RNA–Protein interactions for RNA: ENST00000586261.2

CDK3-203, Transcript of cyclin dependent kinase 3, humanhuman

TSL 5

Gene CDK3, Length 803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-203ENST00000586261 KCNQ4P56696 695 aa21.44■■□□□ 1.02
CDK3-203ENST00000586261 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
CDK3-203ENST00000586261 QSER1Q2KHR3 1735 aa21.43■■□□□ 1.02
CDK3-203ENST00000586261 SLC24A1O60721 1099 aa21.43■■□□□ 1.02
CDK3-203ENST00000586261 GPR162Q16538 588 aa21.43■■□□□ 1.02
CDK3-203ENST00000586261 PNPLA7Q6ZV29 1317 aa21.43■■□□□ 1.02
CDK3-203ENST00000586261 RGPD2P0DJD1 1756 aa21.43■■□□□ 1.02
CDK3-203ENST00000586261 MEGF6O75095 1541 aa21.4■■□□□ 1.02
CDK3-203ENST00000586261 SHANK3Q9BYB0 1731 aa21.4■■□□□ 1.02
CDK3-203ENST00000586261 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
CDK3-203ENST00000586261 RTL1A6NKG5 1358 aa21.39■■□□□ 1.02
CDK3-203ENST00000586261 NSD2O96028 1365 aa21.39■■□□□ 1.02
CDK3-203ENST00000586261 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.02
CDK3-203ENST00000586261 LY75O60449 1722 aa21.39■■□□□ 1.01
CDK3-203ENST00000586261 RRS1Q15050 365 aaKnown RBP21.39■■□□□ 1.01
CDK3-203ENST00000586261 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
CDK3-203ENST00000586261 CCNL1Q9UK58 526 aaPredicted RBP21.39■■□□□ 1.01
CDK3-203ENST00000586261 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
CDK3-203ENST00000586261 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
CDK3-203ENST00000586261 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
CDK3-203ENST00000586261 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
CDK3-203ENST00000586261 SMG6Q86US8 1419 aaKnown RBP21.37■■□□□ 1.01
CDK3-203ENST00000586261 USP47Q96K76 1375 aa21.36■■□□□ 1.01
CDK3-203ENST00000586261 COL24A1Q17RW2 1714 aa21.36■■□□□ 1.01
CDK3-203ENST00000586261 MSH5O43196 834 aa21.36■■□□□ 1.01
CDK3-203ENST00000586261 RAPGEF4Q8WZA2 1011 aa21.36■■□□□ 1.01
CDK3-203ENST00000586261 CGNL1Q0VF96 1302 aa21.35■■□□□ 1.01
CDK3-203ENST00000586261 FYB1O15117 783 aa21.35■■□□□ 1.01
CDK3-203ENST00000586261 TMF1P82094 1093 aa21.34■■□□□ 1.01
CDK3-203ENST00000586261 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
CDK3-203ENST00000586261 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
CDK3-203ENST00000586261 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
CDK3-203ENST00000586261 C1QTNF8P60827 252 aa21.31■■□□□ 1
CDK3-203ENST00000586261 COL23A1Q86Y22 540 aaPredicted RBP21.31■■□□□ 1
CDK3-203ENST00000586261 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
CDK3-203ENST00000586261 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
CDK3-203ENST00000586261 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
CDK3-203ENST00000586261 INSRP06213 1382 aa21.29■■□□□ 1
CDK3-203ENST00000586261 FLT4P35916 1363 aa21.28■■□□□ 1
CDK3-203ENST00000586261 KIF20BQ96Q89 1820 aa21.28■■□□□ 1
CDK3-203ENST00000586261 MSL1Q68DK7 614 aa21.28■■□□□ 1
CDK3-203ENST00000586261 CDCA8Q53HL2 280 aa21.27■■□□□ 1
CDK3-203ENST00000586261 C5P01031 1676 aa21.27■■□□□ 1
CDK3-203ENST00000586261 HMGB2P26583 209 aaKnown RBP21.26■□□□□ 0.99
CDK3-203ENST00000586261 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
CDK3-203ENST00000586261 KIF24Q5T7B8 1368 aa21.25■□□□□ 0.99
CDK3-203ENST00000586261 PALLDQ8WX93 1383 aa21.25■□□□□ 0.99
CDK3-203ENST00000586261 GRIN3BO60391 1043 aa21.25■□□□□ 0.99
CDK3-203ENST00000586261 GIGYF1O75420 1035 aaPredicted RBP21.25■□□□□ 0.99
CDK3-203ENST00000586261 YBX3P16989 372 aaKnown RBP eCLIP21.24■□□□□ 0.99
CDK3-203ENST00000586261 CYP27B1O15528 508 aa21.23■□□□□ 0.99
CDK3-203ENST00000586261 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
CDK3-203ENST00000586261 TAF1LQ8IZX4 1826 aa21.21■□□□□ 0.99
CDK3-203ENST00000586261 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
CDK3-203ENST00000586261 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
CDK3-203ENST00000586261 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
CDK3-203ENST00000586261 AK7Q96M32 723 aa21.2■□□□□ 0.98
CDK3-203ENST00000586261 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
CDK3-203ENST00000586261 TOGARAM1Q9Y4F4 1720 aa21.19■□□□□ 0.98
CDK3-203ENST00000586261 CARD14Q9BXL6 1004 aa21.19■□□□□ 0.98
CDK3-203ENST00000586261 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
CDK3-203ENST00000586261 ITGB4P16144 1822 aa21.19■□□□□ 0.98
CDK3-203ENST00000586261 C4BP0C0L5 1744 aa21.18■□□□□ 0.98
CDK3-203ENST00000586261 PKD1L3Q7Z443 1732 aa21.18■□□□□ 0.98
CDK3-203ENST00000586261 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
CDK3-203ENST00000586261 PHF14O94880 888 aa21.16■□□□□ 0.98
CDK3-203ENST00000586261 PIGBQ92521 554 aa21.16■□□□□ 0.98
CDK3-203ENST00000586261 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
CDK3-203ENST00000586261 NCAPD2Q15021 1401 aa21.13■□□□□ 0.97
CDK3-203ENST00000586261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
CDK3-203ENST00000586261 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
CDK3-203ENST00000586261 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 UBR3Q6ZT12 1888 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 EYA1Q99502 592 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
CDK3-203ENST00000586261 LOC102724428A0A0B4J2F2 783 aa21.11■□□□□ 0.97
CDK3-203ENST00000586261 SIK1P57059 783 aa21.11■□□□□ 0.97
CDK3-203ENST00000586261 CEP350Q5VT06 3117 aa21.11■□□□□ 0.97
CDK3-203ENST00000586261 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
CDK3-203ENST00000586261 SSFA2P28290 1259 aa21.1■□□□□ 0.97
CDK3-203ENST00000586261 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
CDK3-203ENST00000586261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
CDK3-203ENST00000586261 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
CDK3-203ENST00000586261 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.97
CDK3-203ENST00000586261 IFNL2Q8IZJ0 200 aa21.08■□□□□ 0.97
CDK3-203ENST00000586261 GPBP1L1Q9HC44 474 aaPredicted RBP21.08■□□□□ 0.97
CDK3-203ENST00000586261 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.97
CDK3-203ENST00000586261 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
CDK3-203ENST00000586261 GNPATO15228 680 aa21.07■□□□□ 0.96
CDK3-203ENST00000586261 PHKG2P15735 406 aa21.07■□□□□ 0.96
CDK3-203ENST00000586261 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
CDK3-203ENST00000586261 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
CDK3-203ENST00000586261 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
CDK3-203ENST00000586261 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
CDK3-203ENST00000586261 ITPK1Q13572 414 aa21.05■□□□□ 0.96
CDK3-203ENST00000586261 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
CDK3-203ENST00000586261 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms