RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 ACSBG1Q96GR2 724 aa27.64■■■□□ 2.02
LDLRAD4-212ENST00000587905 NCAPD2Q15021 1401 aa27.63■■■□□ 2.01
LDLRAD4-212ENST00000587905 KAT6BQ8WYB5 2073 aa27.63■■■□□ 2.01
LDLRAD4-212ENST00000587905 BCL9O00512 1426 aa27.62■■■□□ 2.01
LDLRAD4-212ENST00000587905 PTF1AQ7RTS3 328 aa27.62■■■□□ 2.01
LDLRAD4-212ENST00000587905 IGSF1Q8N6C5 1336 aa27.61■■■□□ 2.01
LDLRAD4-212ENST00000587905 EZH2Q15910 746 aaKnown RBP27.59■■■□□ 2.01
LDLRAD4-212ENST00000587905 BCL11BQ9C0K0 894 aaPredicted RBP27.59■■■□□ 2.01
LDLRAD4-212ENST00000587905 NHSQ6T4R5 1651 aa27.59■■■□□ 2.01
LDLRAD4-212ENST00000587905 KCNQ2O43526 872 aa27.58■■■□□ 2.01
LDLRAD4-212ENST00000587905 IL13P35225 146 aa27.58■■■□□ 2.01
LDLRAD4-212ENST00000587905 PKD1L3Q7Z443 1732 aa27.58■■■□□ 2.01
LDLRAD4-212ENST00000587905 PCDH11XQ9BZA7 1347 aa27.57■■■□□ 2
LDLRAD4-212ENST00000587905 PCDH11YQ9BZA8 1340 aa27.57■■■□□ 2
LDLRAD4-212ENST00000587905 DOT1LQ8TEK3 1739 aa27.56■■■□□ 2
LDLRAD4-212ENST00000587905 AEBP1Q8IUX7 1158 aa27.55■■■□□ 2
LDLRAD4-212ENST00000587905 SPG7Q9UQ90 795 aa27.55■■■□□ 2
LDLRAD4-212ENST00000587905 DIAPH1O60610 1272 aaKnown RBP27.54■■■□□ 2
LDLRAD4-212ENST00000587905 PPP2R1AP30153 589 aa27.54■■■□□ 2
LDLRAD4-212ENST00000587905 SULT6B1Q6IMI4 303 aa27.54■■■□□ 2
LDLRAD4-212ENST00000587905 SYTL4Q96C24 671 aaPredicted RBP27.54■■■□□ 2
LDLRAD4-212ENST00000587905 CAMKK2Q96RR4 588 aa27.54■■■□□ 2
LDLRAD4-212ENST00000587905 BTAF1O14981 1849 aa27.51■■□□□ 1.99
LDLRAD4-212ENST00000587905 CYP27B1O15528 508 aa27.51■■□□□ 1.99
LDLRAD4-212ENST00000587905 COL3A1P02461 1466 aaPredicted RBP27.51■■□□□ 1.99
LDLRAD4-212ENST00000587905 CFAP53Q96M91 514 aa27.5■■□□□ 1.99
LDLRAD4-212ENST00000587905 PARD3Q8TEW0 1356 aa27.49■■□□□ 1.99
LDLRAD4-212ENST00000587905 HMOX1P09601 288 aa27.49■■□□□ 1.99
LDLRAD4-212ENST00000587905 RREB1Q92766 1687 aa27.49■■□□□ 1.99
LDLRAD4-212ENST00000587905 U2SURPO15042 1029 aaKnown RBP27.48■■□□□ 1.99
LDLRAD4-212ENST00000587905 PRIM1P49642 420 aaKnown RBP27.48■■□□□ 1.99
LDLRAD4-212ENST00000587905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
LDLRAD4-212ENST00000587905 RGPD3A6NKT7 1758 aaPredicted RBP27.47■■□□□ 1.99
LDLRAD4-212ENST00000587905 RGPD4Q7Z3J3 1758 aa27.47■■□□□ 1.99
LDLRAD4-212ENST00000587905 PLSCR1O15162 318 aa27.46■■□□□ 1.99
LDLRAD4-212ENST00000587905 NUP188Q5SRE5 1749 aa27.46■■□□□ 1.99
LDLRAD4-212ENST00000587905 KDRP35968 1356 aa27.46■■□□□ 1.99
LDLRAD4-212ENST00000587905 PLEKHO1Q53GL0 409 aaPredicted RBP27.45■■□□□ 1.98
LDLRAD4-212ENST00000587905 TOGARAM1Q9Y4F4 1720 aa27.44■■□□□ 1.98
LDLRAD4-212ENST00000587905 PHKG2P15735 406 aa27.43■■□□□ 1.98
LDLRAD4-212ENST00000587905 IFNL2Q8IZJ0 200 aa27.43■■□□□ 1.98
LDLRAD4-212ENST00000587905 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
LDLRAD4-212ENST00000587905 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
LDLRAD4-212ENST00000587905 PLEKHG2Q9H7P9 1386 aa27.41■■□□□ 1.98
LDLRAD4-212ENST00000587905 AMOTQ4VCS5 1084 aa27.41■■□□□ 1.98
LDLRAD4-212ENST00000587905 ITGB4P16144 1822 aa27.4■■□□□ 1.98
LDLRAD4-212ENST00000587905 PSDA5PKW4 1024 aaPredicted RBP27.4■■□□□ 1.98
LDLRAD4-212ENST00000587905 TXNRD1Q16881 649 aa27.4■■□□□ 1.98
LDLRAD4-212ENST00000587905 MPRIPQ6WCQ1 1025 aa27.39■■□□□ 1.98
LDLRAD4-212ENST00000587905 NKX1-1Q15270 411 aaPredicted RBP27.38■■□□□ 1.97
LDLRAD4-212ENST00000587905 RALBP1Q15311 655 aa27.38■■□□□ 1.97
LDLRAD4-212ENST00000587905 PROM2Q8N271 834 aa27.38■■□□□ 1.97
LDLRAD4-212ENST00000587905 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
LDLRAD4-212ENST00000587905 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
LDLRAD4-212ENST00000587905 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
LDLRAD4-212ENST00000587905 NBPF14Q5TI25 921 aa27.36■■□□□ 1.97
LDLRAD4-212ENST00000587905 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-212ENST00000587905 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
LDLRAD4-212ENST00000587905 HSP90AB1P08238 724 aaKnown RBP27.33■■□□□ 1.97
LDLRAD4-212ENST00000587905 TMOD3Q9NYL9 352 aa27.32■■□□□ 1.96
LDLRAD4-212ENST00000587905 DCAF5Q96JK2 942 aa27.31■■□□□ 1.96
LDLRAD4-212ENST00000587905 MTHFSDQ2M296 383 aaKnown RBP27.3■■□□□ 1.96
LDLRAD4-212ENST00000587905 PIGBQ92521 554 aa27.3■■□□□ 1.96
LDLRAD4-212ENST00000587905 KDM6AO15550 1401 aaPredicted RBP27.3■■□□□ 1.96
LDLRAD4-212ENST00000587905 LY75O60449 1722 aa27.3■■□□□ 1.96
LDLRAD4-212ENST00000587905 PRKAR2BP31323 418 aa27.29■■□□□ 1.96
LDLRAD4-212ENST00000587905 KCNQ4P56696 695 aa27.29■■□□□ 1.96
LDLRAD4-212ENST00000587905 ANO8Q9HCE9 1232 aaPredicted RBP27.29■■□□□ 1.96
LDLRAD4-212ENST00000587905 MYBBP1AQ9BQG0 1328 aaKnown RBP27.29■■□□□ 1.96
LDLRAD4-212ENST00000587905 AKAP4Q5JQC9 854 aa27.27■■□□□ 1.96
LDLRAD4-212ENST00000587905 RSPH6AQ9H0K4 717 aa27.27■■□□□ 1.96
LDLRAD4-212ENST00000587905 LRRC4BQ9NT99 713 aa27.27■■□□□ 1.96
LDLRAD4-212ENST00000587905 PALLDQ8WX93 1383 aa27.26■■□□□ 1.95
LDLRAD4-212ENST00000587905 STK32BQ9NY57 414 aa27.26■■□□□ 1.95
LDLRAD4-212ENST00000587905 CCNL1Q9UK58 526 aaPredicted RBP27.26■■□□□ 1.95
LDLRAD4-212ENST00000587905 SCN11AQ9UI33 1791 aa27.25■■□□□ 1.95
LDLRAD4-212ENST00000587905 CABP4P57796 275 aa27.25■■□□□ 1.95
LDLRAD4-212ENST00000587905 SLC27A3Q5K4L6 730 aa27.25■■□□□ 1.95
LDLRAD4-212ENST00000587905 PRKRIP1Q9H875 184 aaPredicted RBP27.25■■□□□ 1.95
LDLRAD4-212ENST00000587905 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
LDLRAD4-212ENST00000587905 ERVV-2B6SEH9 535 aa27.24■■□□□ 1.95
LDLRAD4-212ENST00000587905 SMARCC1Q92922 1105 aaPredicted RBP27.23■■□□□ 1.95
LDLRAD4-212ENST00000587905 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
LDLRAD4-212ENST00000587905 GAS2L2Q8NHY3 880 aa27.22■■□□□ 1.95
LDLRAD4-212ENST00000587905 PHACTR3Q96KR7 559 aa27.22■■□□□ 1.95
LDLRAD4-212ENST00000587905 ASAP1Q9ULH1 1129 aa27.22■■□□□ 1.95
LDLRAD4-212ENST00000587905 FCHSD2O94868 740 aa27.21■■□□□ 1.95
LDLRAD4-212ENST00000587905 LGR6Q9HBX8 967 aa27.21■■□□□ 1.95
LDLRAD4-212ENST00000587905 SLC15A2Q16348 729 aa27.2■■□□□ 1.94
LDLRAD4-212ENST00000587905 NFATC2IPQ8NCF5 419 aa27.19■■□□□ 1.94
LDLRAD4-212ENST00000587905 RNMTO43148 476 aaKnown RBP27.18■■□□□ 1.94
LDLRAD4-212ENST00000587905 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
LDLRAD4-212ENST00000587905 ATG3Q9NT62 314 aa27.18■■□□□ 1.94
LDLRAD4-212ENST00000587905 MAP3K5Q99683 1374 aa27.18■■□□□ 1.94
LDLRAD4-212ENST00000587905 C5P01031 1676 aa27.17■■□□□ 1.94
LDLRAD4-212ENST00000587905 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
LDLRAD4-212ENST00000587905 NEFMP07197 916 aa27.16■■□□□ 1.94
LDLRAD4-212ENST00000587905 TAF1LQ8IZX4 1826 aa27.14■■□□□ 1.94
LDLRAD4-212ENST00000587905 LOC102724428A0A0B4J2F2 783 aa27.14■■□□□ 1.94
LDLRAD4-212ENST00000587905 SIK1P57059 783 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 1148.3 ms