RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ZNF335Q9H4Z2 1342 aaPredicted RBP28.54■■■□□ 2.16
CIRBP-208ENST00000586548 ZBTB7CA1YPR0 619 aa28.54■■■□□ 2.16
CIRBP-208ENST00000586548 RGPD2P0DJD1 1756 aa28.53■■■□□ 2.16
CIRBP-208ENST00000586548 TRIM27P14373 513 aa28.53■■■□□ 2.16
CIRBP-208ENST00000586548 TWISTNBQ3B726 338 aaPredicted RBP28.53■■■□□ 2.16
CIRBP-208ENST00000586548 TSPYL6Q8N831 410 aa28.53■■■□□ 2.16
CIRBP-208ENST00000586548 RBM19Q9Y4C8 960 aaKnown RBP28.53■■■□□ 2.16
CIRBP-208ENST00000586548 MVPQ14764 893 aaKnown RBP28.52■■■□□ 2.16
CIRBP-208ENST00000586548 NOB1Q9ULX3 412 aaKnown RBP28.52■■■□□ 2.16
CIRBP-208ENST00000586548 CAMTA1Q9Y6Y1 1673 aa28.52■■■□□ 2.16
CIRBP-208ENST00000586548 NCAPD2Q15021 1401 aa28.52■■■□□ 2.16
CIRBP-208ENST00000586548 KIAA0232Q92628 1395 aa28.51■■■□□ 2.15
CIRBP-208ENST00000586548 NBPF6Q5VWK0 638 aa28.51■■■□□ 2.15
CIRBP-208ENST00000586548 C8orf58Q8NAV2 365 aa28.51■■■□□ 2.15
CIRBP-208ENST00000586548 NBPF4Q96M43 638 aa28.51■■■□□ 2.15
CIRBP-208ENST00000586548 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
CIRBP-208ENST00000586548 GNAT3A8MTJ3 354 aa28.49■■■□□ 2.15
CIRBP-208ENST00000586548 TCERG1O14776 1098 aaKnown RBP28.49■■■□□ 2.15
CIRBP-208ENST00000586548 HAP1P54257 671 aaPredicted RBP28.49■■■□□ 2.15
CIRBP-208ENST00000586548 USHBP1Q8N6Y0 703 aa28.49■■■□□ 2.15
CIRBP-208ENST00000586548 MAP3K5Q99683 1374 aa28.49■■■□□ 2.15
CIRBP-208ENST00000586548 MRPL50Q8N5N7 158 aaKnown RBP28.49■■■□□ 2.15
CIRBP-208ENST00000586548 CRYBG1Q9Y4K1 1723 aa28.47■■■□□ 2.15
CIRBP-208ENST00000586548 BRINP3Q76B58 766 aa28.46■■■□□ 2.15
CIRBP-208ENST00000586548 SPATA31A3Q5VYP0 1347 aa28.46■■■□□ 2.15
CIRBP-208ENST00000586548 ELL2O00472 640 aaPredicted RBP28.46■■■□□ 2.15
CIRBP-208ENST00000586548 PLEKHG5O94827 1062 aa28.46■■■□□ 2.15
CIRBP-208ENST00000586548 ANKRD24Q8TF21 1146 aa28.46■■■□□ 2.15
CIRBP-208ENST00000586548 ARHGAP45Q92619 1136 aa28.46■■■□□ 2.15
CIRBP-208ENST00000586548 RGPD5Q99666 1765 aa28.45■■■□□ 2.15
CIRBP-208ENST00000586548 ABCC6O95255 1503 aa28.45■■■□□ 2.15
CIRBP-208ENST00000586548 DDX19BQ9UMR2 479 aa28.44■■■□□ 2.14
CIRBP-208ENST00000586548 LRRC59Q96AG4 307 aaKnown RBP28.43■■■□□ 2.14
CIRBP-208ENST00000586548 LMO7Q8WWI1 1683 aa28.42■■■□□ 2.14
CIRBP-208ENST00000586548 COL18A1P39060 1754 aa28.42■■■□□ 2.14
CIRBP-208ENST00000586548 SLAIN2Q9P270 581 aa28.41■■■□□ 2.14
CIRBP-208ENST00000586548 AXIN2Q9Y2T1 843 aa28.41■■■□□ 2.14
CIRBP-208ENST00000586548 TSPYL4Q9UJ04 414 aa28.4■■■□□ 2.14
CIRBP-208ENST00000586548 ZC3H6P61129 1189 aaKnown RBP28.4■■■□□ 2.14
CIRBP-208ENST00000586548 ITPRIPQ8IWB1 547 aa28.4■■■□□ 2.14
CIRBP-208ENST00000586548 TMEM57Q8N5G2 664 aa28.4■■■□□ 2.14
CIRBP-208ENST00000586548 BABAM1Q9NWV8 329 aa28.4■■■□□ 2.14
CIRBP-208ENST00000586548 ERBB3P21860 1342 aa28.39■■■□□ 2.14
CIRBP-208ENST00000586548 IGHDP01880 384 aa28.39■■■□□ 2.14
CIRBP-208ENST00000586548 IL17REQ8NFR9 667 aa28.38■■■□□ 2.13
CIRBP-208ENST00000586548 PCDHB15Q9Y5E8 787 aa28.38■■■□□ 2.13
CIRBP-208ENST00000586548 AMOTQ4VCS5 1084 aa28.37■■■□□ 2.13
CIRBP-208ENST00000586548 PLEKHO1Q53GL0 409 aaPredicted RBP28.37■■■□□ 2.13
CIRBP-208ENST00000586548 FAM208AQ9UK61 1670 aaKnown RBP28.37■■■□□ 2.13
CIRBP-208ENST00000586548 CEMIPQ8WUJ3 1361 aa28.36■■■□□ 2.13
CIRBP-208ENST00000586548 KRT24Q2M2I5 525 aa28.36■■■□□ 2.13
CIRBP-208ENST00000586548 SOS2Q07890 1332 aaPredicted RBP28.36■■■□□ 2.13
CIRBP-208ENST00000586548 CPDO75976 1380 aa28.35■■■□□ 2.13
CIRBP-208ENST00000586548 API5Q9BZZ5 524 aaKnown RBP28.35■■■□□ 2.13
CIRBP-208ENST00000586548 MIS18AQ9NYP9 233 aa28.35■■■□□ 2.13
CIRBP-208ENST00000586548 ABCC4O15439 1325 aa28.34■■■□□ 2.13
CIRBP-208ENST00000586548 TAF7Q15545 349 aaPredicted RBP28.33■■■□□ 2.13
CIRBP-208ENST00000586548 AKAP4Q5JQC9 854 aa28.32■■■□□ 2.12
CIRBP-208ENST00000586548 CABLES1Q8TDN4 633 aa28.32■■■□□ 2.12
CIRBP-208ENST00000586548 NHSL1Q5SYE7 1610 aa28.32■■■□□ 2.12
CIRBP-208ENST00000586548 ZNF530Q6P9A1 599 aaPredicted RBP28.32■■■□□ 2.12
CIRBP-208ENST00000586548 CHMP4BQ9H444 224 aaKnown RBP28.32■■■□□ 2.12
CIRBP-208ENST00000586548 RWDD1Q9H446 243 aaPredicted RBP28.32■■■□□ 2.12
CIRBP-208ENST00000586548 SOS1Q07889 1333 aaPredicted RBP28.31■■■□□ 2.12
CIRBP-208ENST00000586548 ZBTB40Q9NUA8 1239 aa28.3■■■□□ 2.12
CIRBP-208ENST00000586548 OVOS2A0A0G2JMS6 1433 aa28.3■■■□□ 2.12
CIRBP-208ENST00000586548 SKAP1Q86WV1 359 aa28.29■■■□□ 2.12
CIRBP-208ENST00000586548 PLEKHG2Q9H7P9 1386 aa28.28■■■□□ 2.12
CIRBP-208ENST00000586548 VIRMAQ69YN4 1812 aaKnown RBP28.28■■■□□ 2.12
CIRBP-208ENST00000586548 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
CIRBP-208ENST00000586548 PTPRCP08575 1304 aa28.26■■■□□ 2.12
CIRBP-208ENST00000586548 C1orf141Q5JVX7 400 aa28.26■■■□□ 2.11
CIRBP-208ENST00000586548 ABCA3Q99758 1704 aa28.26■■■□□ 2.11
CIRBP-208ENST00000586548 HDAC1Q13547 482 aaPredicted RBP28.25■■■□□ 2.11
CIRBP-208ENST00000586548 NLRP2Q9NX02 1062 aa28.24■■■□□ 2.11
CIRBP-208ENST00000586548 RGS12O14924 1447 aa28.24■■■□□ 2.11
CIRBP-208ENST00000586548 ADAMTS7Q9UKP4 1686 aa28.23■■■□□ 2.11
CIRBP-208ENST00000586548 ZBTB7BO15156 539 aaPredicted RBP28.23■■■□□ 2.11
CIRBP-208ENST00000586548 LGR6Q9HBX8 967 aa28.23■■■□□ 2.11
CIRBP-208ENST00000586548 CACNA1FO60840 1977 aa28.22■■■□□ 2.11
CIRBP-208ENST00000586548 PDE4AP27815 886 aa28.22■■■□□ 2.11
CIRBP-208ENST00000586548 CHRNA2Q15822 529 aa28.22■■■□□ 2.11
CIRBP-208ENST00000586548 RAPGEF4Q8WZA2 1011 aa28.22■■■□□ 2.11
CIRBP-208ENST00000586548 RNMTO43148 476 aaKnown RBP28.21■■■□□ 2.11
CIRBP-208ENST00000586548 BACH2Q9BYV9 841 aa28.21■■■□□ 2.11
CIRBP-208ENST00000586548 SLC4A2P04920 1241 aa28.2■■■□□ 2.1
CIRBP-208ENST00000586548 CSB-PGBD3P0DP91 1061 aa28.2■■■□□ 2.1
CIRBP-208ENST00000586548 TEFQ10587 303 aa28.2■■■□□ 2.1
CIRBP-208ENST00000586548 CCDC30Q5VVM6 783 aa28.19■■■□□ 2.1
CIRBP-208ENST00000586548 INTS3Q68E01 1043 aaKnown RBP28.19■■■□□ 2.1
CIRBP-208ENST00000586548 TATP17735 454 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-208ENST00000586548 RGS3P49796 1198 aa28.18■■■□□ 2.1
CIRBP-208ENST00000586548 MPRIPQ6WCQ1 1025 aa28.18■■■□□ 2.1
CIRBP-208ENST00000586548 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
CIRBP-208ENST00000586548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.18■■■□□ 2.14e-13■□□□□ 8.8
CIRBP-208ENST00000586548 SIPA1L3O60292 1781 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-208ENST00000586548 MEGF6O75095 1541 aa28.17■■■□□ 2.1
CIRBP-208ENST00000586548 PKD1L3Q7Z443 1732 aa28.16■■■□□ 2.1
CIRBP-208ENST00000586548 PRDM11Q9NQV5 511 aa28.16■■■□□ 2.1
CIRBP-208ENST00000586548 HOXB7P09629 217 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms