RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 NME9Q86XW9 330 aa11.14□□□□□ -0.63
NFIX-211ENST00000588680 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
NFIX-211ENST00000588680 SYTL4Q96C24 671 aaPredicted RBP11.14□□□□□ -0.63
NFIX-211ENST00000588680 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
NFIX-211ENST00000588680 SBNO2Q9Y2G9 1366 aa11.14□□□□□ -0.63
NFIX-211ENST00000588680 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
NFIX-211ENST00000588680 MSH5O43196 834 aa11.13□□□□□ -0.63
NFIX-211ENST00000588680 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
NFIX-211ENST00000588680 MEGF6O75095 1541 aa11.13□□□□□ -0.63
NFIX-211ENST00000588680 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
NFIX-211ENST00000588680 CCNL1Q9UK58 526 aaPredicted RBP11.12□□□□□ -0.63
NFIX-211ENST00000588680 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
NFIX-211ENST00000588680 ITGB4P16144 1822 aa11.12□□□□□ -0.63
NFIX-211ENST00000588680 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
NFIX-211ENST00000588680 COL23A1Q86Y22 540 aaPredicted RBP11.11□□□□□ -0.63
NFIX-211ENST00000588680 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
NFIX-211ENST00000588680 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
NFIX-211ENST00000588680 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
NFIX-211ENST00000588680 USP47Q96K76 1375 aa11.09□□□□□ -0.63
NFIX-211ENST00000588680 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 WWC3Q9ULE0 1092 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 CD2APQ9Y5K6 639 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 WDR90Q96KV7 1748 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 KIAA1551Q9HCM1 1747 aa11.08□□□□□ -0.64
NFIX-211ENST00000588680 IP6K1Q92551 441 aa11.07□□□□□ -0.64
NFIX-211ENST00000588680 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
NFIX-211ENST00000588680 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
NFIX-211ENST00000588680 TMC1Q8TDI8 760 aa11.06□□□□□ -0.64
NFIX-211ENST00000588680 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
NFIX-211ENST00000588680 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
NFIX-211ENST00000588680 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
NFIX-211ENST00000588680 KIF3CO14782 793 aa11.05□□□□□ -0.64
NFIX-211ENST00000588680 BRCA1P38398 1863 aaKnown RBP11.05□□□□□ -0.64
NFIX-211ENST00000588680 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
NFIX-211ENST00000588680 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
NFIX-211ENST00000588680 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
NFIX-211ENST00000588680 HOXC9P31274 260 aa11.04□□□□□ -0.64
NFIX-211ENST00000588680 SLC12A5Q9H2X9 1139 aa11.04□□□□□ -0.64
NFIX-211ENST00000588680 KIF20BQ96Q89 1820 aa11.03□□□□□ -0.64
NFIX-211ENST00000588680 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
NFIX-211ENST00000588680 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
NFIX-211ENST00000588680 APLP1P51693 650 aa11.02□□□□□ -0.65
NFIX-211ENST00000588680 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
NFIX-211ENST00000588680 FLAD1Q8NFF5 587 aa11.02□□□□□ -0.65
NFIX-211ENST00000588680 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
NFIX-211ENST00000588680 ARFGEF1Q9Y6D6 1849 aa11.01□□□□□ -0.65
NFIX-211ENST00000588680 PHF14O94880 888 aa11.01□□□□□ -0.65
NFIX-211ENST00000588680 AMPHP49418 695 aa11.01□□□□□ -0.65
NFIX-211ENST00000588680 AK7Q96M32 723 aa11.01□□□□□ -0.65
NFIX-211ENST00000588680 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
NFIX-211ENST00000588680 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
NFIX-211ENST00000588680 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
NFIX-211ENST00000588680 PCNTO95613 3336 aa11□□□□□ -0.65
NFIX-211ENST00000588680 FBLN1P23142 703 aa11□□□□□ -0.65
NFIX-211ENST00000588680 SMIM5Q71RC9 77 aa11□□□□□ -0.65
NFIX-211ENST00000588680 PCDH11XQ9BZA7 1347 aa11□□□□□ -0.65
NFIX-211ENST00000588680 PCDH11YQ9BZA8 1340 aa11□□□□□ -0.65
NFIX-211ENST00000588680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
NFIX-211ENST00000588680 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 RAPGEF4Q8WZA2 1011 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 COG3Q96JB2 828 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
NFIX-211ENST00000588680 MPRIPQ6WCQ1 1025 aa10.98□□□□□ -0.65
NFIX-211ENST00000588680 DNAJC5GQ8N7S2 189 aa10.98□□□□□ -0.65
NFIX-211ENST00000588680 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
NFIX-211ENST00000588680 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
NFIX-211ENST00000588680 TATP17735 454 aaPredicted RBP10.97□□□□□ -0.65
NFIX-211ENST00000588680 RRS1Q15050 365 aaKnown RBP10.97□□□□□ -0.65
NFIX-211ENST00000588680 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
NFIX-211ENST00000588680 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
NFIX-211ENST00000588680 SBF1O95248 1867 aa10.97□□□□□ -0.65
NFIX-211ENST00000588680 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 C10orf71Q711Q0 1435 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 CYP27B1O15528 508 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 TOMM70O94826 608 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 HMGB2P26583 209 aaKnown RBP10.96□□□□□ -0.65
NFIX-211ENST00000588680 SSFA2P28290 1259 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 NEUROD1Q13562 356 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 SMARCC1Q92922 1105 aaPredicted RBP10.96□□□□□ -0.65
NFIX-211ENST00000588680 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.65
NFIX-211ENST00000588680 CAPN15O75808 1086 aa10.95□□□□□ -0.66
NFIX-211ENST00000588680 HTRA3P83110 453 aa10.95□□□□□ -0.66
NFIX-211ENST00000588680 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
NFIX-211ENST00000588680 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
NFIX-211ENST00000588680 GNPATO15228 680 aa10.94□□□□□ -0.66
NFIX-211ENST00000588680 MMP10P09238 476 aa10.94□□□□□ -0.66
NFIX-211ENST00000588680 PIGBQ92521 554 aa10.94□□□□□ -0.66
NFIX-211ENST00000588680 ZNF831Q5JPB2 1677 aa10.94□□□□□ -0.66
NFIX-211ENST00000588680 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
NFIX-211ENST00000588680 INSRP06213 1382 aa10.93□□□□□ -0.66
NFIX-211ENST00000588680 FLT4P35916 1363 aa10.93□□□□□ -0.66
NFIX-211ENST00000588680 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
NFIX-211ENST00000588680 SIK1P57059 783 aa10.93□□□□□ -0.66
NFIX-211ENST00000588680 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
NFIX-211ENST00000588680 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
NFIX-211ENST00000588680 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms