RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TATP17735 454 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-209ENST00000586122 ZCRB1Q8TBF4 217 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-209ENST00000586122 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-209ENST00000586122 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
SMARCA4-209ENST00000586122 NUP188Q5SRE5 1749 aa14.17□□□□□ -0.14
SMARCA4-209ENST00000586122 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
SMARCA4-209ENST00000586122 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 USHBP1Q8N6Y0 703 aa14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 BTAF1O14981 1849 aa14.15□□□□□ -0.14
SMARCA4-209ENST00000586122 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-209ENST00000586122 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
SMARCA4-209ENST00000586122 EYA1Q99502 592 aa14.14□□□□□ -0.15
SMARCA4-209ENST00000586122 DOT1LQ8TEK3 1739 aa14.14□□□□□ -0.15
SMARCA4-209ENST00000586122 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
SMARCA4-209ENST00000586122 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
SMARCA4-209ENST00000586122 KCNQ2O43526 872 aa14.11□□□□□ -0.15
SMARCA4-209ENST00000586122 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-209ENST00000586122 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
SMARCA4-209ENST00000586122 ACSBG1Q96GR2 724 aa14.1□□□□□ -0.15
SMARCA4-209ENST00000586122 LRP5O75197 1615 aa14.09□□□□□ -0.15
SMARCA4-209ENST00000586122 HMGB2P26583 209 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-209ENST00000586122 MTHFSP49914 203 aa14.09□□□□□ -0.15
SMARCA4-209ENST00000586122 TXNRD1Q16881 649 aa14.09□□□□□ -0.15
SMARCA4-209ENST00000586122 ZEB1P37275 1124 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-209ENST00000586122 KDRP35968 1356 aa14.08□□□□□ -0.16
SMARCA4-209ENST00000586122 LY75O60449 1722 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 CYP27B1O15528 508 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 IL13P35225 146 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 R3HDM1Q15032 1099 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 SLC27A3Q5K4L6 730 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
SMARCA4-209ENST00000586122 ITGB4P16144 1822 aa14.06□□□□□ -0.16
SMARCA4-209ENST00000586122 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-209ENST00000586122 PROM2Q8N271 834 aa14.06□□□□□ -0.16
SMARCA4-209ENST00000586122 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-209ENST00000586122 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-209ENST00000586122 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-209ENST00000586122 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
SMARCA4-209ENST00000586122 TOGARAM1Q9Y4F4 1720 aa14.04□□□□□ -0.16
SMARCA4-209ENST00000586122 PHKG2P15735 406 aa14.04□□□□□ -0.16
SMARCA4-209ENST00000586122 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
SMARCA4-209ENST00000586122 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
SMARCA4-209ENST00000586122 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
SMARCA4-209ENST00000586122 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-209ENST00000586122 QSER1Q2KHR3 1735 aa14.02□□□□□ -0.16
SMARCA4-209ENST00000586122 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-209ENST00000586122 SLC15A2Q16348 729 aa14.01□□□□□ -0.17
SMARCA4-209ENST00000586122 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
SMARCA4-209ENST00000586122 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
SMARCA4-209ENST00000586122 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-209ENST00000586122 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
SMARCA4-209ENST00000586122 ERVV-2B6SEH9 535 aa14□□□□□ -0.17
SMARCA4-209ENST00000586122 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
SMARCA4-209ENST00000586122 ZNF530Q6P9A1 599 aaPredicted RBP14□□□□□ -0.17
SMARCA4-209ENST00000586122 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
SMARCA4-209ENST00000586122 TMOD3Q9NYL9 352 aa14□□□□□ -0.17
SMARCA4-209ENST00000586122 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
SMARCA4-209ENST00000586122 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 PPP2R1AP30153 589 aa13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 SCN11AQ9UI33 1791 aa13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 C5P01031 1676 aa13.98□□□□□ -0.17
SMARCA4-209ENST00000586122 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
SMARCA4-209ENST00000586122 PIGBQ92521 554 aa13.97□□□□□ -0.17
SMARCA4-209ENST00000586122 SPON1Q9HCB6 807 aa13.97□□□□□ -0.17
SMARCA4-209ENST00000586122 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.17
SMARCA4-209ENST00000586122 AKAP4Q5JQC9 854 aa13.96□□□□□ -0.17
SMARCA4-209ENST00000586122 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
SMARCA4-209ENST00000586122 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-209ENST00000586122 KDM6AO15550 1401 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-209ENST00000586122 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-209ENST00000586122 HMOX1P09601 288 aa13.95□□□□□ -0.18
SMARCA4-209ENST00000586122 RALBP1Q15311 655 aa13.94□□□□□ -0.18
SMARCA4-209ENST00000586122 GAS2L2Q8NHY3 880 aa13.94□□□□□ -0.18
SMARCA4-209ENST00000586122 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
SMARCA4-209ENST00000586122 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
SMARCA4-209ENST00000586122 ADAMTS7Q9UKP4 1686 aa13.94□□□□□ -0.18
SMARCA4-209ENST00000586122 SRCAPQ6ZRS2 3230 aa13.93□□□□□ -0.18
SMARCA4-209ENST00000586122 CABP4P57796 275 aa13.93□□□□□ -0.18
SMARCA4-209ENST00000586122 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
SMARCA4-209ENST00000586122 MTFR1LQ9H019 292 aa13.93□□□□□ -0.18
SMARCA4-209ENST00000586122 MRC1P22897 1456 aa13.93□□□□□ -0.18
SMARCA4-209ENST00000586122 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
SMARCA4-209ENST00000586122 SIK1P57059 783 aa13.92□□□□□ -0.18
SMARCA4-209ENST00000586122 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
SMARCA4-209ENST00000586122 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
SMARCA4-209ENST00000586122 C4BP0C0L5 1744 aa13.92□□□□□ -0.18
SMARCA4-209ENST00000586122 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SMARCA4-209ENST00000586122 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-209ENST00000586122 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-209ENST00000586122 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms