RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 SRPK2P78362 688 aaKnown RBP5.65□□□□□ -1.5
LDLRAD4-209ENST00000587440 KCTD12Q96CX2 325 aaKnown RBP5.65□□□□□ -1.5
LDLRAD4-209ENST00000587440 STAC3Q96MF2 364 aa5.65□□□□□ -1.5
LDLRAD4-209ENST00000587440 TTBK1Q5TCY1 1321 aaPredicted RBP5.65□□□□□ -1.51
LDLRAD4-209ENST00000587440 ATAD2Q6PL18 1390 aa5.65□□□□□ -1.51
LDLRAD4-209ENST00000587440 WRNQ14191 1432 aaPredicted RBP eCLIP5.65□□□□□ -1.51
LDLRAD4-209ENST00000587440 NPATQ14207 1427 aa5.65□□□□□ -1.51
LDLRAD4-209ENST00000587440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.64□□□□□ -1.51
LDLRAD4-209ENST00000587440 COPS2P61201 443 aa5.64□□□□□ -1.51
LDLRAD4-209ENST00000587440 TJAP1Q5JTD0 557 aa5.64□□□□□ -1.51
LDLRAD4-209ENST00000587440 PPP1R15AO75807 674 aaPredicted RBP5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 NYAP1Q6ZVC0 841 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 SPSB2Q99619 263 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 MTRQ99707 1265 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 OCSTAMPQ9BR26 566 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 PPP1R12CQ9BZL4 782 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 FAM135BQ49AJ0 1406 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 C9orf84Q5VXU9 1444 aa5.63□□□□□ -1.51
LDLRAD4-209ENST00000587440 SUPT6HQ7KZ85 1726 aaKnown RBP5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 PALM3A6NDB9 673 aaPredicted RBP5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZPR1O75312 459 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 ADH1BP00325 375 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 CCDC125Q86Z20 511 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 PBXIP1Q96AQ6 731 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 FKBPLQ9UIM3 349 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 CDK13Q14004 1512 aaKnown RBP5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 VWDEQ8N2E2 1590 aa5.62□□□□□ -1.51
LDLRAD4-209ENST00000587440 RGS12O14924 1447 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 ATP10AO60312 1499 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 ABCA8O94911 1581 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 RFX1P22670 979 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZNF516Q92618 1163 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 EVA1BQ9NVM1 165 aa5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZC3H4Q9UPT8 1303 aaKnown RBP5.61□□□□□ -1.51
LDLRAD4-209ENST00000587440 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 CFAP74Q9C0B2 1584 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 JCADQ9P266 1359 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 SOX11P35716 441 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 NR1H3Q13133 447 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 NUDT12Q9BQG2 462 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 MYT1LQ9UL68 1186 aa5.6□□□□□ -1.51
LDLRAD4-209ENST00000587440 KDM5CP41229 1560 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 NWD1Q149M9 1564 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 CEP170BQ9Y4F5 1589 aaPredicted RBP5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 DISP1Q96F81 1524 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 CNTLNQ9NXG0 1405 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZBTB7CA1YPR0 619 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 CARNS1A5YM72 827 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 KCNH2Q12809 1159 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 TBC1D9Q6ZT07 1266 aa5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 ZNF784Q8NCA9 323 aaPredicted RBP5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 TFIP11Q9UBB9 837 aaKnown RBP5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 MAFBQ9Y5Q3 323 aaPredicted RBP5.59□□□□□ -1.51
LDLRAD4-209ENST00000587440 MYO3AQ8NEV4 1616 aa5.59□□□□□ -1.52
LDLRAD4-209ENST00000587440 AGLP35573 1532 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 SPATA31A6Q5VVP1 1343 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 PIK3CDO00329 1044 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 LMOD1P29536 600 aaPredicted RBP5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 PRELPP51888 382 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 PTCRAQ6ISU1 281 aaPredicted RBP5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 NKX2-3Q8TAU0 364 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 IL21Q9HBE4 155 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 HECW1Q76N89 1606 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 NEURL4Q96JN8 1562 aa5.58□□□□□ -1.52
LDLRAD4-209ENST00000587440 PTPN5P54829 565 aa5.57□□□□□ -1.52
LDLRAD4-209ENST00000587440 SEMA3FQ13275 785 aa5.57□□□□□ -1.52
LDLRAD4-209ENST00000587440 AEBP1Q8IUX7 1158 aa5.57□□□□□ -1.52
LDLRAD4-209ENST00000587440 KCTD17Q8N5Z5 321 aa5.57□□□□□ -1.52
LDLRAD4-209ENST00000587440 IQGAP2Q13576 1575 aa5.57□□□□□ -1.52
LDLRAD4-209ENST00000587440 MROH2AA6NES4 1674 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 LRP6O75581 1613 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 REREQ9P2R6 1566 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 CTHP32929 405 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 EIF4G2P78344 907 aaKnown RBP eCLIP5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 PDXDC2PQ6P474 469 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 SH3BP5LQ7L8J4 393 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 PNMA1Q8ND90 353 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 FAM174AQ8TBP5 190 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 GPKOWQ92917 476 aaPredicted RBP eCLIP5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 SLC6A16Q9GZN6 736 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 GPSM3Q9Y4H4 160 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
LDLRAD4-209ENST00000587440 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 ATP9BO43861 1147 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 S1PR4O95977 384 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 CDCA8Q53HL2 280 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 MEX3CQ5U5Q3 659 aaKnown RBP5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 SH3RF1Q7Z6J0 888 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 UNC93B1Q9H1C4 597 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 ESF1Q9H501 851 aaKnown RBP5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 ROBO1Q9Y6N7 1651 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 FGD6Q6ZV73 1430 aa5.55□□□□□ -1.52
LDLRAD4-209ENST00000587440 ACIN1Q9UKV3 1341 aaKnown RBP5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 ATG7O95352 703 aa5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 ITGBL1O95965 494 aaPredicted RBP5.54□□□□□ -1.52
LDLRAD4-209ENST00000587440 RBM6P78332 1123 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms