RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 PROM2Q8N271 834 aa26.1■■□□□ 1.77
TPM4-204ENST00000586499 RAPGEF4Q8WZA2 1011 aa26.1■■□□□ 1.77
TPM4-204ENST00000586499 NSD2O96028 1365 aa26.09■■□□□ 1.77
TPM4-204ENST00000586499 TATP17735 454 aaPredicted RBP26.08■■□□□ 1.77
TPM4-204ENST00000586499 AMER1Q5JTC6 1135 aaPredicted RBP26.08■■□□□ 1.77
TPM4-204ENST00000586499 NHSQ6T4R5 1651 aa26.08■■□□□ 1.77
TPM4-204ENST00000586499 SHANK3Q9BYB0 1731 aa26.08■■□□□ 1.76
TPM4-204ENST00000586499 EYA1Q99502 592 aa26.07■■□□□ 1.76
TPM4-204ENST00000586499 PER1O15534 1290 aaPredicted RBP26.06■■□□□ 1.76
TPM4-204ENST00000586499 KAT6BQ8WYB5 2073 aa26.05■■□□□ 1.76
TPM4-204ENST00000586499 EIF4A2Q14240 407 aaKnown RBP26.05■■□□□ 1.76
TPM4-204ENST00000586499 RGPD3A6NKT7 1758 aaPredicted RBP26.05■■□□□ 1.76
TPM4-204ENST00000586499 RGPD4Q7Z3J3 1758 aa26.05■■□□□ 1.76
TPM4-204ENST00000586499 TXNRD1Q16881 649 aa26.04■■□□□ 1.76
TPM4-204ENST00000586499 NBPF14Q5TI25 921 aa26.04■■□□□ 1.76
TPM4-204ENST00000586499 PRIM1P49642 420 aaKnown RBP26.02■■□□□ 1.76
TPM4-204ENST00000586499 NCAPD2Q15021 1401 aa26.02■■□□□ 1.76
TPM4-204ENST00000586499 SYTL4Q96C24 671 aaPredicted RBP26.01■■□□□ 1.75
TPM4-204ENST00000586499 BTAF1O14981 1849 aa26■■□□□ 1.75
TPM4-204ENST00000586499 CC2D1BQ5T0F9 858 aaKnown RBP26■■□□□ 1.75
TPM4-204ENST00000586499 ANO8Q9HCE9 1232 aaPredicted RBP26■■□□□ 1.75
TPM4-204ENST00000586499 CNGB1Q14028 1251 aaPredicted RBP25.99■■□□□ 1.75
TPM4-204ENST00000586499 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
TPM4-204ENST00000586499 CYP27B1O15528 508 aa25.97■■□□□ 1.75
TPM4-204ENST00000586499 PCDH11XQ9BZA7 1347 aa25.96■■□□□ 1.75
TPM4-204ENST00000586499 PCDH11YQ9BZA8 1340 aa25.96■■□□□ 1.75
TPM4-204ENST00000586499 IGSF1Q8N6C5 1336 aa25.92■■□□□ 1.74
TPM4-204ENST00000586499 PKD1L3Q7Z443 1732 aa25.92■■□□□ 1.74
TPM4-204ENST00000586499 LRRC4BQ9NT99 713 aa25.92■■□□□ 1.74
TPM4-204ENST00000586499 SPG7Q9UQ90 795 aa25.92■■□□□ 1.74
TPM4-204ENST00000586499 MTHFSP49914 203 aa25.91■■□□□ 1.74
TPM4-204ENST00000586499 LRP5O75197 1615 aa25.91■■□□□ 1.74
TPM4-204ENST00000586499 PDGFDQ9GZP0 370 aaPredicted RBP25.9■■□□□ 1.74
TPM4-204ENST00000586499 KCNQ4P56696 695 aa25.89■■□□□ 1.74
TPM4-204ENST00000586499 STK32BQ9NY57 414 aa25.89■■□□□ 1.74
TPM4-204ENST00000586499 IL13P35225 146 aa25.88■■□□□ 1.73
TPM4-204ENST00000586499 SLC15A2Q16348 729 aa25.88■■□□□ 1.73
TPM4-204ENST00000586499 AEBP1Q8IUX7 1158 aa25.88■■□□□ 1.73
TPM4-204ENST00000586499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.88■■□□□ 1.732e-9■■□□□ 11.7
TPM4-204ENST00000586499 NPC1L1Q9UHC9 1359 aa25.86■■□□□ 1.73
TPM4-204ENST00000586499 NKX1-1Q15270 411 aaPredicted RBP25.86■■□□□ 1.73
TPM4-204ENST00000586499 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
TPM4-204ENST00000586499 TOGARAM1Q9Y4F4 1720 aa25.85■■□□□ 1.73
TPM4-204ENST00000586499 PHKG2P15735 406 aa25.85■■□□□ 1.73
TPM4-204ENST00000586499 ZNF827Q17R98 1081 aa25.84■■□□□ 1.73
TPM4-204ENST00000586499 SULT6B1Q6IMI4 303 aa25.84■■□□□ 1.73
TPM4-204ENST00000586499 IFNL2Q8IZJ0 200 aa25.83■■□□□ 1.73
TPM4-204ENST00000586499 PAPPAQ13219 1627 aa25.83■■□□□ 1.73
TPM4-204ENST00000586499 SLC27A3Q5K4L6 730 aa25.82■■□□□ 1.72
TPM4-204ENST00000586499 LY75O60449 1722 aa25.81■■□□□ 1.72
TPM4-204ENST00000586499 CASZ1Q86V15 1759 aa25.8■■□□□ 1.72
TPM4-204ENST00000586499 ITGB4P16144 1822 aa25.8■■□□□ 1.72
TPM4-204ENST00000586499 PLEKHO1Q53GL0 409 aaPredicted RBP25.8■■□□□ 1.72
TPM4-204ENST00000586499 PIGBQ92521 554 aa25.8■■□□□ 1.72
TPM4-204ENST00000586499 ZBTB7AO95365 584 aa25.79■■□□□ 1.72
TPM4-204ENST00000586499 SPON1Q9HCB6 807 aa25.79■■□□□ 1.72
TPM4-204ENST00000586499 CCNL1Q9UK58 526 aaPredicted RBP25.79■■□□□ 1.72
TPM4-204ENST00000586499 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
TPM4-204ENST00000586499 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
TPM4-204ENST00000586499 HMOX1P09601 288 aa25.77■■□□□ 1.72
TPM4-204ENST00000586499 KDRP35968 1356 aa25.77■■□□□ 1.72
TPM4-204ENST00000586499 ZNF530Q6P9A1 599 aaPredicted RBP25.76■■□□□ 1.71
TPM4-204ENST00000586499 ATF5Q9Y2D1 282 aaPredicted RBP25.76■■□□□ 1.71
TPM4-204ENST00000586499 PALLDQ8WX93 1383 aa25.76■■□□□ 1.71
TPM4-204ENST00000586499 PLEKHG2Q9H7P9 1386 aa25.76■■□□□ 1.71
TPM4-204ENST00000586499 AMOTQ4VCS5 1084 aa25.75■■□□□ 1.71
TPM4-204ENST00000586499 TMOD3Q9NYL9 352 aa25.74■■□□□ 1.71
TPM4-204ENST00000586499 ASAP1Q9ULH1 1129 aa25.72■■□□□ 1.71
TPM4-204ENST00000586499 COL3A1P02461 1466 aaPredicted RBP25.72■■□□□ 1.71
TPM4-204ENST00000586499 SMARCC1Q92922 1105 aaPredicted RBP25.71■■□□□ 1.71
TPM4-204ENST00000586499 TFCP2L1Q9NZI6 479 aa25.71■■□□□ 1.71
TPM4-204ENST00000586499 DCAF5Q96JK2 942 aa25.7■■□□□ 1.7
TPM4-204ENST00000586499 PPP1R1BQ9UD71 204 aaPredicted RBP25.7■■□□□ 1.7
TPM4-204ENST00000586499 KDM6AO15550 1401 aaPredicted RBP25.7■■□□□ 1.7
TPM4-204ENST00000586499 PNPLA7Q6ZV29 1317 aa25.69■■□□□ 1.7
TPM4-204ENST00000586499 HSP90AB1P08238 724 aaKnown RBP25.69■■□□□ 1.7
TPM4-204ENST00000586499 PTGER2P43116 358 aa25.69■■□□□ 1.7
TPM4-204ENST00000586499 C1orf141Q5JVX7 400 aa25.69■■□□□ 1.7
TPM4-204ENST00000586499 ERVV-2B6SEH9 535 aa25.68■■□□□ 1.7
TPM4-204ENST00000586499 U2SURPO15042 1029 aaKnown RBP25.68■■□□□ 1.7
TPM4-204ENST00000586499 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
TPM4-204ENST00000586499 MTFR1LQ9H019 292 aa25.68■■□□□ 1.7
TPM4-204ENST00000586499 ATG3Q9NT62 314 aa25.68■■□□□ 1.7
TPM4-204ENST00000586499 TUBGCP6Q96RT7 1819 aa25.66■■□□□ 1.7
TPM4-204ENST00000586499 C5P01031 1676 aa25.65■■□□□ 1.7
TPM4-204ENST00000586499 CABP4P57796 275 aa25.65■■□□□ 1.7
TPM4-204ENST00000586499 LOC102724428A0A0B4J2F2 783 aa25.64■■□□□ 1.7
TPM4-204ENST00000586499 SIK1P57059 783 aa25.64■■□□□ 1.7
TPM4-204ENST00000586499 MTHFSDQ2M296 383 aaKnown RBP25.64■■□□□ 1.7
TPM4-204ENST00000586499 TAF1LQ8IZX4 1826 aa25.63■■□□□ 1.69
TPM4-204ENST00000586499 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
TPM4-204ENST00000586499 SGIP1Q9BQI5 828 aa25.63■■□□□ 1.69
TPM4-204ENST00000586499 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
TPM4-204ENST00000586499 AKAP4Q5JQC9 854 aa25.62■■□□□ 1.69
TPM4-204ENST00000586499 NFATC2IPQ8NCF5 419 aa25.62■■□□□ 1.69
TPM4-204ENST00000586499 ITPK1Q13572 414 aa25.61■■□□□ 1.69
TPM4-204ENST00000586499 COL23A1Q86Y22 540 aaPredicted RBP25.61■■□□□ 1.69
TPM4-204ENST00000586499 LINC00116Q8NCU8 138 aa25.61■■□□□ 1.69
TPM4-204ENST00000586499 LGR6Q9HBX8 967 aa25.61■■□□□ 1.69
TPM4-204ENST00000586499 MSH5O43196 834 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms