RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
HDAC5-206ENST00000587776 MEGF6O75095 1541 aa21.24■□□□□ 0.99
HDAC5-206ENST00000587776 PRIM1P49642 420 aaKnown RBP21.24■□□□□ 0.99
HDAC5-206ENST00000587776 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
HDAC5-206ENST00000587776 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
HDAC5-206ENST00000587776 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
HDAC5-206ENST00000587776 COL24A1Q17RW2 1714 aa21.23■□□□□ 0.99
HDAC5-206ENST00000587776 POLD1P28340 1107 aa21.22■□□□□ 0.99
HDAC5-206ENST00000587776 KCNQ4P56696 695 aa21.22■□□□□ 0.99
HDAC5-206ENST00000587776 TMF1P82094 1093 aa21.22■□□□□ 0.99
HDAC5-206ENST00000587776 RRS1Q15050 365 aaKnown RBP21.22■□□□□ 0.99
HDAC5-206ENST00000587776 MAP3K5Q99683 1374 aa21.22■□□□□ 0.99
HDAC5-206ENST00000587776 SLC16A10Q8TF71 515 aa21.21■□□□□ 0.99
HDAC5-206ENST00000587776 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
HDAC5-206ENST00000587776 ZNF784Q8NCA9 323 aaPredicted RBP21.2■□□□□ 0.98
HDAC5-206ENST00000587776 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
HDAC5-206ENST00000587776 USP47Q96K76 1375 aa21.2■□□□□ 0.98
HDAC5-206ENST00000587776 GPR162Q16538 588 aa21.19■□□□□ 0.98
HDAC5-206ENST00000587776 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
HDAC5-206ENST00000587776 RAPGEF4Q8WZA2 1011 aa21.19■□□□□ 0.98
HDAC5-206ENST00000587776 NSD2O96028 1365 aa21.19■□□□□ 0.98
HDAC5-206ENST00000587776 C5P01031 1676 aa21.18■□□□□ 0.98
HDAC5-206ENST00000587776 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
HDAC5-206ENST00000587776 FYB1O15117 783 aa21.17■□□□□ 0.98
HDAC5-206ENST00000587776 MSH5O43196 834 aa21.17■□□□□ 0.98
HDAC5-206ENST00000587776 NBPF6Q5VWK0 638 aa21.17■□□□□ 0.98
HDAC5-206ENST00000587776 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
HDAC5-206ENST00000587776 NBPF4Q96M43 638 aa21.17■□□□□ 0.98
HDAC5-206ENST00000587776 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
HDAC5-206ENST00000587776 TATP17735 454 aaPredicted RBP21.16■□□□□ 0.98
HDAC5-206ENST00000587776 TAF1LQ8IZX4 1826 aa21.15■□□□□ 0.98
HDAC5-206ENST00000587776 ITGB4P16144 1822 aa21.15■□□□□ 0.98
HDAC5-206ENST00000587776 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
HDAC5-206ENST00000587776 FLT4P35916 1363 aa21.13■□□□□ 0.97
HDAC5-206ENST00000587776 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
HDAC5-206ENST00000587776 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
HDAC5-206ENST00000587776 INSRP06213 1382 aa21.12■□□□□ 0.97
HDAC5-206ENST00000587776 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
HDAC5-206ENST00000587776 PKD1L3Q7Z443 1732 aa21.11■□□□□ 0.97
HDAC5-206ENST00000587776 TOGARAM1Q9Y4F4 1720 aa21.11■□□□□ 0.97
HDAC5-206ENST00000587776 UTRNP46939 3433 aa21.1■□□□□ 0.97
HDAC5-206ENST00000587776 MAP2P11137 1827 aaKnown RBP21.1■□□□□ 0.97
HDAC5-206ENST00000587776 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
HDAC5-206ENST00000587776 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
HDAC5-206ENST00000587776 NSD3Q9BZ95 1437 aa21.08■□□□□ 0.97
HDAC5-206ENST00000587776 ANKRD26Q9UPS8 1709 aa21.08■□□□□ 0.97
HDAC5-206ENST00000587776 MSL1Q68DK7 614 aa21.07■□□□□ 0.96
HDAC5-206ENST00000587776 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
HDAC5-206ENST00000587776 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
HDAC5-206ENST00000587776 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
HDAC5-206ENST00000587776 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
HDAC5-206ENST00000587776 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
HDAC5-206ENST00000587776 C4BP0C0L5 1744 aa21.06■□□□□ 0.96
HDAC5-206ENST00000587776 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
HDAC5-206ENST00000587776 TRIM26Q12899 539 aaPredicted RBP21.04■□□□□ 0.96
HDAC5-206ENST00000587776 UBR3Q6ZT12 1888 aa21.03■□□□□ 0.96
HDAC5-206ENST00000587776 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
HDAC5-206ENST00000587776 CYP27B1O15528 508 aa21.02■□□□□ 0.96
HDAC5-206ENST00000587776 FLAD1Q8NFF5 587 aa21.02■□□□□ 0.96
HDAC5-206ENST00000587776 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
HDAC5-206ENST00000587776 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
HDAC5-206ENST00000587776 SMARCC1Q92922 1105 aaPredicted RBP21.01■□□□□ 0.95
HDAC5-206ENST00000587776 AK7Q96M32 723 aa21.01■□□□□ 0.95
HDAC5-206ENST00000587776 SPG7Q9UQ90 795 aa21■□□□□ 0.95
HDAC5-206ENST00000587776 GRIN3BO60391 1043 aa20.99■□□□□ 0.95
HDAC5-206ENST00000587776 GIGYF1O75420 1035 aaPredicted RBP20.99■□□□□ 0.95
HDAC5-206ENST00000587776 POLR3GLQ9BT43 218 aa20.98■□□□□ 0.95
HDAC5-206ENST00000587776 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
HDAC5-206ENST00000587776 PHF14O94880 888 aa20.97■□□□□ 0.95
HDAC5-206ENST00000587776 YBX3P16989 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
HDAC5-206ENST00000587776 PIGBQ92521 554 aa20.95■□□□□ 0.94
HDAC5-206ENST00000587776 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
HDAC5-206ENST00000587776 TMOD3Q9NYL9 352 aa20.94■□□□□ 0.94
HDAC5-206ENST00000587776 CD2APQ9Y5K6 639 aa20.94■□□□□ 0.94
HDAC5-206ENST00000587776 EYA1Q99502 592 aa20.93■□□□□ 0.94
HDAC5-206ENST00000587776 GOLGB1Q14789 3259 aaKnown RBP20.93■□□□□ 0.94
HDAC5-206ENST00000587776 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
HDAC5-206ENST00000587776 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
HDAC5-206ENST00000587776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.91■□□□□ 0.94
HDAC5-206ENST00000587776 LOC102724428A0A0B4J2F2 783 aa20.91■□□□□ 0.94
HDAC5-206ENST00000587776 SIK1P57059 783 aa20.91■□□□□ 0.94
HDAC5-206ENST00000587776 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
HDAC5-206ENST00000587776 SMIM5Q71RC9 77 aa20.9■□□□□ 0.94
HDAC5-206ENST00000587776 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
HDAC5-206ENST00000587776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
HDAC5-206ENST00000587776 SSFA2P28290 1259 aa20.89■□□□□ 0.93
HDAC5-206ENST00000587776 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
HDAC5-206ENST00000587776 LINC00116Q8NCU8 138 aa20.89■□□□□ 0.93
HDAC5-206ENST00000587776 POLKQ9UBT6 870 aa20.89■□□□□ 0.93
HDAC5-206ENST00000587776 PHKG2P15735 406 aa20.88■□□□□ 0.93
HDAC5-206ENST00000587776 ASAP1Q9ULH1 1129 aa20.88■□□□□ 0.93
HDAC5-206ENST00000587776 ATP10DQ9P241 1426 aa20.87■□□□□ 0.93
HDAC5-206ENST00000587776 GNPATO15228 680 aa20.87■□□□□ 0.93
HDAC5-206ENST00000587776 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
HDAC5-206ENST00000587776 EIF4A2Q14240 407 aaKnown RBP20.87■□□□□ 0.93
HDAC5-206ENST00000587776 IGSF1Q8N6C5 1336 aa20.86■□□□□ 0.93
HDAC5-206ENST00000587776 WWC3Q9ULE0 1092 aa20.86■□□□□ 0.93
HDAC5-206ENST00000587776 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
HDAC5-206ENST00000587776 ITPK1Q13572 414 aa20.84■□□□□ 0.93
HDAC5-206ENST00000587776 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms