD1-217ENST00000588937 UPF2Q9HAU5 1272 aaKnown RBP19.24■□□□□ 0.67
MBD1-217ENST00000588937 LRRC37A3O60309 1634 aa19.24■□□□□ 0.67
MBD1-217ENST00000588937 FOXO3O43524 673 aa19.23■□□□□ 0.67
MBD1-217ENST00000588937 BABAM1Q9NWV8 329 aa19.23■□□□□ 0.67
MBD1-217ENST00000588937 NUCB1Q02818 461 aa19.22■□□□□ 0.67
MBD1-217ENST00000588937 INTS3Q68E01 1043 aaKnown RBP19.21■□□□□ 0.67
MBD1-217ENST00000588937 MAP3K5Q99683 1374 aa19.21■□□□□ 0.67
MBD1-217ENST00000588937 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
MBD1-217ENST00000588937 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
MBD1-217ENST00000588937 KRT24Q2M2I5 525 aa19.19■□□□□ 0.66
MBD1-217ENST00000588937 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
MBD1-217ENST00000588937 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
MBD1-217ENST00000588937 SLIT3O75094 1523 aa19.18■□□□□ 0.66
MBD1-217ENST00000588937 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
MBD1-217ENST00000588937 USP19O94966 1318 aa19.17■□□□□ 0.66
MBD1-217ENST00000588937 RGS12O14924 1447 aa19.17■□□□□ 0.66
MBD1-217ENST00000588937 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
MBD1-217ENST00000588937 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
MBD1-217ENST00000588937 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
MBD1-217ENST00000588937 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
MBD1-217ENST00000588937 SEC24BO95487 1268 aa19.15■□□□□ 0.66
MBD1-217ENST00000588937 TAF7Q15545 349 aaPredicted RBP19.15■□□□□ 0.66
MBD1-217ENST00000588937 STK31Q9BXU1 1019 aa19.15■□□□□ 0.66
MBD1-217ENST00000588937 C1orf115Q9H7X2 142 aa19.15■□□□□ 0.66
MBD1-217ENST00000588937 GCP02774 474 aa19.14■□□□□ 0.65
MBD1-217ENST00000588937 CCDC30Q5VVM6 783 aa19.14■□□□□ 0.65
MBD1-217ENST00000588937 LNPKQ9C0E8 428 aa19.14■□□□□ 0.65
MBD1-217ENST00000588937 PXDNQ92626 1479 aa19.13■□□□□ 0.65
MBD1-217ENST00000588937 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
MBD1-217ENST00000588937 IL17REQ8NFR9 667 aa19.13■□□□□ 0.65
MBD1-217ENST00000588937 SLAIN2Q9P270 581 aa19.13■□□□□ 0.65
MBD1-217ENST00000588937 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
MBD1-217ENST00000588937 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
MBD1-217ENST00000588937 BECN1Q14457 450 aa19.12■□□□□ 0.65
MBD1-217ENST00000588937 ARHGEF25Q86VW2 580 aa19.12■□□□□ 0.65
MBD1-217ENST00000588937 RPAP2Q8IXW5 612 aaPredicted RBP19.12■□□□□ 0.65
MBD1-217ENST00000588937 NBR1Q14596 966 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
MBD1-217ENST00000588937 NBPF6Q5VWK0 638 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 BRINP3Q76B58 766 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 SIRT2Q8IXJ6 389 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 NBPF4Q96M43 638 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
MBD1-217ENST00000588937 AMOTQ4VCS5 1084 aa19.1■□□□□ 0.65
MBD1-217ENST00000588937 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
MBD1-217ENST00000588937 ANKRD44Q8N8A2 993 aa19.1■□□□□ 0.65
MBD1-217ENST00000588937 FAM208AQ9UK61 1670 aaKnown RBP19.1■□□□□ 0.65
MBD1-217ENST00000588937 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
MBD1-217ENST00000588937 NCAPD2Q15021 1401 aa19.09■□□□□ 0.65
MBD1-217ENST00000588937 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
MBD1-217ENST00000588937 BMP2KLQ5H9B9 411 aa19.09■□□□□ 0.65
MBD1-217ENST00000588937 LMOD2Q6P5Q4 547 aa19.09■□□□□ 0.65
MBD1-217ENST00000588937 DCTPP1Q9H773 170 aa19.09■□□□□ 0.65
MBD1-217ENST00000588937 RGPD2P0DJD1 1756 aa19.08■□□□□ 0.65
MBD1-217ENST00000588937 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
MBD1-217ENST00000588937 USP35Q9P2H5 1018 aa19.08■□□□□ 0.64
MBD1-217ENST00000588937 NHSL1Q5SYE7 1610 aa19.08■□□□□ 0.64
MBD1-217ENST00000588937 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.64
MBD1-217ENST00000588937 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
MBD1-217ENST00000588937 AKAP4Q5JQC9 854 aa19.07■□□□□ 0.64
MBD1-217ENST00000588937 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
MBD1-217ENST00000588937 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms