RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 KIF7Q2M1P5 1343 aa19.84■□□□□ 0.77
DDX39A-208ENST00000588692 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
DDX39A-208ENST00000588692 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
DDX39A-208ENST00000588692 DOT1LQ8TEK3 1739 aa19.84■□□□□ 0.77
DDX39A-208ENST00000588692 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
DDX39A-208ENST00000588692 PPM1GO15355 546 aaPredicted RBP19.83■□□□□ 0.76
DDX39A-208ENST00000588692 USHBP1Q8N6Y0 703 aa19.83■□□□□ 0.76
DDX39A-208ENST00000588692 ACSBG1Q96GR2 724 aa19.83■□□□□ 0.76
DDX39A-208ENST00000588692 POLKQ9UBT6 870 aa19.83■□□□□ 0.76
DDX39A-208ENST00000588692 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
DDX39A-208ENST00000588692 PKD1L3Q7Z443 1732 aa19.81■□□□□ 0.76
DDX39A-208ENST00000588692 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
DDX39A-208ENST00000588692 TXNRD1Q16881 649 aa19.79■□□□□ 0.76
DDX39A-208ENST00000588692 PROM2Q8N271 834 aa19.79■□□□□ 0.76
DDX39A-208ENST00000588692 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
DDX39A-208ENST00000588692 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
DDX39A-208ENST00000588692 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
DDX39A-208ENST00000588692 MORC1Q86VD1 984 aa19.76■□□□□ 0.75
DDX39A-208ENST00000588692 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
DDX39A-208ENST00000588692 PLEKHG2Q9H7P9 1386 aa19.76■□□□□ 0.75
DDX39A-208ENST00000588692 PAPPAQ13219 1627 aa19.76■□□□□ 0.75
DDX39A-208ENST00000588692 EYA1Q99502 592 aa19.75■□□□□ 0.75
DDX39A-208ENST00000588692 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
DDX39A-208ENST00000588692 LY75O60449 1722 aa19.74■□□□□ 0.75
DDX39A-208ENST00000588692 EIF4A2Q14240 407 aaKnown RBP19.73■□□□□ 0.75
DDX39A-208ENST00000588692 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-208ENST00000588692 SYTL4Q96C24 671 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-208ENST00000588692 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
DDX39A-208ENST00000588692 PRIM1P49642 420 aaKnown RBP19.73■□□□□ 0.75
DDX39A-208ENST00000588692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX39A-208ENST00000588692 SLC15A2Q16348 729 aa19.71■□□□□ 0.75
DDX39A-208ENST00000588692 SLC27A3Q5K4L6 730 aa19.71■□□□□ 0.75
DDX39A-208ENST00000588692 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
DDX39A-208ENST00000588692 IGSF1Q8N6C5 1336 aa19.71■□□□□ 0.74
DDX39A-208ENST00000588692 CYP27B1O15528 508 aa19.7■□□□□ 0.74
DDX39A-208ENST00000588692 TOGARAM1Q9Y4F4 1720 aa19.7■□□□□ 0.74
DDX39A-208ENST00000588692 PER1O15534 1290 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-208ENST00000588692 SPON1Q9HCB6 807 aa19.69■□□□□ 0.74
DDX39A-208ENST00000588692 ITGB4P16144 1822 aa19.69■□□□□ 0.74
DDX39A-208ENST00000588692 QSER1Q2KHR3 1735 aa19.68■□□□□ 0.74
DDX39A-208ENST00000588692 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
DDX39A-208ENST00000588692 NKX1-1Q15270 411 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-208ENST00000588692 LRRC4BQ9NT99 713 aa19.67■□□□□ 0.74
DDX39A-208ENST00000588692 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
DDX39A-208ENST00000588692 PHKG2P15735 406 aa19.62■□□□□ 0.73
DDX39A-208ENST00000588692 HMGB2P26583 209 aaKnown RBP19.62■□□□□ 0.73
DDX39A-208ENST00000588692 C5P01031 1676 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 KDRP35968 1356 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 ZNF827Q17R98 1081 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
DDX39A-208ENST00000588692 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 AKT1S1Q96B36 256 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 PDGFDQ9GZP0 370 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-208ENST00000588692 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-208ENST00000588692 TUBGCP6Q96RT7 1819 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 PALLDQ8WX93 1383 aa19.61■□□□□ 0.73
DDX39A-208ENST00000588692 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-208ENST00000588692 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
DDX39A-208ENST00000588692 IL13P35225 146 aa19.6■□□□□ 0.73
DDX39A-208ENST00000588692 MTHFSP49914 203 aa19.6■□□□□ 0.73
DDX39A-208ENST00000588692 AMOTQ4VCS5 1084 aa19.6■□□□□ 0.73
DDX39A-208ENST00000588692 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-208ENST00000588692 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-208ENST00000588692 MTFR1LQ9H019 292 aa19.6■□□□□ 0.73
DDX39A-208ENST00000588692 ZBTB7AO95365 584 aa19.59■□□□□ 0.73
DDX39A-208ENST00000588692 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
DDX39A-208ENST00000588692 KCNQ4P56696 695 aa19.57■□□□□ 0.72
DDX39A-208ENST00000588692 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
DDX39A-208ENST00000588692 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
DDX39A-208ENST00000588692 PIGBQ92521 554 aa19.57■□□□□ 0.72
DDX39A-208ENST00000588692 TMOD3Q9NYL9 352 aa19.57■□□□□ 0.72
DDX39A-208ENST00000588692 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
DDX39A-208ENST00000588692 PTGER2P43116 358 aa19.55■□□□□ 0.72
DDX39A-208ENST00000588692 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-208ENST00000588692 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
DDX39A-208ENST00000588692 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
DDX39A-208ENST00000588692 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
DDX39A-208ENST00000588692 SLC16A10Q8TF71 515 aa19.54■□□□□ 0.72
DDX39A-208ENST00000588692 ATF5Q9Y2D1 282 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-208ENST00000588692 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
DDX39A-208ENST00000588692 COL3A1P02461 1466 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-208ENST00000588692 C4BP0C0L5 1744 aa19.53■□□□□ 0.72
DDX39A-208ENST00000588692 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
DDX39A-208ENST00000588692 KDM6AO15550 1401 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-208ENST00000588692 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
DDX39A-208ENST00000588692 SGIP1Q9BQI5 828 aa19.52■□□□□ 0.72
DDX39A-208ENST00000588692 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
DDX39A-208ENST00000588692 SCN11AQ9UI33 1791 aa19.5■□□□□ 0.71
DDX39A-208ENST00000588692 LOC102724428A0A0B4J2F2 783 aa19.49■□□□□ 0.71
DDX39A-208ENST00000588692 SIK1P57059 783 aa19.49■□□□□ 0.71
DDX39A-208ENST00000588692 CNGB1Q14028 1251 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-208ENST00000588692 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
DDX39A-208ENST00000588692 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
DDX39A-208ENST00000588692 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
DDX39A-208ENST00000588692 ATG3Q9NT62 314 aa19.48■□□□□ 0.71
DDX39A-208ENST00000588692 HMOX1P09601 288 aa19.47■□□□□ 0.71
DDX39A-208ENST00000588692 CABP4P57796 275 aa19.47■□□□□ 0.71
DDX39A-208ENST00000588692 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
DDX39A-208ENST00000588692 POLD1P28340 1107 aa19.46■□□□□ 0.71
DDX39A-208ENST00000588692 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms