RNA–Protein interactions for RNA: ENST00000587843.5

ROGDI-209, Transcript of rogdi homolog, humanhuman

TSL 2

Gene ROGDI, Length 1,362 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-209ENST00000587843 COL3A1P02461 1466 aaPredicted RBP33.11■■■□□ 2.89
ROGDI-209ENST00000587843 TNS1Q9HBL0 1735 aaKnown RBP33.11■■■□□ 2.89
ROGDI-209ENST00000587843 PKD1L3Q7Z443 1732 aa33.1■■■□□ 2.89
ROGDI-209ENST00000587843 SBF2Q86WG5 1849 aa33.1■■■□□ 2.89
ROGDI-209ENST00000587843 DIAPH1O60610 1272 aaKnown RBP33.09■■■□□ 2.89
ROGDI-209ENST00000587843 CFAP53Q96M91 514 aa33.08■■■□□ 2.89
ROGDI-209ENST00000587843 KDRP35968 1356 aa33.07■■■□□ 2.88
ROGDI-209ENST00000587843 RALBP1Q15311 655 aa33.07■■■□□ 2.88
ROGDI-209ENST00000587843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.07■■■□□ 2.88
ROGDI-209ENST00000587843 TRIM37O94972 964 aa33.06■■■□□ 2.88
ROGDI-209ENST00000587843 PCDH11XQ9BZA7 1347 aa33.05■■■□□ 2.88
ROGDI-209ENST00000587843 PCDH11YQ9BZA8 1340 aa33.05■■■□□ 2.88
ROGDI-209ENST00000587843 DDX54Q8TDD1 881 aaKnown RBP33.04■■■□□ 2.88
ROGDI-209ENST00000587843 BAG6P46379 1132 aa33.03■■■□□ 2.88
ROGDI-209ENST00000587843 SPG7Q9UQ90 795 aa33.03■■■□□ 2.88
ROGDI-209ENST00000587843 NHSQ6T4R5 1651 aa33.02■■■□□ 2.88
ROGDI-209ENST00000587843 BCL11BQ9C0K0 894 aaPredicted RBP33■■■□□ 2.87
ROGDI-209ENST00000587843 SULT6B1Q6IMI4 303 aa32.99■■■□□ 2.87
ROGDI-209ENST00000587843 AEBP1Q8IUX7 1158 aa32.96■■■□□ 2.87
ROGDI-209ENST00000587843 DEFB132Q7Z7B7 95 aa32.96■■■□□ 2.87
ROGDI-209ENST00000587843 RGPD3A6NKT7 1758 aaPredicted RBP32.95■■■□□ 2.87
ROGDI-209ENST00000587843 RGPD4Q7Z3J3 1758 aa32.95■■■□□ 2.87
ROGDI-209ENST00000587843 APBA3O96018 575 aa32.95■■■□□ 2.86
ROGDI-209ENST00000587843 AMOTQ4VCS5 1084 aa32.95■■■□□ 2.86
ROGDI-209ENST00000587843 CYP27B1O15528 508 aa32.94■■■□□ 2.86
ROGDI-209ENST00000587843 NUDCQ9Y266 331 aa32.94■■■□□ 2.86
ROGDI-209ENST00000587843 PLEKHO1Q53GL0 409 aaPredicted RBP32.93■■■□□ 2.86
ROGDI-209ENST00000587843 DOT1LQ8TEK3 1739 aa32.93■■■□□ 2.86
ROGDI-209ENST00000587843 MYBBP1AQ9BQG0 1328 aaKnown RBP32.92■■■□□ 2.86
ROGDI-209ENST00000587843 NKX1-1Q15270 411 aaPredicted RBP32.91■■■□□ 2.86
ROGDI-209ENST00000587843 IFNL2Q8IZJ0 200 aa32.9■■■□□ 2.86
ROGDI-209ENST00000587843 U2SURPO15042 1029 aaKnown RBP32.89■■■□□ 2.86
ROGDI-209ENST00000587843 PLSCR1O15162 318 aa32.89■■■□□ 2.86
ROGDI-209ENST00000587843 ACSBG1Q96GR2 724 aa32.89■■■□□ 2.86
ROGDI-209ENST00000587843 PRKRIP1Q9H875 184 aaPredicted RBP32.89■■■□□ 2.86
ROGDI-209ENST00000587843 HMOX1P09601 288 aa32.88■■■□□ 2.85
ROGDI-209ENST00000587843 EN1Q05925 392 aaPredicted RBP32.88■■■□□ 2.85
ROGDI-209ENST00000587843 KCNQ2O43526 872 aa32.87■■■□□ 2.85
ROGDI-209ENST00000587843 PHKG2P15735 406 aa32.87■■■□□ 2.85
ROGDI-209ENST00000587843 CAMKK2Q96RR4 588 aa32.87■■■□□ 2.85
ROGDI-209ENST00000587843 PTF1AQ7RTS3 328 aa32.85■■■□□ 2.85
ROGDI-209ENST00000587843 BTAF1O14981 1849 aa32.85■■■□□ 2.85
ROGDI-209ENST00000587843 RREB1Q92766 1687 aa32.84■■■□□ 2.85
ROGDI-209ENST00000587843 HSP90AB1P08238 724 aaKnown RBP32.83■■■□□ 2.85
ROGDI-209ENST00000587843 TOGARAM1Q9Y4F4 1720 aa32.83■■■□□ 2.85
ROGDI-209ENST00000587843 ZNF530Q6P9A1 599 aaPredicted RBP32.83■■■□□ 2.85
ROGDI-209ENST00000587843 PRIM1P49642 420 aaKnown RBP32.82■■■□□ 2.84
ROGDI-209ENST00000587843 EZH2Q15910 746 aaKnown RBP32.82■■■□□ 2.84
ROGDI-209ENST00000587843 KAT6BQ8WYB5 2073 aa32.81■■■□□ 2.84
ROGDI-209ENST00000587843 SYTL4Q96C24 671 aaPredicted RBP32.8■■■□□ 2.84
ROGDI-209ENST00000587843 U2AF1L5P0DN76 240 aaPredicted RBP32.79■■■□□ 2.84
ROGDI-209ENST00000587843 U2AF1Q01081 240 aaKnown RBP eCLIP32.79■■■□□ 2.84
ROGDI-209ENST00000587843 C1orf141Q5JVX7 400 aa32.79■■■□□ 2.84
ROGDI-209ENST00000587843 RSPH6AQ9H0K4 717 aa32.79■■■□□ 2.84
ROGDI-209ENST00000587843 FCHSD2O94868 740 aa32.78■■■□□ 2.84
ROGDI-209ENST00000587843 DCAF5Q96JK2 942 aa32.78■■■□□ 2.84
ROGDI-209ENST00000587843 ITGB4P16144 1822 aa32.76■■■□□ 2.83
ROGDI-209ENST00000587843 NUP188Q5SRE5 1749 aa32.75■■■□□ 2.83
ROGDI-209ENST00000587843 AKAP4Q5JQC9 854 aa32.75■■■□□ 2.83
ROGDI-209ENST00000587843 ERVV-2B6SEH9 535 aa32.72■■■□□ 2.83
ROGDI-209ENST00000587843 PRKAR2BP31323 418 aa32.72■■■□□ 2.83
ROGDI-209ENST00000587843 MTHFSDQ2M296 383 aaKnown RBP32.72■■■□□ 2.83
ROGDI-209ENST00000587843 GAS2L2Q8NHY3 880 aa32.72■■■□□ 2.83
ROGDI-209ENST00000587843 KDM6AO15550 1401 aaPredicted RBP32.72■■■□□ 2.83
ROGDI-209ENST00000587843 TXNRD1Q16881 649 aa32.7■■■□□ 2.82
ROGDI-209ENST00000587843 MPRIPQ6WCQ1 1025 aa32.7■■■□□ 2.82
ROGDI-209ENST00000587843 TMOD3Q9NYL9 352 aa32.69■■■□□ 2.82
ROGDI-209ENST00000587843 LY75O60449 1722 aa32.69■■■□□ 2.82
ROGDI-209ENST00000587843 SCN11AQ9UI33 1791 aa32.68■■■□□ 2.82
ROGDI-209ENST00000587843 ANP32CO43423 234 aa32.68■■■□□ 2.82
ROGDI-209ENST00000587843 PROM2Q8N271 834 aa32.68■■■□□ 2.82
ROGDI-209ENST00000587843 PNNQ9H307 717 aaKnown RBP32.68■■■□□ 2.82
ROGDI-209ENST00000587843 ADAMTS7Q9UKP4 1686 aa32.67■■■□□ 2.82
ROGDI-209ENST00000587843 SLC27A3Q5K4L6 730 aa32.65■■■□□ 2.82
ROGDI-209ENST00000587843 PIGBQ92521 554 aa32.65■■■□□ 2.82
ROGDI-209ENST00000587843 SMARCC1Q92922 1105 aaPredicted RBP32.64■■■□□ 2.82
ROGDI-209ENST00000587843 PHACTR3Q96KR7 559 aa32.64■■■□□ 2.82
ROGDI-209ENST00000587843 NEFMP07197 916 aa32.63■■■□□ 2.81
ROGDI-209ENST00000587843 NBPF14Q5TI25 921 aa32.63■■■□□ 2.81
ROGDI-209ENST00000587843 MAP3K5Q99683 1374 aa32.63■■■□□ 2.81
ROGDI-209ENST00000587843 MRC1P22897 1456 aa32.62■■■□□ 2.81
ROGDI-209ENST00000587843 VIRMAQ69YN4 1812 aaKnown RBP32.61■■■□□ 2.81
ROGDI-209ENST00000587843 PALLDQ8WX93 1383 aa32.6■■■□□ 2.81
ROGDI-209ENST00000587843 GNAT3A8MTJ3 354 aa32.6■■■□□ 2.81
ROGDI-209ENST00000587843 CABP4P57796 275 aa32.6■■■□□ 2.81
ROGDI-209ENST00000587843 PAPPAQ13219 1627 aa32.59■■■□□ 2.81
ROGDI-209ENST00000587843 HMGB2P26583 209 aaKnown RBP32.59■■■□□ 2.81
ROGDI-209ENST00000587843 PLEKHF1Q96S99 279 aa32.59■■■□□ 2.81
ROGDI-209ENST00000587843 RNMTO43148 476 aaKnown RBP32.58■■■□□ 2.81
ROGDI-209ENST00000587843 WDR43Q15061 677 aaKnown RBP eCLIP32.58■■■□□ 2.81
ROGDI-209ENST00000587843 SLC52A2Q9HAB3 445 aa32.56■■■□□ 2.8
ROGDI-209ENST00000587843 LGR6Q9HBX8 967 aa32.56■■■□□ 2.8
ROGDI-209ENST00000587843 LRRC4BQ9NT99 713 aa32.55■■■□□ 2.8
ROGDI-209ENST00000587843 MAPK8IP3Q9UPT6 1336 aa32.54■■■□□ 2.8
ROGDI-209ENST00000587843 NFATC2IPQ8NCF5 419 aa32.54■■■□□ 2.8
ROGDI-209ENST00000587843 CCNL1Q9UK58 526 aaPredicted RBP32.54■■■□□ 2.8
ROGDI-209ENST00000587843 ATG3Q9NT62 314 aa32.53■■■□□ 2.8
ROGDI-209ENST00000587843 ASAP1Q9ULH1 1129 aa32.53■■■□□ 2.8
ROGDI-209ENST00000587843 HTATSF1O43719 755 aaKnown RBP32.52■■■□□ 2.8
ROGDI-209ENST00000587843 CEMIPQ8WUJ3 1361 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms