RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
SDF2-204ENST00000587338 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
SDF2-204ENST00000587338 SBNO2Q9Y2G9 1366 aa12.22□□□□□ -0.45
SDF2-204ENST00000587338 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
SDF2-204ENST00000587338 NSD2O96028 1365 aa12.21□□□□□ -0.45
SDF2-204ENST00000587338 HSPA6P17066 643 aa12.21□□□□□ -0.45
SDF2-204ENST00000587338 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
SDF2-204ENST00000587338 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
SDF2-204ENST00000587338 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
SDF2-204ENST00000587338 CD163L1Q9NR16 1453 aa12.21□□□□□ -0.46
SDF2-204ENST00000587338 LY75O60449 1722 aa12.2□□□□□ -0.46
SDF2-204ENST00000587338 HDGFL2Q7Z4V5 671 aaPredicted RBP12.2□□□□□ -0.46
SDF2-204ENST00000587338 ADCY9O60503 1353 aa12.19□□□□□ -0.46
SDF2-204ENST00000587338 IP6K1Q92551 441 aa12.19□□□□□ -0.46
SDF2-204ENST00000587338 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
SDF2-204ENST00000587338 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
SDF2-204ENST00000587338 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
SDF2-204ENST00000587338 USP47Q96K76 1375 aa12.18□□□□□ -0.46
SDF2-204ENST00000587338 ZCRB1Q8TBF4 217 aaKnown RBP12.17□□□□□ -0.46
SDF2-204ENST00000587338 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
SDF2-204ENST00000587338 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
SDF2-204ENST00000587338 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
SDF2-204ENST00000587338 MEGF6O75095 1541 aa12.16□□□□□ -0.46
SDF2-204ENST00000587338 A0A1W2PP64 1363 aa12.16□□□□□ -0.46
SDF2-204ENST00000587338 HOXC9P31274 260 aa12.15□□□□□ -0.46
SDF2-204ENST00000587338 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
SDF2-204ENST00000587338 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
SDF2-204ENST00000587338 C5P01031 1676 aa12.14□□□□□ -0.47
SDF2-204ENST00000587338 AMPHP49418 695 aa12.14□□□□□ -0.47
SDF2-204ENST00000587338 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
SDF2-204ENST00000587338 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
SDF2-204ENST00000587338 NEUROD1Q13562 356 aa12.13□□□□□ -0.47
SDF2-204ENST00000587338 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
SDF2-204ENST00000587338 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
SDF2-204ENST00000587338 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
SDF2-204ENST00000587338 KIF3CO14782 793 aa12.12□□□□□ -0.47
SDF2-204ENST00000587338 PHF14O94880 888 aa12.12□□□□□ -0.47
SDF2-204ENST00000587338 COG3Q96JB2 828 aa12.12□□□□□ -0.47
SDF2-204ENST00000587338 AK7Q96M32 723 aa12.12□□□□□ -0.47
SDF2-204ENST00000587338 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
SDF2-204ENST00000587338 FBLN1P23142 703 aa12.11□□□□□ -0.47
SDF2-204ENST00000587338 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
SDF2-204ENST00000587338 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
SDF2-204ENST00000587338 APLP1P51693 650 aa12.1□□□□□ -0.47
SDF2-204ENST00000587338 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
SDF2-204ENST00000587338 MPRIPQ6WCQ1 1025 aa12.1□□□□□ -0.47
SDF2-204ENST00000587338 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
SDF2-204ENST00000587338 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
SDF2-204ENST00000587338 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
SDF2-204ENST00000587338 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
SDF2-204ENST00000587338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
SDF2-204ENST00000587338 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
SDF2-204ENST00000587338 RRS1Q15050 365 aaKnown RBP12.08□□□□□ -0.48
SDF2-204ENST00000587338 NSD3Q9BZ95 1437 aa12.08□□□□□ -0.48
SDF2-204ENST00000587338 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
SDF2-204ENST00000587338 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
SDF2-204ENST00000587338 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
SDF2-204ENST00000587338 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
SDF2-204ENST00000587338 TOMM70O94826 608 aa12.05□□□□□ -0.48
SDF2-204ENST00000587338 PCNTO95613 3336 aa12.04□□□□□ -0.48
SDF2-204ENST00000587338 CYP27B1O15528 508 aa12.04□□□□□ -0.48
SDF2-204ENST00000587338 SSFA2P28290 1259 aa12.04□□□□□ -0.48
SDF2-204ENST00000587338 DNAJC5GQ8N7S2 189 aa12.04□□□□□ -0.48
SDF2-204ENST00000587338 PUS7Q96PZ0 661 aaKnown RBP12.04□□□□□ -0.48
SDF2-204ENST00000587338 PXDNLA1KZ92 1463 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 GNPATO15228 680 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 MMP10P09238 476 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 PIGBQ92521 554 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 GGNBP2Q9H3C7 697 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
SDF2-204ENST00000587338 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
SDF2-204ENST00000587338 SIK1P57059 783 aa12.02□□□□□ -0.49
SDF2-204ENST00000587338 HSP90AB2PQ58FF8 381 aa12.02□□□□□ -0.49
SDF2-204ENST00000587338 INSRP06213 1382 aa12.02□□□□□ -0.49
SDF2-204ENST00000587338 ITGB4P16144 1822 aa12.02□□□□□ -0.49
SDF2-204ENST00000587338 CAPN15O75808 1086 aa12.01□□□□□ -0.49
SDF2-204ENST00000587338 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
SDF2-204ENST00000587338 FLT4P35916 1363 aa12.01□□□□□ -0.49
SDF2-204ENST00000587338 A0A0G2JLW4 131 aa12□□□□□ -0.49
SDF2-204ENST00000587338 FYB1O15117 783 aa12□□□□□ -0.49
SDF2-204ENST00000587338 HTRA3P83110 453 aa12□□□□□ -0.49
SDF2-204ENST00000587338 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
SDF2-204ENST00000587338 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
SDF2-204ENST00000587338 WDR90Q96KV7 1748 aa12□□□□□ -0.49
SDF2-204ENST00000587338 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
SDF2-204ENST00000587338 ITPK1Q13572 414 aa11.99□□□□□ -0.49
SDF2-204ENST00000587338 TESK2Q96S53 571 aa11.99□□□□□ -0.49
SDF2-204ENST00000587338 TMOD3Q9NYL9 352 aa11.99□□□□□ -0.49
SDF2-204ENST00000587338 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
SDF2-204ENST00000587338 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
SDF2-204ENST00000587338 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms