RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.54	■■■□□ 2.16
CIRBP-208	ENST00000586548	ZBTB7C	A1YPR0	619 aa		28.54	■■■□□ 2.16
CIRBP-208	ENST00000586548	RGPD2	P0DJD1	1756 aa		28.53	■■■□□ 2.16
CIRBP-208	ENST00000586548	TRIM27	P14373	513 aa		28.53	■■■□□ 2.16
CIRBP-208	ENST00000586548	TWISTNB	Q3B726	338 aa	Predicted RBP	28.53	■■■□□ 2.16
CIRBP-208	ENST00000586548	TSPYL6	Q8N831	410 aa		28.53	■■■□□ 2.16
CIRBP-208	ENST00000586548	RBM19	Q9Y4C8	960 aa	Known RBP	28.53	■■■□□ 2.16
CIRBP-208	ENST00000586548	MVP	Q14764	893 aa	Known RBP	28.52	■■■□□ 2.16
CIRBP-208	ENST00000586548	NOB1	Q9ULX3	412 aa	Known RBP	28.52	■■■□□ 2.16
CIRBP-208	ENST00000586548	CAMTA1	Q9Y6Y1	1673 aa		28.52	■■■□□ 2.16
CIRBP-208	ENST00000586548	NCAPD2	Q15021	1401 aa		28.52	■■■□□ 2.16
CIRBP-208	ENST00000586548	KIAA0232	Q92628	1395 aa		28.51	■■■□□ 2.15
CIRBP-208	ENST00000586548	NBPF6	Q5VWK0	638 aa		28.51	■■■□□ 2.15
CIRBP-208	ENST00000586548	C8orf58	Q8NAV2	365 aa		28.51	■■■□□ 2.15
CIRBP-208	ENST00000586548	NBPF4	Q96M43	638 aa		28.51	■■■□□ 2.15
CIRBP-208	ENST00000586548	DDX17	Q92841	729 aa	Known RBP	28.5	■■■□□ 2.15
CIRBP-208	ENST00000586548	GNAT3	A8MTJ3	354 aa		28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	TCERG1	O14776	1098 aa	Known RBP	28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	HAP1	P54257	671 aa	Predicted RBP	28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	USHBP1	Q8N6Y0	703 aa		28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	MAP3K5	Q99683	1374 aa		28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	MRPL50	Q8N5N7	158 aa	Known RBP	28.49	■■■□□ 2.15
CIRBP-208	ENST00000586548	CRYBG1	Q9Y4K1	1723 aa		28.47	■■■□□ 2.15
CIRBP-208	ENST00000586548	BRINP3	Q76B58	766 aa		28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	SPATA31A3	Q5VYP0	1347 aa		28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	ELL2	O00472	640 aa	Predicted RBP	28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	PLEKHG5	O94827	1062 aa		28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	ANKRD24	Q8TF21	1146 aa		28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	ARHGAP45	Q92619	1136 aa		28.46	■■■□□ 2.15
CIRBP-208	ENST00000586548	RGPD5	Q99666	1765 aa		28.45	■■■□□ 2.15
CIRBP-208	ENST00000586548	ABCC6	O95255	1503 aa		28.45	■■■□□ 2.15
CIRBP-208	ENST00000586548	DDX19B	Q9UMR2	479 aa		28.44	■■■□□ 2.14
CIRBP-208	ENST00000586548	LRRC59	Q96AG4	307 aa	Known RBP	28.43	■■■□□ 2.14
CIRBP-208	ENST00000586548	LMO7	Q8WWI1	1683 aa		28.42	■■■□□ 2.14
CIRBP-208	ENST00000586548	COL18A1	P39060	1754 aa		28.42	■■■□□ 2.14
CIRBP-208	ENST00000586548	SLAIN2	Q9P270	581 aa		28.41	■■■□□ 2.14
CIRBP-208	ENST00000586548	AXIN2	Q9Y2T1	843 aa		28.41	■■■□□ 2.14
CIRBP-208	ENST00000586548	TSPYL4	Q9UJ04	414 aa		28.4	■■■□□ 2.14
CIRBP-208	ENST00000586548	ZC3H6	P61129	1189 aa	Known RBP	28.4	■■■□□ 2.14
CIRBP-208	ENST00000586548	ITPRIP	Q8IWB1	547 aa		28.4	■■■□□ 2.14
CIRBP-208	ENST00000586548	TMEM57	Q8N5G2	664 aa		28.4	■■■□□ 2.14
CIRBP-208	ENST00000586548	BABAM1	Q9NWV8	329 aa		28.4	■■■□□ 2.14
CIRBP-208	ENST00000586548	ERBB3	P21860	1342 aa		28.39	■■■□□ 2.14
CIRBP-208	ENST00000586548	IGHD	P01880	384 aa		28.39	■■■□□ 2.14
CIRBP-208	ENST00000586548	IL17RE	Q8NFR9	667 aa		28.38	■■■□□ 2.13
CIRBP-208	ENST00000586548	PCDHB15	Q9Y5E8	787 aa		28.38	■■■□□ 2.13
CIRBP-208	ENST00000586548	AMOT	Q4VCS5	1084 aa		28.37	■■■□□ 2.13
CIRBP-208	ENST00000586548	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.37	■■■□□ 2.13
CIRBP-208	ENST00000586548	FAM208A	Q9UK61	1670 aa	Known RBP	28.37	■■■□□ 2.13
CIRBP-208	ENST00000586548	CEMIP	Q8WUJ3	1361 aa		28.36	■■■□□ 2.13
CIRBP-208	ENST00000586548	KRT24	Q2M2I5	525 aa		28.36	■■■□□ 2.13
CIRBP-208	ENST00000586548	SOS2	Q07890	1332 aa	Predicted RBP	28.36	■■■□□ 2.13
CIRBP-208	ENST00000586548	CPD	O75976	1380 aa		28.35	■■■□□ 2.13
CIRBP-208	ENST00000586548	API5	Q9BZZ5	524 aa	Known RBP	28.35	■■■□□ 2.13
CIRBP-208	ENST00000586548	MIS18A	Q9NYP9	233 aa		28.35	■■■□□ 2.13
CIRBP-208	ENST00000586548	ABCC4	O15439	1325 aa		28.34	■■■□□ 2.13
CIRBP-208	ENST00000586548	TAF7	Q15545	349 aa	Predicted RBP	28.33	■■■□□ 2.13
CIRBP-208	ENST00000586548	AKAP4	Q5JQC9	854 aa		28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	CABLES1	Q8TDN4	633 aa		28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	NHSL1	Q5SYE7	1610 aa		28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	CHMP4B	Q9H444	224 aa	Known RBP	28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	RWDD1	Q9H446	243 aa	Predicted RBP	28.32	■■■□□ 2.12
CIRBP-208	ENST00000586548	SOS1	Q07889	1333 aa	Predicted RBP	28.31	■■■□□ 2.12
CIRBP-208	ENST00000586548	ZBTB40	Q9NUA8	1239 aa		28.3	■■■□□ 2.12
CIRBP-208	ENST00000586548	OVOS2	A0A0G2JMS6	1433 aa		28.3	■■■□□ 2.12
CIRBP-208	ENST00000586548	SKAP1	Q86WV1	359 aa		28.29	■■■□□ 2.12
CIRBP-208	ENST00000586548	PLEKHG2	Q9H7P9	1386 aa		28.28	■■■□□ 2.12
CIRBP-208	ENST00000586548	VIRMA	Q69YN4	1812 aa	Known RBP	28.28	■■■□□ 2.12
CIRBP-208	ENST00000586548	KDM3B	Q7LBC6	1761 aa		28.27	■■■□□ 2.12
CIRBP-208	ENST00000586548	PTPRC	P08575	1304 aa		28.26	■■■□□ 2.12
CIRBP-208	ENST00000586548	C1orf141	Q5JVX7	400 aa		28.26	■■■□□ 2.11
CIRBP-208	ENST00000586548	ABCA3	Q99758	1704 aa		28.26	■■■□□ 2.11
CIRBP-208	ENST00000586548	HDAC1	Q13547	482 aa	Predicted RBP	28.25	■■■□□ 2.11
CIRBP-208	ENST00000586548	NLRP2	Q9NX02	1062 aa		28.24	■■■□□ 2.11
CIRBP-208	ENST00000586548	RGS12	O14924	1447 aa		28.24	■■■□□ 2.11
CIRBP-208	ENST00000586548	ADAMTS7	Q9UKP4	1686 aa		28.23	■■■□□ 2.11
CIRBP-208	ENST00000586548	ZBTB7B	O15156	539 aa	Predicted RBP	28.23	■■■□□ 2.11
CIRBP-208	ENST00000586548	LGR6	Q9HBX8	967 aa		28.23	■■■□□ 2.11
CIRBP-208	ENST00000586548	CACNA1F	O60840	1977 aa		28.22	■■■□□ 2.11
CIRBP-208	ENST00000586548	PDE4A	P27815	886 aa		28.22	■■■□□ 2.11
CIRBP-208	ENST00000586548	CHRNA2	Q15822	529 aa		28.22	■■■□□ 2.11
CIRBP-208	ENST00000586548	RAPGEF4	Q8WZA2	1011 aa		28.22	■■■□□ 2.11
CIRBP-208	ENST00000586548	RNMT	O43148	476 aa	Known RBP	28.21	■■■□□ 2.11
CIRBP-208	ENST00000586548	BACH2	Q9BYV9	841 aa		28.21	■■■□□ 2.11
CIRBP-208	ENST00000586548	SLC4A2	P04920	1241 aa		28.2	■■■□□ 2.1
CIRBP-208	ENST00000586548	CSB-PGBD3	P0DP91	1061 aa		28.2	■■■□□ 2.1
CIRBP-208	ENST00000586548	TEF	Q10587	303 aa		28.2	■■■□□ 2.1
CIRBP-208	ENST00000586548	CCDC30	Q5VVM6	783 aa		28.19	■■■□□ 2.1
CIRBP-208	ENST00000586548	INTS3	Q68E01	1043 aa	Known RBP	28.19	■■■□□ 2.1
CIRBP-208	ENST00000586548	TAT	P17735	454 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-208	ENST00000586548	RGS3	P49796	1198 aa		28.18	■■■□□ 2.1
CIRBP-208	ENST00000586548	MPRIP	Q6WCQ1	1025 aa		28.18	■■■□□ 2.1
CIRBP-208	ENST00000586548	STK31	Q9BXU1	1019 aa		28.18	■■■□□ 2.1
CIRBP-208	ENST00000586548	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.18	■■■□□ 2.1	4e-13	■□□□□ 8.8
CIRBP-208	ENST00000586548	SIPA1L3	O60292	1781 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-208	ENST00000586548	MEGF6	O75095	1541 aa		28.17	■■■□□ 2.1
CIRBP-208	ENST00000586548	PKD1L3	Q7Z443	1732 aa		28.16	■■■□□ 2.1
CIRBP-208	ENST00000586548	PRDM11	Q9NQV5	511 aa		28.16	■■■□□ 2.1
CIRBP-208	ENST00000586548	HOXB7	P09629	217 aa		28.15	■■■□□ 2.1

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