RNA–Protein interactions for RNA: ENST00000588731.6

SUGP1-209, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-209ENST00000588731 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
SUGP1-209ENST00000588731 IFT57Q9NWB7 429 aa20.51■□□□□ 0.87
SUGP1-209ENST00000588731 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
SUGP1-209ENST00000588731 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
SUGP1-209ENST00000588731 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
SUGP1-209ENST00000588731 ABCC6O95255 1503 aa20.5■□□□□ 0.87
SUGP1-209ENST00000588731 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
SUGP1-209ENST00000588731 WDR17Q8IZU2 1322 aa20.49■□□□□ 0.87
SUGP1-209ENST00000588731 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
SUGP1-209ENST00000588731 GNAI1P63096 354 aa20.49■□□□□ 0.87
SUGP1-209ENST00000588731 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
SUGP1-209ENST00000588731 LARP1Q6PKG0 1096 aaKnown RBP20.48■□□□□ 0.87
SUGP1-209ENST00000588731 BTG4Q9NY30 223 aa20.48■□□□□ 0.87
SUGP1-209ENST00000588731 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
SUGP1-209ENST00000588731 TOM1L2Q6ZVM7 507 aa20.48■□□□□ 0.87
SUGP1-209ENST00000588731 CRB1P82279 1406 aa20.47■□□□□ 0.87
SUGP1-209ENST00000588731 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
SUGP1-209ENST00000588731 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
SUGP1-209ENST00000588731 ZNF530Q6P9A1 599 aaPredicted RBP20.47■□□□□ 0.87
SUGP1-209ENST00000588731 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
SUGP1-209ENST00000588731 BCL2L13Q9BXK5 485 aa20.47■□□□□ 0.87
SUGP1-209ENST00000588731 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
SUGP1-209ENST00000588731 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
SUGP1-209ENST00000588731 CHL1O00533 1208 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
SUGP1-209ENST00000588731 MEGF6O75095 1541 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 COL22A1Q8NFW1 1626 aaPredicted RBP20.46■□□□□ 0.87
SUGP1-209ENST00000588731 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
SUGP1-209ENST00000588731 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
SUGP1-209ENST00000588731 EVA1CP58658 441 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
SUGP1-209ENST00000588731 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
SUGP1-209ENST00000588731 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
SUGP1-209ENST00000588731 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
SUGP1-209ENST00000588731 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
SUGP1-209ENST00000588731 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
SUGP1-209ENST00000588731 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
SUGP1-209ENST00000588731 USP35Q9P2H5 1018 aa20.43■□□□□ 0.86
SUGP1-209ENST00000588731 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
SUGP1-209ENST00000588731 AKAP4Q5JQC9 854 aa20.42■□□□□ 0.86
SUGP1-209ENST00000588731 CARD10Q9BWT7 1032 aa20.42■□□□□ 0.86
SUGP1-209ENST00000588731 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
SUGP1-209ENST00000588731 VAMP4O75379 141 aa20.41■□□□□ 0.86
SUGP1-209ENST00000588731 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
SUGP1-209ENST00000588731 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.86
SUGP1-209ENST00000588731 CYP27B1O15528 508 aa20.39■□□□□ 0.85
SUGP1-209ENST00000588731 CT47B1P0C2W7 299 aaPredicted RBP20.39■□□□□ 0.85
SUGP1-209ENST00000588731 TSPYL4Q9UJ04 414 aa20.39■□□□□ 0.85
SUGP1-209ENST00000588731 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
SUGP1-209ENST00000588731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.38■□□□□ 0.855e-8■■□□□ 11.6
SUGP1-209ENST00000588731 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
SUGP1-209ENST00000588731 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
SUGP1-209ENST00000588731 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
SUGP1-209ENST00000588731 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
SUGP1-209ENST00000588731 HSPA1LP34931 641 aa20.37■□□□□ 0.85
SUGP1-209ENST00000588731 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
SUGP1-209ENST00000588731 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
SUGP1-209ENST00000588731 PHKG2P15735 406 aa20.36■□□□□ 0.85
SUGP1-209ENST00000588731 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
SUGP1-209ENST00000588731 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
SUGP1-209ENST00000588731 COL14A1Q05707 1796 aaKnown RBP20.35■□□□□ 0.85
SUGP1-209ENST00000588731 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
SUGP1-209ENST00000588731 JCADQ9P266 1359 aa20.35■□□□□ 0.85
SUGP1-209ENST00000588731 IL2RBP14784 551 aa20.34■□□□□ 0.85
SUGP1-209ENST00000588731 OVOS2A0A0G2JMS6 1433 aa20.34■□□□□ 0.85
SUGP1-209ENST00000588731 ERICH6BQ5W0A0 696 aa20.34■□□□□ 0.85
SUGP1-209ENST00000588731 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
SUGP1-209ENST00000588731 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
SUGP1-209ENST00000588731 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
SUGP1-209ENST00000588731 KCNQ3O43525 872 aa20.33■□□□□ 0.84
SUGP1-209ENST00000588731 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.84
SUGP1-209ENST00000588731 TEFQ10587 303 aa20.32■□□□□ 0.84
SUGP1-209ENST00000588731 PANK1Q8TE04 598 aa20.32■□□□□ 0.84
SUGP1-209ENST00000588731 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
SUGP1-209ENST00000588731 RLBP1P12271 317 aa20.31■□□□□ 0.84
SUGP1-209ENST00000588731 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
SUGP1-209ENST00000588731 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
SUGP1-209ENST00000588731 ALDH1L2Q3SY69 923 aa20.3■□□□□ 0.84
SUGP1-209ENST00000588731 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
SUGP1-209ENST00000588731 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
SUGP1-209ENST00000588731 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
SUGP1-209ENST00000588731 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
SUGP1-209ENST00000588731 C8orf37Q96NL8 207 aa20.29■□□□□ 0.84
SUGP1-209ENST00000588731 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
SUGP1-209ENST00000588731 NFATC2IPQ8NCF5 419 aa20.29■□□□□ 0.84
SUGP1-209ENST00000588731 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
SUGP1-209ENST00000588731 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
SUGP1-209ENST00000588731 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
SUGP1-209ENST00000588731 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
SUGP1-209ENST00000588731 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
SUGP1-209ENST00000588731 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
SUGP1-209ENST00000588731 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
SUGP1-209ENST00000588731 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
SUGP1-209ENST00000588731 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
SUGP1-209ENST00000588731 SLIT2O94813 1529 aa20.27■□□□□ 0.84
SUGP1-209ENST00000588731 TRIM27P14373 513 aa20.27■□□□□ 0.83
SUGP1-209ENST00000588731 PDE3AQ14432 1141 aa20.27■□□□□ 0.83
SUGP1-209ENST00000588731 PCDH11XQ9BZA7 1347 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms