RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 NSD2O96028 1365 aa16.84■□□□□ 0.29
DNMT1-209ENST00000586799 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
DNMT1-209ENST00000586799 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
DNMT1-209ENST00000586799 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
DNMT1-209ENST00000586799 APLP1P51693 650 aa16.82■□□□□ 0.28
DNMT1-209ENST00000586799 NME9Q86XW9 330 aa16.82■□□□□ 0.28
DNMT1-209ENST00000586799 DNAJC5GQ8N7S2 189 aa16.82■□□□□ 0.28
DNMT1-209ENST00000586799 WWC3Q9ULE0 1092 aa16.78■□□□□ 0.28
DNMT1-209ENST00000586799 USP47Q96K76 1375 aa16.77■□□□□ 0.28
DNMT1-209ENST00000586799 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
DNMT1-209ENST00000586799 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
DNMT1-209ENST00000586799 IP6K1Q92551 441 aa16.77■□□□□ 0.28
DNMT1-209ENST00000586799 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
DNMT1-209ENST00000586799 C5P01031 1676 aa16.76■□□□□ 0.27
DNMT1-209ENST00000586799 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
DNMT1-209ENST00000586799 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
DNMT1-209ENST00000586799 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-209ENST00000586799 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
DNMT1-209ENST00000586799 TOMM70O94826 608 aa16.74■□□□□ 0.27
DNMT1-209ENST00000586799 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-209ENST00000586799 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
DNMT1-209ENST00000586799 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
DNMT1-209ENST00000586799 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
DNMT1-209ENST00000586799 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
DNMT1-209ENST00000586799 MEGF6O75095 1541 aa16.71■□□□□ 0.27
DNMT1-209ENST00000586799 CAPN15O75808 1086 aa16.7■□□□□ 0.26
DNMT1-209ENST00000586799 HMGB2P26583 209 aaKnown RBP16.7■□□□□ 0.26
DNMT1-209ENST00000586799 AMIGO3Q86WK7 504 aa16.7■□□□□ 0.26
DNMT1-209ENST00000586799 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
DNMT1-209ENST00000586799 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
DNMT1-209ENST00000586799 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
DNMT1-209ENST00000586799 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
DNMT1-209ENST00000586799 WDR90Q96KV7 1748 aa16.69■□□□□ 0.26
DNMT1-209ENST00000586799 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
DNMT1-209ENST00000586799 ROCK2O75116 1388 aaKnown RBP16.68■□□□□ 0.26
DNMT1-209ENST00000586799 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
DNMT1-209ENST00000586799 HOXC9P31274 260 aa16.68■□□□□ 0.26
DNMT1-209ENST00000586799 SMIM5Q71RC9 77 aa16.68■□□□□ 0.26
DNMT1-209ENST00000586799 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
DNMT1-209ENST00000586799 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 AK7Q96M32 723 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 NMRK2Q9NPI5 230 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
DNMT1-209ENST00000586799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
DNMT1-209ENST00000586799 PHF14O94880 888 aa16.66■□□□□ 0.26
DNMT1-209ENST00000586799 HTRA3P83110 453 aa16.66■□□□□ 0.26
DNMT1-209ENST00000586799 FBLN1P23142 703 aa16.65■□□□□ 0.26
DNMT1-209ENST00000586799 AMPHP49418 695 aa16.65■□□□□ 0.26
DNMT1-209ENST00000586799 PRELPP51888 382 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 TNS4Q8IZW8 715 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
DNMT1-209ENST00000586799 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 A0A1W2PP64 1363 aa16.64■□□□□ 0.25
DNMT1-209ENST00000586799 SSFA2P28290 1259 aa16.62■□□□□ 0.25
DNMT1-209ENST00000586799 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
DNMT1-209ENST00000586799 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
DNMT1-209ENST00000586799 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-209ENST00000586799 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
DNMT1-209ENST00000586799 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-209ENST00000586799 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 ITGB4P16144 1822 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 COG3Q96JB2 828 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
DNMT1-209ENST00000586799 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
DNMT1-209ENST00000586799 ARHGAP27Q6ZUM4 889 aa16.6■□□□□ 0.25
DNMT1-209ENST00000586799 PCDH11XQ9BZA7 1347 aa16.6■□□□□ 0.25
DNMT1-209ENST00000586799 PCDH11YQ9BZA8 1340 aa16.6■□□□□ 0.25
DNMT1-209ENST00000586799 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
DNMT1-209ENST00000586799 TGFB2P61812 414 aa16.59■□□□□ 0.25
DNMT1-209ENST00000586799 FSTL1Q12841 308 aa16.59■□□□□ 0.25
DNMT1-209ENST00000586799 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
DNMT1-209ENST00000586799 CYP27B1O15528 508 aa16.58■□□□□ 0.24
DNMT1-209ENST00000586799 MMP10P09238 476 aa16.58■□□□□ 0.24
DNMT1-209ENST00000586799 LINC00116Q8NCU8 138 aa16.58■□□□□ 0.24
DNMT1-209ENST00000586799 PIGBQ92521 554 aa16.58■□□□□ 0.24
DNMT1-209ENST00000586799 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
DNMT1-209ENST00000586799 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
DNMT1-209ENST00000586799 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
DNMT1-209ENST00000586799 SIK1P57059 783 aa16.56■□□□□ 0.24
DNMT1-209ENST00000586799 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
DNMT1-209ENST00000586799 C9orf131Q5VYM1 1079 aa16.56■□□□□ 0.24
DNMT1-209ENST00000586799 GNPATO15228 680 aa16.55■□□□□ 0.24
DNMT1-209ENST00000586799 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
DNMT1-209ENST00000586799 FCHSD2O94868 740 aa16.54■□□□□ 0.24
DNMT1-209ENST00000586799 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
DNMT1-209ENST00000586799 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
DNMT1-209ENST00000586799 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
DNMT1-209ENST00000586799 DPEP1P16444 411 aa16.53■□□□□ 0.24
DNMT1-209ENST00000586799 ITPK1Q13572 414 aa16.53■□□□□ 0.24
DNMT1-209ENST00000586799 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms