RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 RGPD4Q7Z3J3 1758 aa27.6■■■□□ 2.01
VAT1-203ENST00000587062 KCNQ2O43526 872 aa27.59■■■□□ 2.01
VAT1-203ENST00000587062 RREB1Q92766 1687 aa27.59■■■□□ 2.01
VAT1-203ENST00000587062 PCDH11XQ9BZA7 1347 aa27.58■■■□□ 2.01
VAT1-203ENST00000587062 PCDH11YQ9BZA8 1340 aa27.58■■■□□ 2.01
VAT1-203ENST00000587062 MEGF6O75095 1541 aa27.57■■■□□ 2
VAT1-203ENST00000587062 NHSQ6T4R5 1651 aa27.57■■■□□ 2
VAT1-203ENST00000587062 PTF1AQ7RTS3 328 aa27.56■■■□□ 2
VAT1-203ENST00000587062 SYTL4Q96C24 671 aaPredicted RBP27.56■■■□□ 2
VAT1-203ENST00000587062 EYA1Q99502 592 aa27.56■■■□□ 2
VAT1-203ENST00000587062 SPG7Q9UQ90 795 aa27.56■■■□□ 2
VAT1-203ENST00000587062 AMER1Q5JTC6 1135 aaPredicted RBP27.55■■■□□ 2
VAT1-203ENST00000587062 EIF4A2Q14240 407 aaKnown RBP27.54■■■□□ 2
VAT1-203ENST00000587062 TXNRD1Q16881 649 aa27.54■■■□□ 2
VAT1-203ENST00000587062 NUP188Q5SRE5 1749 aa27.53■■■□□ 2
VAT1-203ENST00000587062 PER1O15534 1290 aaPredicted RBP27.51■■□□□ 1.99
VAT1-203ENST00000587062 PRIM1P49642 420 aaKnown RBP27.51■■□□□ 1.99
VAT1-203ENST00000587062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.51■■□□□ 1.99
VAT1-203ENST00000587062 HMGB2P26583 209 aaKnown RBP27.5■■□□□ 1.99
VAT1-203ENST00000587062 STK32BQ9NY57 414 aa27.5■■□□□ 1.99
VAT1-203ENST00000587062 CC2D1BQ5T0F9 858 aaKnown RBP27.49■■□□□ 1.99
VAT1-203ENST00000587062 NCAPD2Q15021 1401 aa27.49■■□□□ 1.99
VAT1-203ENST00000587062 PROM2Q8N271 834 aa27.48■■□□□ 1.99
VAT1-203ENST00000587062 PLEKHG2Q9H7P9 1386 aa27.48■■□□□ 1.99
VAT1-203ENST00000587062 NPC1L1Q9UHC9 1359 aa27.47■■□□□ 1.99
VAT1-203ENST00000587062 BTAF1O14981 1849 aa27.46■■□□□ 1.99
VAT1-203ENST00000587062 SLC27A3Q5K4L6 730 aa27.46■■□□□ 1.99
VAT1-203ENST00000587062 SHANK3Q9BYB0 1731 aa27.44■■□□□ 1.98
VAT1-203ENST00000587062 IGSF1Q8N6C5 1336 aa27.44■■□□□ 1.98
VAT1-203ENST00000587062 MTHFSP49914 203 aa27.43■■□□□ 1.98
VAT1-203ENST00000587062 IFNL2Q8IZJ0 200 aa27.43■■□□□ 1.98
VAT1-203ENST00000587062 DOT1LQ8TEK3 1739 aa27.42■■□□□ 1.98
VAT1-203ENST00000587062 CYP27B1O15528 508 aa27.42■■□□□ 1.98
VAT1-203ENST00000587062 PLEKHO1Q53GL0 409 aaPredicted RBP27.42■■□□□ 1.98
VAT1-203ENST00000587062 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
VAT1-203ENST00000587062 AMOTQ4VCS5 1084 aa27.41■■□□□ 1.98
VAT1-203ENST00000587062 LRP5O75197 1615 aa27.41■■□□□ 1.98
VAT1-203ENST00000587062 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
VAT1-203ENST00000587062 PKD1L3Q7Z443 1732 aa27.4■■□□□ 1.98
VAT1-203ENST00000587062 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.98
VAT1-203ENST00000587062 NKX1-1Q15270 411 aaPredicted RBP27.39■■□□□ 1.98
VAT1-203ENST00000587062 MPRIPQ6WCQ1 1025 aa27.38■■□□□ 1.97
VAT1-203ENST00000587062 SPON1Q9HCB6 807 aa27.38■■□□□ 1.97
VAT1-203ENST00000587062 SMARCC1Q92922 1105 aaPredicted RBP27.37■■□□□ 1.97
VAT1-203ENST00000587062 ANO8Q9HCE9 1232 aaPredicted RBP27.37■■□□□ 1.97
VAT1-203ENST00000587062 IL13P35225 146 aa27.36■■□□□ 1.97
VAT1-203ENST00000587062 DIAPH1O60610 1272 aaKnown RBP27.35■■□□□ 1.97
VAT1-203ENST00000587062 PHKG2P15735 406 aa27.35■■□□□ 1.97
VAT1-203ENST00000587062 SULT6B1Q6IMI4 303 aa27.35■■□□□ 1.97
VAT1-203ENST00000587062 CCNL1Q9UK58 526 aaPredicted RBP27.34■■□□□ 1.97
VAT1-203ENST00000587062 C1orf141Q5JVX7 400 aa27.33■■□□□ 1.97
VAT1-203ENST00000587062 TMOD3Q9NYL9 352 aa27.33■■□□□ 1.97
VAT1-203ENST00000587062 CFAP53Q96M91 514 aa27.32■■□□□ 1.96
VAT1-203ENST00000587062 PPP1R1BQ9UD71 204 aaPredicted RBP27.32■■□□□ 1.96
VAT1-203ENST00000587062 LRRC4BQ9NT99 713 aa27.31■■□□□ 1.96
VAT1-203ENST00000587062 ZNF530Q6P9A1 599 aaPredicted RBP27.3■■□□□ 1.96
VAT1-203ENST00000587062 DCAF5Q96JK2 942 aa27.3■■□□□ 1.96
VAT1-203ENST00000587062 KDRP35968 1356 aa27.28■■□□□ 1.96
VAT1-203ENST00000587062 AEBP1Q8IUX7 1158 aa27.28■■□□□ 1.96
VAT1-203ENST00000587062 TFCP2L1Q9NZI6 479 aa27.28■■□□□ 1.96
VAT1-203ENST00000587062 LY75O60449 1722 aa27.27■■□□□ 1.96
VAT1-203ENST00000587062 PALLDQ8WX93 1383 aa27.27■■□□□ 1.96
VAT1-203ENST00000587062 ERVV-2B6SEH9 535 aa27.27■■□□□ 1.96
VAT1-203ENST00000587062 PIGBQ92521 554 aa27.27■■□□□ 1.96
VAT1-203ENST00000587062 ITGB4P16144 1822 aa27.25■■□□□ 1.95
VAT1-203ENST00000587062 AKT1S1Q96B36 256 aa27.25■■□□□ 1.95
VAT1-203ENST00000587062 MTFR1LQ9H019 292 aa27.24■■□□□ 1.95
VAT1-203ENST00000587062 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
VAT1-203ENST00000587062 U2SURPO15042 1029 aaKnown RBP27.23■■□□□ 1.95
VAT1-203ENST00000587062 SLC16A10Q8TF71 515 aa27.23■■□□□ 1.95
VAT1-203ENST00000587062 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
VAT1-203ENST00000587062 ZBTB7AO95365 584 aa27.22■■□□□ 1.95
VAT1-203ENST00000587062 HMOX1P09601 288 aa27.22■■□□□ 1.95
VAT1-203ENST00000587062 ZEB1P37275 1124 aaPredicted RBP27.22■■□□□ 1.95
VAT1-203ENST00000587062 KCNQ4P56696 695 aa27.22■■□□□ 1.95
VAT1-203ENST00000587062 CABP4P57796 275 aa27.22■■□□□ 1.95
VAT1-203ENST00000587062 ZNF827Q17R98 1081 aa27.22■■□□□ 1.95
VAT1-203ENST00000587062 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
VAT1-203ENST00000587062 CASZ1Q86V15 1759 aa27.2■■□□□ 1.95
VAT1-203ENST00000587062 AKAP4Q5JQC9 854 aa27.2■■□□□ 1.94
VAT1-203ENST00000587062 FLAD1Q8NFF5 587 aa27.19■■□□□ 1.94
VAT1-203ENST00000587062 ATF5Q9Y2D1 282 aaPredicted RBP27.19■■□□□ 1.94
VAT1-203ENST00000587062 PDGFDQ9GZP0 370 aaPredicted RBP27.18■■□□□ 1.94
VAT1-203ENST00000587062 DCAF8L1A6NGE4 600 aa27.17■■□□□ 1.94
VAT1-203ENST00000587062 PPP2R1AP30153 589 aa27.17■■□□□ 1.94
VAT1-203ENST00000587062 LOC102724428A0A0B4J2F2 783 aa27.16■■□□□ 1.94
VAT1-203ENST00000587062 MSH5O43196 834 aa27.16■■□□□ 1.94
VAT1-203ENST00000587062 SIK1P57059 783 aa27.16■■□□□ 1.94
VAT1-203ENST00000587062 AK7Q96M32 723 aa27.15■■□□□ 1.94
VAT1-203ENST00000587062 ASAP1Q9ULH1 1129 aa27.15■■□□□ 1.94
VAT1-203ENST00000587062 QSER1Q2KHR3 1735 aa27.14■■□□□ 1.94
VAT1-203ENST00000587062 ATP6V1AP38606 617 aa27.14■■□□□ 1.94
VAT1-203ENST00000587062 ATG3Q9NT62 314 aa27.14■■□□□ 1.94
VAT1-203ENST00000587062 POLD1P28340 1107 aa27.13■■□□□ 1.93
VAT1-203ENST00000587062 PNPLA7Q6ZV29 1317 aa27.13■■□□□ 1.93
VAT1-203ENST00000587062 C5P01031 1676 aa27.12■■□□□ 1.93
VAT1-203ENST00000587062 NFATC2IPQ8NCF5 419 aa27.11■■□□□ 1.93
VAT1-203ENST00000587062 GAS2L2Q8NHY3 880 aa27.11■■□□□ 1.93
VAT1-203ENST00000587062 RBM42Q9BTD8 480 aaKnown RBP27.11■■□□□ 1.93
VAT1-203ENST00000587062 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms