RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 BABAM1Q9NWV8 329 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 CHMP5Q9NZZ3 219 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 PTPRUQ92729 1446 aa8.94□□□□□ -0.98
SPIDR-228ENST00000588781 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.94□□□□□ -0.98
SPIDR-228ENST00000588781 RBM25P49756 843 aaKnown RBP8.93□□□□□ -0.98
SPIDR-228ENST00000588781 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
SPIDR-228ENST00000588781 ANKRD45Q5TZF3 282 aa8.93□□□□□ -0.98
SPIDR-228ENST00000588781 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
SPIDR-228ENST00000588781 NGDNQ8NEJ9 315 aaKnown RBP8.93□□□□□ -0.98
SPIDR-228ENST00000588781 SNX21Q969T3 373 aa8.93□□□□□ -0.98
SPIDR-228ENST00000588781 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
SPIDR-228ENST00000588781 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 NPHP4O75161 1426 aaPredicted RBP8.92□□□□□ -0.98
SPIDR-228ENST00000588781 SSH2Q76I76 1423 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 RTL1A6NKG5 1358 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 SEC24BO95487 1268 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 AMPHP49418 695 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 CCT4P50991 539 aaKnown RBP8.92□□□□□ -0.98
SPIDR-228ENST00000588781 L1TD1Q5T7N2 865 aaKnown RBP8.92□□□□□ -0.98
SPIDR-228ENST00000588781 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
SPIDR-228ENST00000588781 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
SPIDR-228ENST00000588781 RGPD1P0DJD0 1748 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 CDC45O75419 566 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 LTKP29376 864 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 C8orf58Q8NAV2 365 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 IL27Q8NEV9 243 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 THUMPD2Q9BTF0 503 aaKnown RBP8.91□□□□□ -0.98
SPIDR-228ENST00000588781 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 LNPKQ9C0E8 428 aa8.91□□□□□ -0.98
SPIDR-228ENST00000588781 XIRP1Q702N8 1843 aaKnown RBP8.91□□□□□ -0.98
SPIDR-228ENST00000588781 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
SPIDR-228ENST00000588781 ANKRD44Q8N8A2 993 aa8.9□□□□□ -0.98
SPIDR-228ENST00000588781 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
SPIDR-228ENST00000588781 STK31Q9BXU1 1019 aa8.9□□□□□ -0.98
SPIDR-228ENST00000588781 FMN2Q9NZ56 1722 aa8.9□□□□□ -0.98
SPIDR-228ENST00000588781 USP54Q70EL1 1684 aa8.9□□□□□ -0.98
SPIDR-228ENST00000588781 KDRP35968 1356 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 XRN1Q8IZH2 1706 aaKnown RBP8.89□□□□□ -0.99
SPIDR-228ENST00000588781 IGSF1Q8N6C5 1336 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 DDX11L8A8MPP1 907 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 FRAT2O75474 233 aaPredicted RBP8.89□□□□□ -0.99
SPIDR-228ENST00000588781 FBLN1P23142 703 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 DCTPP1Q9H773 170 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 TSPYL4Q9UJ04 414 aa8.89□□□□□ -0.99
SPIDR-228ENST00000588781 CRB1P82279 1406 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 ELL2O00472 640 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-228ENST00000588781 HSP90AB1P08238 724 aaKnown RBP8.88□□□□□ -0.99
SPIDR-228ENST00000588781 GNAI3P08754 354 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 SLC26A8Q96RN1 970 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 SLKQ9H2G2 1235 aaPredicted RBP8.88□□□□□ -0.99
SPIDR-228ENST00000588781 ANTXR1Q9H6X2 564 aa8.88□□□□□ -0.99
SPIDR-228ENST00000588781 ISY1Q9ULR0 285 aaKnown RBP8.88□□□□□ -0.99
SPIDR-228ENST00000588781 FAM83GA6ND36 823 aa8.87□□□□□ -0.99
SPIDR-228ENST00000588781 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
SPIDR-228ENST00000588781 HSP90AB2PQ58FF8 381 aa8.87□□□□□ -0.99
SPIDR-228ENST00000588781 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
SPIDR-228ENST00000588781 GBP4Q96PP9 640 aa8.87□□□□□ -0.99
SPIDR-228ENST00000588781 PEAK1Q9H792 1746 aa8.87□□□□□ -0.99
SPIDR-228ENST00000588781 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 NLRP6P59044 892 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 DCTN1Q14203 1278 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 RABEP1Q15276 862 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 SKOR2Q2VWA4 1001 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-228ENST00000588781 HDAC5Q9UQL6 1122 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 ADGRL3Q9HAR2 1447 aa8.86□□□□□ -0.99
SPIDR-228ENST00000588781 PXDNLA1KZ92 1463 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 GOLGA6L22H0YM25 854 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 REC8O95072 547 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 GNAI2P04899 355 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 MCM4P33991 863 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 TTC22Q5TAA0 569 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 CEP85Q6P2H3 762 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 MCM10Q7L590 875 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 C1orf115Q9H7X2 142 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 NCOA3Q9Y6Q9 1424 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
SPIDR-228ENST00000588781 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 HOXB7P09629 217 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 MTHFSDQ2M296 383 aaKnown RBP8.84□□□□□ -0.99
SPIDR-228ENST00000588781 PLEKHM2Q8IWE5 1019 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 SIRT2Q8IXJ6 389 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 EYA1Q99502 592 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 SRCIN1Q9C0H9 1055 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 ROBO1Q9Y6N7 1651 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 MSH6P52701 1360 aa8.84□□□□□ -0.99
SPIDR-228ENST00000588781 LRRC37A3O60309 1634 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 CACNA1FO60840 1977 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 RGS12O14924 1447 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 ATP10DQ9P241 1426 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 K7ELQ4 463 aaPredicted RBP8.83□□□□□ -1
SPIDR-228ENST00000588781 MCCP23508 829 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 HOXC9P31274 260 aa8.83□□□□□ -1
SPIDR-228ENST00000588781 TAF7Q15545 349 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms