RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 ZCRB1Q8TBF4 217 aaKnown RBP32.04■■■□□ 2.72
CHAF1A-205ENST00000587580 RGPD3A6NKT7 1758 aaPredicted RBP32.04■■■□□ 2.72
CHAF1A-205ENST00000587580 RGPD4Q7Z3J3 1758 aa32.04■■■□□ 2.72
CHAF1A-205ENST00000587580 ACSBG1Q96GR2 724 aa32.03■■■□□ 2.72
CHAF1A-205ENST00000587580 EIF4A2Q14240 407 aaKnown RBP32.02■■■□□ 2.72
CHAF1A-205ENST00000587580 CC2D1BQ5T0F9 858 aaKnown RBP32.02■■■□□ 2.72
CHAF1A-205ENST00000587580 NUP188Q5SRE5 1749 aa32.01■■■□□ 2.72
CHAF1A-205ENST00000587580 EYA1Q99502 592 aa32.01■■■□□ 2.71
CHAF1A-205ENST00000587580 KCNQ2O43526 872 aa31.99■■■□□ 2.71
CHAF1A-205ENST00000587580 KAT6BQ8WYB5 2073 aa31.98■■■□□ 2.71
CHAF1A-205ENST00000587580 NPC1L1Q9UHC9 1359 aa31.97■■■□□ 2.71
CHAF1A-205ENST00000587580 PLSCR1O15162 318 aa31.97■■■□□ 2.71
CHAF1A-205ENST00000587580 PKD1L3Q7Z443 1732 aa31.97■■■□□ 2.71
CHAF1A-205ENST00000587580 DOT1LQ8TEK3 1739 aa31.97■■■□□ 2.71
CHAF1A-205ENST00000587580 CNGB1Q14028 1251 aaPredicted RBP31.95■■■□□ 2.71
CHAF1A-205ENST00000587580 BTAF1O14981 1849 aa31.95■■■□□ 2.7
CHAF1A-205ENST00000587580 PCDH11XQ9BZA7 1347 aa31.94■■■□□ 2.7
CHAF1A-205ENST00000587580 PCDH11YQ9BZA8 1340 aa31.94■■■□□ 2.7
CHAF1A-205ENST00000587580 PSDA5PKW4 1024 aaPredicted RBP31.92■■■□□ 2.7
CHAF1A-205ENST00000587580 IGSF1Q8N6C5 1336 aa31.92■■■□□ 2.7
CHAF1A-205ENST00000587580 MTHFSP49914 203 aa31.88■■■□□ 2.69
CHAF1A-205ENST00000587580 R3HDM1Q15032 1099 aaKnown RBP31.88■■■□□ 2.69
CHAF1A-205ENST00000587580 SYTL4Q96C24 671 aaPredicted RBP31.87■■■□□ 2.69
CHAF1A-205ENST00000587580 SPG7Q9UQ90 795 aa31.86■■■□□ 2.69
CHAF1A-205ENST00000587580 CYP27B1O15528 508 aa31.85■■■□□ 2.69
CHAF1A-205ENST00000587580 NBPF14Q5TI25 921 aa31.85■■■□□ 2.69
CHAF1A-205ENST00000587580 PRIM1P49642 420 aaKnown RBP31.84■■■□□ 2.69
CHAF1A-205ENST00000587580 TXNRD1Q16881 649 aa31.84■■■□□ 2.69
CHAF1A-205ENST00000587580 PROM2Q8N271 834 aa31.84■■■□□ 2.69
CHAF1A-205ENST00000587580 PLEKHG2Q9H7P9 1386 aa31.82■■■□□ 2.69
CHAF1A-205ENST00000587580 IL13P35225 146 aa31.82■■■□□ 2.68
CHAF1A-205ENST00000587580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.82■■■□□ 2.68
CHAF1A-205ENST00000587580 TOGARAM1Q9Y4F4 1720 aa31.8■■■□□ 2.68
CHAF1A-205ENST00000587580 AEBP1Q8IUX7 1158 aa31.79■■■□□ 2.68
CHAF1A-205ENST00000587580 ANO8Q9HCE9 1232 aaPredicted RBP31.77■■■□□ 2.68
CHAF1A-205ENST00000587580 SULT6B1Q6IMI4 303 aa31.76■■■□□ 2.67
CHAF1A-205ENST00000587580 KDRP35968 1356 aa31.75■■■□□ 2.67
CHAF1A-205ENST00000587580 COL3A1P02461 1466 aaPredicted RBP31.75■■■□□ 2.67
CHAF1A-205ENST00000587580 ITGB4P16144 1822 aa31.75■■■□□ 2.67
CHAF1A-205ENST00000587580 DIAPH1O60610 1272 aaKnown RBP31.74■■■□□ 2.67
CHAF1A-205ENST00000587580 IFNL2Q8IZJ0 200 aa31.74■■■□□ 2.67
CHAF1A-205ENST00000587580 PHKG2P15735 406 aa31.73■■■□□ 2.67
CHAF1A-205ENST00000587580 NKX1-1Q15270 411 aaPredicted RBP31.73■■■□□ 2.67
CHAF1A-205ENST00000587580 LY75O60449 1722 aa31.72■■■□□ 2.67
CHAF1A-205ENST00000587580 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
CHAF1A-205ENST00000587580 PLEKHO1Q53GL0 409 aaPredicted RBP31.72■■■□□ 2.67
CHAF1A-205ENST00000587580 LRP5O75197 1615 aa31.71■■■□□ 2.67
CHAF1A-205ENST00000587580 PAPPAQ13219 1627 aa31.71■■■□□ 2.67
CHAF1A-205ENST00000587580 AMOTQ4VCS5 1084 aa31.69■■■□□ 2.66
CHAF1A-205ENST00000587580 MPRIPQ6WCQ1 1025 aa31.69■■■□□ 2.66
CHAF1A-205ENST00000587580 STK32BQ9NY57 414 aa31.69■■■□□ 2.66
CHAF1A-205ENST00000587580 ZNF530Q6P9A1 599 aaPredicted RBP31.68■■■□□ 2.66
CHAF1A-205ENST00000587580 HMOX1P09601 288 aa31.67■■■□□ 2.66
CHAF1A-205ENST00000587580 SLC27A3Q5K4L6 730 aa31.67■■■□□ 2.66
CHAF1A-205ENST00000587580 LRRC4BQ9NT99 713 aa31.67■■■□□ 2.66
CHAF1A-205ENST00000587580 PPP2R1AP30153 589 aa31.66■■■□□ 2.66
CHAF1A-205ENST00000587580 SLC15A2Q16348 729 aa31.64■■■□□ 2.66
CHAF1A-205ENST00000587580 CFAP53Q96M91 514 aa31.64■■■□□ 2.66
CHAF1A-205ENST00000587580 CASZ1Q86V15 1759 aa31.63■■■□□ 2.65
CHAF1A-205ENST00000587580 U2SURPO15042 1029 aaKnown RBP31.62■■■□□ 2.65
CHAF1A-205ENST00000587580 HSP90AB1P08238 724 aaKnown RBP31.62■■■□□ 2.65
CHAF1A-205ENST00000587580 PALLDQ8WX93 1383 aa31.62■■■□□ 2.65
CHAF1A-205ENST00000587580 PIGBQ92521 554 aa31.62■■■□□ 2.65
CHAF1A-205ENST00000587580 KCNQ4P56696 695 aa31.61■■■□□ 2.65
CHAF1A-205ENST00000587580 C1orf141Q5JVX7 400 aa31.61■■■□□ 2.65
CHAF1A-205ENST00000587580 TMOD3Q9NYL9 352 aa31.61■■■□□ 2.65
CHAF1A-205ENST00000587580 CCNL1Q9UK58 526 aaPredicted RBP31.61■■■□□ 2.65
CHAF1A-205ENST00000587580 DDX10Q13206 875 aaKnown RBP31.6■■■□□ 2.65
CHAF1A-205ENST00000587580 DCAF5Q96JK2 942 aa31.6■■■□□ 2.65
CHAF1A-205ENST00000587580 KDM6AO15550 1401 aaPredicted RBP31.59■■■□□ 2.65
CHAF1A-205ENST00000587580 ZNF827Q17R98 1081 aa31.59■■■□□ 2.65
CHAF1A-205ENST00000587580 SRCAPQ6ZRS2 3230 aa31.58■■■□□ 2.65
CHAF1A-205ENST00000587580 SMARCC1Q92922 1105 aaPredicted RBP31.57■■■□□ 2.64
CHAF1A-205ENST00000587580 C5P01031 1676 aa31.55■■■□□ 2.64
CHAF1A-205ENST00000587580 PDGFDQ9GZP0 370 aaPredicted RBP31.55■■■□□ 2.64
CHAF1A-205ENST00000587580 ERVV-2B6SEH9 535 aa31.54■■■□□ 2.64
CHAF1A-205ENST00000587580 AKT1S1Q96B36 256 aa31.54■■■□□ 2.64
CHAF1A-205ENST00000587580 AKAP4Q5JQC9 854 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 NUDCQ9Y266 331 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 SCN11AQ9UI33 1791 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 QSER1Q2KHR3 1735 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 TAF1LQ8IZX4 1826 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 TUBGCP6Q96RT7 1819 aa31.52■■■□□ 2.64
CHAF1A-205ENST00000587580 CABP4P57796 275 aa31.5■■■□□ 2.63
CHAF1A-205ENST00000587580 MTHFSDQ2M296 383 aaKnown RBP31.5■■■□□ 2.63
CHAF1A-205ENST00000587580 SPON1Q9HCB6 807 aa31.5■■■□□ 2.63
CHAF1A-205ENST00000587580 ASAP1Q9ULH1 1129 aa31.5■■■□□ 2.63
CHAF1A-205ENST00000587580 VIRMAQ69YN4 1812 aaKnown RBP31.48■■■□□ 2.63
CHAF1A-205ENST00000587580 ZBTB7AO95365 584 aa31.47■■■□□ 2.63
CHAF1A-205ENST00000587580 ATG3Q9NT62 314 aa31.47■■■□□ 2.63
CHAF1A-205ENST00000587580 TFCP2L1Q9NZI6 479 aa31.46■■■□□ 2.63
CHAF1A-205ENST00000587580 LOC102724428A0A0B4J2F2 783 aa31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 U2AF1L5P0DN76 240 aaPredicted RBP31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 SIK1P57059 783 aa31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 U2AF1Q01081 240 aaKnown RBP eCLIP31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 RALBP1Q15311 655 aa31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 RSPH6AQ9H0K4 717 aa31.45■■■□□ 2.63
CHAF1A-205ENST00000587580 C4BP0C0L5 1744 aa31.44■■■□□ 2.62
CHAF1A-205ENST00000587580 PRKAR2BP31323 418 aa31.44■■■□□ 2.62
CHAF1A-205ENST00000587580 PNPLA7Q6ZV29 1317 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms