RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 NAA25Q14CX7 972 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 CCAR2Q8N163 923 aaKnown RBP9.18□□□□□ -0.94
LAMA3-210ENST00000588770 KLHL23Q8NBE8 558 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 ROCK2O75116 1388 aaKnown RBP9.18□□□□□ -0.94
LAMA3-210ENST00000588770 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
LAMA3-210ENST00000588770 GOLGA6L10A6NI86 522 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 ERLIN2O94905 339 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 RLBP1P12271 317 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 PTPN14Q15678 1187 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 ARMC2Q8NEN0 867 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 SCP2P22307 547 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 MORC1Q86VD1 984 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 SMC5Q8IY18 1101 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 ERO1AQ96HE7 468 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 INCENPQ9NQS7 918 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 PDCD2Q16342 344 aaPredicted RBP9.17□□□□□ -0.94
LAMA3-210ENST00000588770 N4BP2L2Q92802 583 aaPredicted RBP9.17□□□□□ -0.94
LAMA3-210ENST00000588770 KIAA0754O94854 1291 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 ELF2Q15723 593 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 EFCAB13Q8IY85 973 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 KRI1Q8N9T8 703 aaKnown RBP9.17□□□□□ -0.94
LAMA3-210ENST00000588770 NUP133Q8WUM0 1156 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 CENPHQ9H3R5 247 aa9.17□□□□□ -0.94
LAMA3-210ENST00000588770 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 CTIFO43310 598 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 SLU7O95391 586 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 MTA1Q13330 715 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 PAX7P23759 505 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 SWT1Q5T5J6 900 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 SUGP1Q8IWZ8 645 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 ST18O60284 1047 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 PEX19P40855 299 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 GORABQ5T7V8 394 aa9.16□□□□□ -0.94
LAMA3-210ENST00000588770 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
LAMA3-210ENST00000588770 ACTN2P35609 894 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 JPH2Q9BR39 696 aaPredicted RBP9.15□□□□□ -0.94
LAMA3-210ENST00000588770 GNL3LQ9NVN8 582 aaKnown RBP9.15□□□□□ -0.94
LAMA3-210ENST00000588770 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 MAP9Q49MG5 647 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 PACS2Q86VP3 889 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 TEX11Q8IYF3 940 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 KIF2CQ99661 725 aa9.15□□□□□ -0.94
LAMA3-210ENST00000588770 OAS2P29728 719 aaKnown RBP9.15□□□□□ -0.95
LAMA3-210ENST00000588770 KIF7Q2M1P5 1343 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 HOMER1Q86YM7 354 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 SPTLC3Q9NUV7 552 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 MRFAP1Q9Y605 127 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 CTCFLQ8NI51 663 aaPredicted RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 A0A087WUV0 522 aaPredicted RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 CCDC96Q2M329 555 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 GOLGA6L10A0A0M3HER8 536 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 EZRP15311 586 aaKnown RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 ELF1P32519 619 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 BIN2Q9UBW5 565 aaPredicted RBP9.14□□□□□ -0.95
LAMA3-210ENST00000588770 USP19O94966 1318 aa9.14□□□□□ -0.95
LAMA3-210ENST00000588770 CCT2P78371 535 aaKnown RBP9.13□□□□□ -0.95
LAMA3-210ENST00000588770 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 TSHZ1Q6ZSZ6 1077 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 ODF2LQ9ULJ1 636 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 TAX1BP1Q86VP1 789 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 LCMT1Q9UIC8 334 aa9.13□□□□□ -0.95
LAMA3-210ENST00000588770 DCTN1Q14203 1278 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 FBXO38Q6PIJ6 1188 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 CEP57Q86XR8 500 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 SNX21Q969T3 373 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 TRIM5Q9C035 493 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 ENOX2Q16206 610 aaKnown RBP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 TADA2BQ86TJ2 420 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 SCRIBQ14160 1630 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 ADCY2Q08462 1091 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 CHGAP10645 457 aaKnown RBP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 ARHGAP29Q52LW3 1261 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 HDGFL1Q5TGJ6 251 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 TRIM74Q86UV6 250 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 TRIM73Q86UV7 250 aa9.12□□□□□ -0.95
LAMA3-210ENST00000588770 ZNF215Q9UL58 517 aaPredicted RBP9.12□□□□□ -0.95
LAMA3-210ENST00000588770 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 KIAA1524Q8TCG1 905 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms