RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 MEGF6O75095 1541 aa33.84■■■■□ 3.01
SCAMP4-210ENST00000588555 GNAT3A8MTJ3 354 aa33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 AMOTQ4VCS5 1084 aa33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 CRB1P82279 1406 aa33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 GNAI1P63096 354 aa33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 FKBP8Q14318 412 aa33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 PLEKHO1Q53GL0 409 aaPredicted RBP33.83■■■■□ 3.01
SCAMP4-210ENST00000588555 RTF1Q92541 710 aaKnown RBP33.82■■■■□ 3
SCAMP4-210ENST00000588555 CFAP44Q96MT7 982 aa33.82■■■■□ 3
SCAMP4-210ENST00000588555 RRP1P56182 461 aaKnown RBP33.8■■■■□ 3
SCAMP4-210ENST00000588555 RAPGEF4Q8WZA2 1011 aa33.8■■■■□ 3
SCAMP4-210ENST00000588555 BTG4Q9NY30 223 aa33.79■■■■□ 3
SCAMP4-210ENST00000588555 TOM1L2Q6ZVM7 507 aa33.78■■■■□ 3
SCAMP4-210ENST00000588555 LAS1LQ9Y4W2 734 aaKnown RBP33.78■■■■□ 3
SCAMP4-210ENST00000588555 EXOSC9Q06265 439 aaKnown RBP33.77■■■■□ 3
SCAMP4-210ENST00000588555 JCADQ9P266 1359 aa33.77■■■■□ 3
SCAMP4-210ENST00000588555 ZNF530Q6P9A1 599 aaPredicted RBP33.77■■■■□ 3
SCAMP4-210ENST00000588555 LARP1Q6PKG0 1096 aaKnown RBP33.77■■■■□ 3
SCAMP4-210ENST00000588555 CARD10Q9BWT7 1032 aa33.77■■■■□ 3
SCAMP4-210ENST00000588555 MBIPQ9NS73 344 aa33.77■■■■□ 3
SCAMP4-210ENST00000588555 PLCH1Q4KWH8 1693 aa33.76■■■■□ 3
SCAMP4-210ENST00000588555 PKD1L3Q7Z443 1732 aa33.76■■■■□ 3
SCAMP4-210ENST00000588555 TATP17735 454 aaPredicted RBP33.76■■■■□ 3
SCAMP4-210ENST00000588555 IRX6P78412 446 aaPredicted RBP33.76■■■■□ 3
SCAMP4-210ENST00000588555 IL17REQ8NFR9 667 aa33.76■■■■□ 3
SCAMP4-210ENST00000588555 STRN4Q9NRL3 753 aa33.76■■■■□ 3
SCAMP4-210ENST00000588555 AKAP4Q5JQC9 854 aa33.75■■■□□ 2.99
SCAMP4-210ENST00000588555 CT47B1P0C2W7 299 aaPredicted RBP33.75■■■□□ 2.99
SCAMP4-210ENST00000588555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.75■■■□□ 2.99
SCAMP4-210ENST00000588555 CHL1O00533 1208 aa33.74■■■□□ 2.99
SCAMP4-210ENST00000588555 EVA1CP58658 441 aa33.74■■■□□ 2.99
SCAMP4-210ENST00000588555 CEMIPQ8WUJ3 1361 aa33.74■■■□□ 2.99
SCAMP4-210ENST00000588555 PARP4Q9UKK3 1724 aaKnown RBP33.73■■■□□ 2.99
SCAMP4-210ENST00000588555 OVOS2A0A0G2JMS6 1433 aa33.72■■■□□ 2.99
SCAMP4-210ENST00000588555 ADAMTS2O95450 1211 aa33.72■■■□□ 2.99
SCAMP4-210ENST00000588555 ADAMTS7Q9UKP4 1686 aa33.7■■■□□ 2.99
SCAMP4-210ENST00000588555 NRAPQ86VF7 1730 aa33.7■■■□□ 2.99
SCAMP4-210ENST00000588555 NUTM2BA6NNL0 878 aaPredicted RBP33.7■■■□□ 2.98
SCAMP4-210ENST00000588555 NUTM2EB1AL46 878 aaPredicted RBP33.7■■■□□ 2.98
SCAMP4-210ENST00000588555 RARSP54136 660 aaKnown RBP33.7■■■□□ 2.98
SCAMP4-210ENST00000588555 NUTM2AQ8IVF1 878 aaPredicted RBP33.7■■■□□ 2.98
SCAMP4-210ENST00000588555 VIRMAQ69YN4 1812 aaKnown RBP33.68■■■□□ 2.98
SCAMP4-210ENST00000588555 C1orf141Q5JVX7 400 aa33.68■■■□□ 2.98
SCAMP4-210ENST00000588555 BCAR3O75815 825 aa33.67■■■□□ 2.98
SCAMP4-210ENST00000588555 SPG7Q9UQ90 795 aa33.67■■■□□ 2.98
SCAMP4-210ENST00000588555 LGR6Q9HBX8 967 aa33.66■■■□□ 2.98
SCAMP4-210ENST00000588555 NWD2Q9ULI1 1742 aa33.65■■■□□ 2.98
SCAMP4-210ENST00000588555 PLIN1O60240 522 aa33.65■■■□□ 2.98
SCAMP4-210ENST00000588555 SLIT2O94813 1529 aa33.64■■■□□ 2.98
SCAMP4-210ENST00000588555 MPRIPQ6WCQ1 1025 aa33.63■■■□□ 2.97
SCAMP4-210ENST00000588555 IL2RBP14784 551 aa33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 HSPA1LP34931 641 aa33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 RNMTO43148 476 aaKnown RBP33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 PHKG2P15735 406 aa33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 ERICH6BQ5W0A0 696 aa33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 TSPYL6Q8N831 410 aa33.62■■■□□ 2.97
SCAMP4-210ENST00000588555 BABAM1Q9NWV8 329 aa33.61■■■□□ 2.97
SCAMP4-210ENST00000588555 MIS18AQ9NYP9 233 aa33.61■■■□□ 2.97
SCAMP4-210ENST00000588555 SPATA31A6Q5VVP1 1343 aa33.61■■■□□ 2.97
SCAMP4-210ENST00000588555 CYP27B1O15528 508 aa33.6■■■□□ 2.97
SCAMP4-210ENST00000588555 TAF7Q15545 349 aaPredicted RBP33.6■■■□□ 2.97
SCAMP4-210ENST00000588555 C8orf58Q8NAV2 365 aa33.6■■■□□ 2.97
SCAMP4-210ENST00000588555 TSPYL4Q9UJ04 414 aa33.6■■■□□ 2.97
SCAMP4-210ENST00000588555 SHANK3Q9BYB0 1731 aa33.6■■■□□ 2.97
SCAMP4-210ENST00000588555 SCN11AQ9UI33 1791 aa33.59■■■□□ 2.97
SCAMP4-210ENST00000588555 VAMP4O75379 141 aa33.59■■■□□ 2.97
SCAMP4-210ENST00000588555 IFNL2Q8IZJ0 200 aa33.59■■■□□ 2.97
SCAMP4-210ENST00000588555 KDM6AO15550 1401 aaPredicted RBP33.59■■■□□ 2.97
SCAMP4-210ENST00000588555 DISP2A7MBM2 1401 aa33.58■■■□□ 2.97
SCAMP4-210ENST00000588555 SIPA1L3O60292 1781 aaPredicted RBP33.58■■■□□ 2.97
SCAMP4-210ENST00000588555 LRP6O75581 1613 aa33.58■■■□□ 2.97
SCAMP4-210ENST00000588555 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.57■■■□□ 2.97
SCAMP4-210ENST00000588555 ZNF428Q96B54 188 aa33.57■■■□□ 2.97
SCAMP4-210ENST00000588555 USP35Q9P2H5 1018 aa33.57■■■□□ 2.96
SCAMP4-210ENST00000588555 TWISTNBQ3B726 338 aaPredicted RBP33.56■■■□□ 2.96
SCAMP4-210ENST00000588555 ZCRB1Q8TBF4 217 aaKnown RBP33.56■■■□□ 2.96
SCAMP4-210ENST00000588555 SSH1Q8WYL5 1049 aa33.56■■■□□ 2.96
SCAMP4-210ENST00000588555 BCL2L13Q9BXK5 485 aa33.56■■■□□ 2.96
SCAMP4-210ENST00000588555 KDM3BQ7LBC6 1761 aa33.55■■■□□ 2.96
SCAMP4-210ENST00000588555 WNK3Q9BYP7 1800 aa33.55■■■□□ 2.96
SCAMP4-210ENST00000588555 KRT24Q2M2I5 525 aa33.54■■■□□ 2.96
SCAMP4-210ENST00000588555 PCDH11XQ9BZA7 1347 aa33.54■■■□□ 2.96
SCAMP4-210ENST00000588555 PCDH11YQ9BZA8 1340 aa33.54■■■□□ 2.96
SCAMP4-210ENST00000588555 ELL2O00472 640 aaPredicted RBP33.53■■■□□ 2.96
SCAMP4-210ENST00000588555 TEFQ10587 303 aa33.53■■■□□ 2.96
SCAMP4-210ENST00000588555 ALDH1L2Q3SY69 923 aa33.53■■■□□ 2.96
SCAMP4-210ENST00000588555 C20orf194Q5TEA3 1177 aa33.52■■■□□ 2.96
SCAMP4-210ENST00000588555 SMC4Q9NTJ3 1288 aa33.51■■■□□ 2.95
SCAMP4-210ENST00000588555 MRC1P22897 1456 aa33.5■■■□□ 2.95
SCAMP4-210ENST00000588555 DCAF5Q96JK2 942 aa33.5■■■□□ 2.95
SCAMP4-210ENST00000588555 SPATA31A1Q5TZJ5 1347 aa33.5■■■□□ 2.95
SCAMP4-210ENST00000588555 HSP90AB1P08238 724 aaKnown RBP33.49■■■□□ 2.95
SCAMP4-210ENST00000588555 BCL9LQ86UU0 1499 aa33.48■■■□□ 2.95
SCAMP4-210ENST00000588555 BRPF1P55201 1214 aaPredicted RBP33.47■■■□□ 2.95
SCAMP4-210ENST00000588555 C8orf37Q96NL8 207 aa33.47■■■□□ 2.95
SCAMP4-210ENST00000588555 SPATA31A5Q5VU36 1347 aa33.46■■■□□ 2.95
SCAMP4-210ENST00000588555 SPATA31A7Q8IWB4 1347 aa33.46■■■□□ 2.95
SCAMP4-210ENST00000588555 NKX1-1Q15270 411 aaPredicted RBP33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 UNC5CLQ8IV45 518 aa33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 FNBP4Q8N3X1 1017 aaPredicted RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms