RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
CALR-203ENST00000586803 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
CALR-203ENST00000586803 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
CALR-203ENST00000586803 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
CALR-203ENST00000586803 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
CALR-203ENST00000586803 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
CALR-203ENST00000586803 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
CALR-203ENST00000586803 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
CALR-203ENST00000586803 ITGB4P16144 1822 aa18.19■□□□□ 0.5
CALR-203ENST00000586803 PLSCR1O15162 318 aa18.19■□□□□ 0.5
CALR-203ENST00000586803 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
CALR-203ENST00000586803 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
CALR-203ENST00000586803 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
CALR-203ENST00000586803 QSER1Q2KHR3 1735 aa18.18■□□□□ 0.5
CALR-203ENST00000586803 TATP17735 454 aaPredicted RBP18.18■□□□□ 0.5
CALR-203ENST00000586803 AMER1Q5JTC6 1135 aaPredicted RBP18.18■□□□□ 0.5
CALR-203ENST00000586803 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
CALR-203ENST00000586803 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
CALR-203ENST00000586803 PTF1AQ7RTS3 328 aa18.16■□□□□ 0.5
CALR-203ENST00000586803 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
CALR-203ENST00000586803 TUBGCP6Q96RT7 1819 aa18.15■□□□□ 0.5
CALR-203ENST00000586803 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
CALR-203ENST00000586803 EIF4A2Q14240 407 aaKnown RBP18.15■□□□□ 0.5
CALR-203ENST00000586803 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
CALR-203ENST00000586803 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
CALR-203ENST00000586803 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
CALR-203ENST00000586803 C5P01031 1676 aa18.13■□□□□ 0.49
CALR-203ENST00000586803 KCNQ2O43526 872 aa18.13■□□□□ 0.49
CALR-203ENST00000586803 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
CALR-203ENST00000586803 EYA1Q99502 592 aa18.13■□□□□ 0.49
CALR-203ENST00000586803 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
CALR-203ENST00000586803 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
CALR-203ENST00000586803 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
CALR-203ENST00000586803 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
CALR-203ENST00000586803 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
CALR-203ENST00000586803 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
CALR-203ENST00000586803 KDRP35968 1356 aa18.08■□□□□ 0.49
CALR-203ENST00000586803 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
CALR-203ENST00000586803 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
CALR-203ENST00000586803 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
CALR-203ENST00000586803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.483e-35■□□□□ 9
CALR-203ENST00000586803 CYP27B1O15528 508 aa18.06■□□□□ 0.48
CALR-203ENST00000586803 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
CALR-203ENST00000586803 PROM2Q8N271 834 aa18.05■□□□□ 0.48
CALR-203ENST00000586803 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
CALR-203ENST00000586803 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
CALR-203ENST00000586803 SLC27A3Q5K4L6 730 aa18.03■□□□□ 0.48
CALR-203ENST00000586803 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
CALR-203ENST00000586803 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.47
CALR-203ENST00000586803 PALLDQ8WX93 1383 aa18.02■□□□□ 0.47
CALR-203ENST00000586803 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
CALR-203ENST00000586803 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 COL24A1Q17RW2 1714 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 PHKG2P15735 406 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 IL13P35225 146 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 MTHFSP49914 203 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
CALR-203ENST00000586803 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
CALR-203ENST00000586803 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
CALR-203ENST00000586803 MRC1P22897 1456 aa18■□□□□ 0.47
CALR-203ENST00000586803 KDM6AO15550 1401 aaPredicted RBP17.99■□□□□ 0.47
CALR-203ENST00000586803 COL5A3P25940 1745 aaPredicted RBP17.99■□□□□ 0.47
CALR-203ENST00000586803 SLC15A2Q16348 729 aa17.99■□□□□ 0.47
CALR-203ENST00000586803 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
CALR-203ENST00000586803 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
CALR-203ENST00000586803 SULT6B1Q6IMI4 303 aa17.98■□□□□ 0.47
CALR-203ENST00000586803 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
CALR-203ENST00000586803 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
CALR-203ENST00000586803 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
CALR-203ENST00000586803 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
CALR-203ENST00000586803 CCNL1Q9UK58 526 aaPredicted RBP17.97■□□□□ 0.47
CALR-203ENST00000586803 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
CALR-203ENST00000586803 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
CALR-203ENST00000586803 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
CALR-203ENST00000586803 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
CALR-203ENST00000586803 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
CALR-203ENST00000586803 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
CALR-203ENST00000586803 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
CALR-203ENST00000586803 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
CALR-203ENST00000586803 TJP1Q07157 1748 aa17.94■□□□□ 0.46
CALR-203ENST00000586803 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
CALR-203ENST00000586803 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
CALR-203ENST00000586803 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
CALR-203ENST00000586803 SIPA1L3O60292 1781 aaPredicted RBP17.93■□□□□ 0.46
CALR-203ENST00000586803 UBR2Q8IWV8 1755 aa17.92■□□□□ 0.46
CALR-203ENST00000586803 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
CALR-203ENST00000586803 PIGBQ92521 554 aa17.92■□□□□ 0.46
CALR-203ENST00000586803 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
CALR-203ENST00000586803 HMOX1P09601 288 aa17.9■□□□□ 0.46
CALR-203ENST00000586803 MTFR1LQ9H019 292 aa17.9■□□□□ 0.46
CALR-203ENST00000586803 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
CALR-203ENST00000586803 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
CALR-203ENST00000586803 KCNQ4P56696 695 aa17.89■□□□□ 0.45
CALR-203ENST00000586803 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
CALR-203ENST00000586803 C4AP0C0L4 1744 aa17.89■□□□□ 0.45
CALR-203ENST00000586803 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
CALR-203ENST00000586803 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
CALR-203ENST00000586803 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
CALR-203ENST00000586803 PPP1R1BQ9UD71 204 aaPredicted RBP17.88■□□□□ 0.45
CALR-203ENST00000586803 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms