RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
MBD3-203ENST00000585903 SHANK3Q9BYB0 1731 aa14.81□□□□□ -0.04
MBD3-203ENST00000585903 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
MBD3-203ENST00000585903 LY75O60449 1722 aa14.8□□□□□ -0.04
MBD3-203ENST00000585903 FYB1O15117 783 aa14.8□□□□□ -0.04
MBD3-203ENST00000585903 AMPHP49418 695 aa14.8□□□□□ -0.04
MBD3-203ENST00000585903 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
MBD3-203ENST00000585903 FHDC1Q9C0D6 1143 aaPredicted RBP14.8□□□□□ -0.04
MBD3-203ENST00000585903 RGPD2P0DJD1 1756 aa14.79□□□□□ -0.04
MBD3-203ENST00000585903 SLC16A10Q8TF71 515 aa14.79□□□□□ -0.04
MBD3-203ENST00000585903 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
MBD3-203ENST00000585903 DOT1LQ8TEK3 1739 aa14.78□□□□□ -0.04
MBD3-203ENST00000585903 INSRP06213 1382 aa14.78□□□□□ -0.04
MBD3-203ENST00000585903 ZCRB1Q8TBF4 217 aaKnown RBP14.78□□□□□ -0.04
MBD3-203ENST00000585903 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
MBD3-203ENST00000585903 FLT4P35916 1363 aa14.77□□□□□ -0.04
MBD3-203ENST00000585903 ANKRD26Q9UPS8 1709 aa14.77□□□□□ -0.05
MBD3-203ENST00000585903 MEGF6O75095 1541 aa14.76□□□□□ -0.05
MBD3-203ENST00000585903 NSD2O96028 1365 aa14.76□□□□□ -0.05
MBD3-203ENST00000585903 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
MBD3-203ENST00000585903 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
MBD3-203ENST00000585903 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
MBD3-203ENST00000585903 LTV1Q96GA3 475 aaPredicted RBP14.75□□□□□ -0.05
MBD3-203ENST00000585903 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
MBD3-203ENST00000585903 NCAPD2Q15021 1401 aa14.75□□□□□ -0.05
MBD3-203ENST00000585903 PLEKHG2Q9H7P9 1386 aa14.74□□□□□ -0.05
MBD3-203ENST00000585903 RAPGEF4Q8WZA2 1011 aa14.74□□□□□ -0.05
MBD3-203ENST00000585903 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
MBD3-203ENST00000585903 PRIM1P49642 420 aaKnown RBP14.73□□□□□ -0.05
MBD3-203ENST00000585903 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 NBPF6Q5VWK0 638 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 NBPF4Q96M43 638 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 ARXQ96QS3 562 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 GGNBP2Q9H3C7 697 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
MBD3-203ENST00000585903 PKD1L3Q7Z443 1732 aa14.72□□□□□ -0.05
MBD3-203ENST00000585903 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
MBD3-203ENST00000585903 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
MBD3-203ENST00000585903 RRS1Q15050 365 aaKnown RBP14.72□□□□□ -0.05
MBD3-203ENST00000585903 TATP17735 454 aaPredicted RBP14.7□□□□□ -0.06
MBD3-203ENST00000585903 PNPLA7Q6ZV29 1317 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 NSD3Q9BZ95 1437 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 FBLN1P23142 703 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 POLD1P28340 1107 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
MBD3-203ENST00000585903 CARD14Q9BXL6 1004 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 TFCP2L1Q9NZI6 479 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
MBD3-203ENST00000585903 TAF1LQ8IZX4 1826 aa14.69□□□□□ -0.06
MBD3-203ENST00000585903 C5P01031 1676 aa14.68□□□□□ -0.06
MBD3-203ENST00000585903 HSP90AB2PQ58FF8 381 aa14.68□□□□□ -0.06
MBD3-203ENST00000585903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
MBD3-203ENST00000585903 WASHC2AQ641Q2 1341 aa14.67□□□□□ -0.06
MBD3-203ENST00000585903 ITGB4P16144 1822 aa14.67□□□□□ -0.06
MBD3-203ENST00000585903 CCNL1Q9UK58 526 aaPredicted RBP14.67□□□□□ -0.06
MBD3-203ENST00000585903 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
MBD3-203ENST00000585903 FLAD1Q8NFF5 587 aa14.66□□□□□ -0.06
MBD3-203ENST00000585903 GPR162Q16538 588 aa14.65□□□□□ -0.06
MBD3-203ENST00000585903 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
MBD3-203ENST00000585903 TOGARAM1Q9Y4F4 1720 aa14.64□□□□□ -0.07
MBD3-203ENST00000585903 USHBP1Q8N6Y0 703 aa14.64□□□□□ -0.07
MBD3-203ENST00000585903 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
MBD3-203ENST00000585903 CYP27B1O15528 508 aa14.63□□□□□ -0.07
MBD3-203ENST00000585903 SPG7Q9UQ90 795 aa14.63□□□□□ -0.07
MBD3-203ENST00000585903 EMILIN1Q9Y6C2 1016 aa14.63□□□□□ -0.07
MBD3-203ENST00000585903 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
MBD3-203ENST00000585903 ZNF831Q5JPB2 1677 aa14.61□□□□□ -0.07
MBD3-203ENST00000585903 UBR3Q6ZT12 1888 aa14.61□□□□□ -0.07
MBD3-203ENST00000585903 POLKQ9UBT6 870 aa14.6□□□□□ -0.07
MBD3-203ENST00000585903 KCNQ4P56696 695 aa14.59□□□□□ -0.07
MBD3-203ENST00000585903 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
MBD3-203ENST00000585903 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
MBD3-203ENST00000585903 EYA1Q99502 592 aa14.59□□□□□ -0.07
MBD3-203ENST00000585903 MPRIPQ6WCQ1 1025 aa14.58□□□□□ -0.08
MBD3-203ENST00000585903 CD2APQ9Y5K6 639 aa14.58□□□□□ -0.08
MBD3-203ENST00000585903 GRIN3BO60391 1043 aa14.57□□□□□ -0.08
MBD3-203ENST00000585903 IFNL2Q8IZJ0 200 aa14.57□□□□□ -0.08
MBD3-203ENST00000585903 PIGBQ92521 554 aa14.57□□□□□ -0.08
MBD3-203ENST00000585903 PPM1GO15355 546 aaPredicted RBP14.56□□□□□ -0.08
MBD3-203ENST00000585903 SSFA2P28290 1259 aa14.56□□□□□ -0.08
MBD3-203ENST00000585903 IGSF1Q8N6C5 1336 aa14.56□□□□□ -0.08
MBD3-203ENST00000585903 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
MBD3-203ENST00000585903 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
MBD3-203ENST00000585903 PHKG2P15735 406 aa14.55□□□□□ -0.08
MBD3-203ENST00000585903 HSPA6P17066 643 aa14.55□□□□□ -0.08
MBD3-203ENST00000585903 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
MBD3-203ENST00000585903 NLGN2Q8NFZ4 835 aa14.55□□□□□ -0.08
MBD3-203ENST00000585903 AK7Q96M32 723 aa14.55□□□□□ -0.08
MBD3-203ENST00000585903 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
MBD3-203ENST00000585903 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
MBD3-203ENST00000585903 ERVV-2B6SEH9 535 aa14.54□□□□□ -0.08
MBD3-203ENST00000585903 YBX3P16989 372 aaKnown RBP eCLIP14.54□□□□□ -0.08
MBD3-203ENST00000585903 SIK1P57059 783 aa14.54□□□□□ -0.08
MBD3-203ENST00000585903 EIF4A2Q14240 407 aaKnown RBP14.54□□□□□ -0.08
MBD3-203ENST00000585903 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
MBD3-203ENST00000585903 MSH5O43196 834 aa14.53□□□□□ -0.08
MBD3-203ENST00000585903 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
MBD3-203ENST00000585903 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.09
MBD3-203ENST00000585903 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
MBD3-203ENST00000585903 ADCY9O60503 1353 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms