RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
NFIX-208ENST00000587260 TRPC5Q9UL62 973 aaPredicted RBP19.72■□□□□ 0.75
NFIX-208ENST00000587260 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
NFIX-208ENST00000587260 OVOS2A0A0G2JMS6 1433 aa19.71■□□□□ 0.75
NFIX-208ENST00000587260 DISP2A7MBM2 1401 aa19.71■□□□□ 0.75
NFIX-208ENST00000587260 NEFMP07197 916 aa19.71■□□□□ 0.75
NFIX-208ENST00000587260 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
NFIX-208ENST00000587260 IL2RBP14784 551 aa19.7■□□□□ 0.74
NFIX-208ENST00000587260 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
NFIX-208ENST00000587260 THSD7AQ9UPZ6 1657 aa19.69■□□□□ 0.74
NFIX-208ENST00000587260 QTRT2Q9H974 415 aaKnown RBP19.69■□□□□ 0.74
NFIX-208ENST00000587260 APAF1O14727 1248 aa19.68■□□□□ 0.74
NFIX-208ENST00000587260 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
NFIX-208ENST00000587260 GJD4Q96KN9 370 aaPredicted RBP19.68■□□□□ 0.74
NFIX-208ENST00000587260 THRAP3Q9Y2W1 955 aaKnown RBP19.68■□□□□ 0.74
NFIX-208ENST00000587260 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
NFIX-208ENST00000587260 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
NFIX-208ENST00000587260 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
NFIX-208ENST00000587260 A0A0G2JS52 829 aa19.66■□□□□ 0.74
NFIX-208ENST00000587260 MYT1Q01538 1121 aa19.66■□□□□ 0.74
NFIX-208ENST00000587260 MTHFSDQ2M296 383 aaKnown RBP19.66■□□□□ 0.74
NFIX-208ENST00000587260 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
NFIX-208ENST00000587260 TNS2Q63HR2 1409 aa19.65■□□□□ 0.74
NFIX-208ENST00000587260 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
NFIX-208ENST00000587260 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
NFIX-208ENST00000587260 RGS17Q9UGC6 210 aaPredicted RBP19.65■□□□□ 0.74
NFIX-208ENST00000587260 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
NFIX-208ENST00000587260 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
NFIX-208ENST00000587260 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
NFIX-208ENST00000587260 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
NFIX-208ENST00000587260 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
NFIX-208ENST00000587260 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
NFIX-208ENST00000587260 AMOTQ4VCS5 1084 aa19.62■□□□□ 0.73
NFIX-208ENST00000587260 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
NFIX-208ENST00000587260 SPG7Q9UQ90 795 aa19.62■□□□□ 0.73
NFIX-208ENST00000587260 ZNF521Q96K83 1311 aa19.62■□□□□ 0.73
NFIX-208ENST00000587260 PDE3BQ13370 1112 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 BRWD3Q6RI45 1802 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 ZCRB1Q8TBF4 217 aaKnown RBP19.61■□□□□ 0.73
NFIX-208ENST00000587260 CDCA7Q9BWT1 371 aaPredicted RBP19.61■□□□□ 0.73
NFIX-208ENST00000587260 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 PCDH11XQ9BZA7 1347 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 PCDH11YQ9BZA8 1340 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 RIPK4P57078 832 aa19.61■□□□□ 0.73
NFIX-208ENST00000587260 DDB1Q16531 1140 aa19.6■□□□□ 0.73
NFIX-208ENST00000587260 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
NFIX-208ENST00000587260 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
NFIX-208ENST00000587260 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
NFIX-208ENST00000587260 POTEAQ6S8J7 498 aa19.59■□□□□ 0.73
NFIX-208ENST00000587260 DDX54Q8TDD1 881 aaKnown RBP19.59■□□□□ 0.73
NFIX-208ENST00000587260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.73
NFIX-208ENST00000587260 TOGARAM1Q9Y4F4 1720 aa19.58■□□□□ 0.73
NFIX-208ENST00000587260 EXOC5O00471 708 aa19.58■□□□□ 0.73
NFIX-208ENST00000587260 DOT1LQ8TEK3 1739 aa19.58■□□□□ 0.72
NFIX-208ENST00000587260 CYP27B1O15528 508 aa19.57■□□□□ 0.72
NFIX-208ENST00000587260 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
NFIX-208ENST00000587260 ADAMTS7Q9UKP4 1686 aa19.57■□□□□ 0.72
NFIX-208ENST00000587260 PHKG2P15735 406 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 RXRBP28702 533 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 AKAP4Q5JQC9 854 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 SEPT12Q8IYM1 358 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 GNAT3A8MTJ3 354 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 DCTN1Q14203 1278 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 TRIM35Q9UPQ4 493 aa19.56■□□□□ 0.72
NFIX-208ENST00000587260 RGS12O14924 1447 aa19.55■□□□□ 0.72
NFIX-208ENST00000587260 MCM10Q7L590 875 aa19.55■□□□□ 0.72
NFIX-208ENST00000587260 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
NFIX-208ENST00000587260 THUMPD2Q9BTF0 503 aaKnown RBP19.55■□□□□ 0.72
NFIX-208ENST00000587260 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
NFIX-208ENST00000587260 ONECUT3O60422 494 aaPredicted RBP19.54■□□□□ 0.72
NFIX-208ENST00000587260 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
NFIX-208ENST00000587260 MPRIPQ6WCQ1 1025 aa19.54■□□□□ 0.72
NFIX-208ENST00000587260 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
NFIX-208ENST00000587260 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.72
NFIX-208ENST00000587260 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
NFIX-208ENST00000587260 MARCH10Q8NA82 808 aaPredicted RBP19.51■□□□□ 0.71
NFIX-208ENST00000587260 ITGB4P16144 1822 aa19.51■□□□□ 0.71
NFIX-208ENST00000587260 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
NFIX-208ENST00000587260 SOCS7O14512 581 aa19.5■□□□□ 0.71
NFIX-208ENST00000587260 HTATSF1O43719 755 aaKnown RBP19.5■□□□□ 0.71
NFIX-208ENST00000587260 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
NFIX-208ENST00000587260 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
NFIX-208ENST00000587260 IL16Q14005 1332 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 MRC1P22897 1456 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
NFIX-208ENST00000587260 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
NFIX-208ENST00000587260 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 CDCA7LQ96GN5 454 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
NFIX-208ENST00000587260 CEMIPQ8WUJ3 1361 aa19.48■□□□□ 0.71
NFIX-208ENST00000587260 E9PSI1 815 aa19.47■□□□□ 0.71
NFIX-208ENST00000587260 NKX1-1Q15270 411 aaPredicted RBP19.47■□□□□ 0.71
NFIX-208ENST00000587260 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
NFIX-208ENST00000587260 SBF2Q86WG5 1849 aa19.47■□□□□ 0.71
NFIX-208ENST00000587260 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
NFIX-208ENST00000587260 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
NFIX-208ENST00000587260 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
NFIX-208ENST00000587260 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms