RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 APBB1O00213 710 aa7.97□□□□□ -1.13
VPS4B-203ENST00000588323 MEN1O00255 615 aa7.97□□□□□ -1.13
VPS4B-203ENST00000588323 CC2D2BQ6DHV5 1058 aa7.97□□□□□ -1.13
VPS4B-203ENST00000588323 SVOPQ8N4V2 548 aa7.97□□□□□ -1.13
VPS4B-203ENST00000588323 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
VPS4B-203ENST00000588323 RHOQP17081 205 aa7.96□□□□□ -1.14
VPS4B-203ENST00000588323 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
VPS4B-203ENST00000588323 ESF1Q9H501 851 aaKnown RBP7.96□□□□□ -1.14
VPS4B-203ENST00000588323 A0A1W2PRU2 124 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 SOCS7O14512 581 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 KCNMA1Q12791 1236 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 ZNF385CQ66K41 422 aaPredicted RBP7.95□□□□□ -1.14
VPS4B-203ENST00000588323 CYP2U1Q7Z449 544 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 MTMR14Q8NCE2 650 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 NLRP3Q96P20 1036 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 ADAMTS8Q9UP79 889 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
VPS4B-203ENST00000588323 RNF225M0QZC1 329 aaPredicted RBP7.94□□□□□ -1.14
VPS4B-203ENST00000588323 GPC1P35052 558 aa7.94□□□□□ -1.14
VPS4B-203ENST00000588323 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
VPS4B-203ENST00000588323 SCTRP47872 440 aa7.92□□□□□ -1.14
VPS4B-203ENST00000588323 RIPOR1Q6ZS17 1223 aa7.92□□□□□ -1.14
VPS4B-203ENST00000588323 WHAMMQ8TF30 809 aa7.92□□□□□ -1.14
VPS4B-203ENST00000588323 GMCL1Q96IK5 515 aa7.92□□□□□ -1.14
VPS4B-203ENST00000588323 SNRKQ9NRH2 765 aa7.92□□□□□ -1.14
VPS4B-203ENST00000588323 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
VPS4B-203ENST00000588323 GPR37L1O60883 481 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 ADAMTS2O95450 1211 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 CLN3Q13286 438 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 FOXR1Q6PIV2 292 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 TMEM151AQ8N4L1 468 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 ZNF837Q96EG3 531 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-203ENST00000588323 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
VPS4B-203ENST00000588323 SRSF11Q05519 484 aaKnown RBP7.9□□□□□ -1.14
VPS4B-203ENST00000588323 POU4F2Q12837 409 aa7.9□□□□□ -1.14
VPS4B-203ENST00000588323 GAS2L1Q99501 681 aaPredicted RBP7.9□□□□□ -1.14
VPS4B-203ENST00000588323 OSBPL3Q9H4L5 887 aa7.9□□□□□ -1.14
VPS4B-203ENST00000588323 DYRK1BQ9Y463 629 aa7.9□□□□□ -1.14
VPS4B-203ENST00000588323 GDF11O95390 407 aa7.89□□□□□ -1.15
VPS4B-203ENST00000588323 GSK3AP49840 483 aa7.89□□□□□ -1.15
VPS4B-203ENST00000588323 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
VPS4B-203ENST00000588323 RASSF7Q02833 373 aa7.89□□□□□ -1.15
VPS4B-203ENST00000588323 GAS6Q14393 721 aa7.89□□□□□ -1.15
VPS4B-203ENST00000588323 H7C1W4 665 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 TRAK2O60296 914 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 ARHGEF15O94989 841 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 MYCP01106 439 aaPredicted RBP7.88□□□□□ -1.15
VPS4B-203ENST00000588323 MARSP56192 900 aaKnown RBP7.88□□□□□ -1.15
VPS4B-203ENST00000588323 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
VPS4B-203ENST00000588323 KCTD17Q8N5Z5 321 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 GRIP2Q9C0E4 1043 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 PRM3Q9NNZ6 103 aa7.88□□□□□ -1.15
VPS4B-203ENST00000588323 GPR25O00155 361 aa7.87□□□□□ -1.15
VPS4B-203ENST00000588323 DBN1Q16643 649 aa7.87□□□□□ -1.15
VPS4B-203ENST00000588323 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
VPS4B-203ENST00000588323 LYPD4Q6UWN0 246 aa7.87□□□□□ -1.15
VPS4B-203ENST00000588323 MBIPQ9NS73 344 aa7.87□□□□□ -1.15
VPS4B-203ENST00000588323 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 GNRH1P01148 92 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 TAS1R3Q7RTX0 852 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 GTPBP3Q969Y2 492 aaKnown RBP7.86□□□□□ -1.15
VPS4B-203ENST00000588323 TRERF1Q96PN7 1200 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 RAB6BQ9NRW1 208 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 CEP126Q9P2H0 1117 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
VPS4B-203ENST00000588323 WASLO00401 505 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-203ENST00000588323 CELA2BP08218 269 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-203ENST00000588323 EIF4G2P78344 907 aaKnown RBP eCLIP7.85□□□□□ -1.15
VPS4B-203ENST00000588323 SCARF2Q96GP6 870 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-203ENST00000588323 ENAMQ9NRM1 1142 aa7.85□□□□□ -1.15
VPS4B-203ENST00000588323 IRS1P35568 1242 aa7.84□□□□□ -1.15
VPS4B-203ENST00000588323 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
VPS4B-203ENST00000588323 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-203ENST00000588323 ESYT1Q9BSJ8 1104 aa7.84□□□□□ -1.15
VPS4B-203ENST00000588323 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-203ENST00000588323 NUCKS1Q9H1E3 243 aaKnown RBP7.84□□□□□ -1.15
VPS4B-203ENST00000588323 IGF1RP08069 1367 aa7.84□□□□□ -1.16
VPS4B-203ENST00000588323 F11P03951 625 aa7.83□□□□□ -1.16
VPS4B-203ENST00000588323 CENPCQ03188 943 aa7.83□□□□□ -1.16
VPS4B-203ENST00000588323 IL2RAP01589 272 aa7.82□□□□□ -1.16
VPS4B-203ENST00000588323 GTF2E1P29083 439 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-203ENST00000588323 KANK3Q6NY19 840 aa7.82□□□□□ -1.16
VPS4B-203ENST00000588323 ZSCAN10Q96SZ4 725 aaPredicted RBP7.82□□□□□ -1.16
VPS4B-203ENST00000588323 DOLKQ9UPQ8 538 aa7.82□□□□□ -1.16
VPS4B-203ENST00000588323 MX2P20592 715 aa7.81□□□□□ -1.16
VPS4B-203ENST00000588323 SLFNL1Q499Z3 407 aa7.81□□□□□ -1.16
VPS4B-203ENST00000588323 ESCO1Q5FWF5 840 aa7.81□□□□□ -1.16
VPS4B-203ENST00000588323 NSFL1CQ9UNZ2 370 aaKnown RBP7.81□□□□□ -1.16
VPS4B-203ENST00000588323 PHKA2P46019 1235 aa7.8□□□□□ -1.16
VPS4B-203ENST00000588323 USP4Q13107 963 aa7.8□□□□□ -1.16
VPS4B-203ENST00000588323 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
VPS4B-203ENST00000588323 TMEM214Q6NUQ4 689 aaKnown RBP7.8□□□□□ -1.16
VPS4B-203ENST00000588323 XAGE2Q96GT9 111 aa7.8□□□□□ -1.16
VPS4B-203ENST00000588323 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
VPS4B-203ENST00000588323 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms