RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 NWD2Q9ULI1 1742 aa29.52■■■□□ 2.32
LAMA3-204ENST00000585600 NCBP3Q53F19 620 aaKnown RBP29.51■■■□□ 2.31
LAMA3-204ENST00000585600 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
LAMA3-204ENST00000585600 TRIM35Q9UPQ4 493 aa29.5■■■□□ 2.31
LAMA3-204ENST00000585600 AFF2P51816 1311 aa29.5■■■□□ 2.31
LAMA3-204ENST00000585600 SPATA31A1Q5TZJ5 1347 aa29.5■■■□□ 2.31
LAMA3-204ENST00000585600 ZNF521Q96K83 1311 aa29.5■■■□□ 2.31
LAMA3-204ENST00000585600 TATP17735 454 aaPredicted RBP29.5■■■□□ 2.31
LAMA3-204ENST00000585600 IRX6P78412 446 aaPredicted RBP29.5■■■□□ 2.31
LAMA3-204ENST00000585600 SPATA31A5Q5VU36 1347 aa29.49■■■□□ 2.31
LAMA3-204ENST00000585600 RNF123Q5XPI4 1314 aa29.49■■■□□ 2.31
LAMA3-204ENST00000585600 SPATA31A7Q8IWB4 1347 aa29.49■■■□□ 2.31
LAMA3-204ENST00000585600 CCDC27Q2M243 656 aa29.48■■■□□ 2.31
LAMA3-204ENST00000585600 WWC1Q8IX03 1113 aa29.48■■■□□ 2.31
LAMA3-204ENST00000585600 VPS72Q15906 364 aa29.48■■■□□ 2.31
LAMA3-204ENST00000585600 GAS2L2Q8NHY3 880 aa29.48■■■□□ 2.31
LAMA3-204ENST00000585600 IL2RBP14784 551 aa29.47■■■□□ 2.31
LAMA3-204ENST00000585600 PLEKHO1Q53GL0 409 aaPredicted RBP29.47■■■□□ 2.31
LAMA3-204ENST00000585600 AMOTQ4VCS5 1084 aa29.46■■■□□ 2.31
LAMA3-204ENST00000585600 CCDC9Q9Y3X0 531 aaKnown RBP29.44■■■□□ 2.3
LAMA3-204ENST00000585600 OVOS2A0A0G2JMS6 1433 aa29.44■■■□□ 2.3
LAMA3-204ENST00000585600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.43■■■□□ 2.3
LAMA3-204ENST00000585600 THRAP3Q9Y2W1 955 aaKnown RBP29.43■■■□□ 2.3
LAMA3-204ENST00000585600 PLEKHG2Q9H7P9 1386 aa29.42■■■□□ 2.3
LAMA3-204ENST00000585600 DISP2A7MBM2 1401 aa29.42■■■□□ 2.3
LAMA3-204ENST00000585600 PDE3BQ13370 1112 aa29.42■■■□□ 2.3
LAMA3-204ENST00000585600 ZNF530Q6P9A1 599 aaPredicted RBP29.41■■■□□ 2.3
LAMA3-204ENST00000585600 DCTN1Q14203 1278 aa29.4■■■□□ 2.3
LAMA3-204ENST00000585600 SPG7Q9UQ90 795 aa29.4■■■□□ 2.3
LAMA3-204ENST00000585600 CDCA7LQ96GN5 454 aa29.39■■■□□ 2.3
LAMA3-204ENST00000585600 BARGINQ6ZT62 677 aa29.38■■■□□ 2.29
LAMA3-204ENST00000585600 THUMPD2Q9BTF0 503 aaKnown RBP29.38■■■□□ 2.29
LAMA3-204ENST00000585600 GNAT3A8MTJ3 354 aa29.38■■■□□ 2.29
LAMA3-204ENST00000585600 ZCRB1Q8TBF4 217 aaKnown RBP29.38■■■□□ 2.29
LAMA3-204ENST00000585600 SPINK5Q9NQ38 1064 aaPredicted RBP29.38■■■□□ 2.29
LAMA3-204ENST00000585600 LMOD3Q0VAK6 560 aa29.37■■■□□ 2.29
LAMA3-204ENST00000585600 AKAP4Q5JQC9 854 aa29.37■■■□□ 2.29
LAMA3-204ENST00000585600 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.37■■■□□ 2.29
LAMA3-204ENST00000585600 CYP27B1O15528 508 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 MCM10Q7L590 875 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 WDR63Q8IWG1 891 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 ATRNO75882 1429 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 MAP3K5Q99683 1374 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 GOLGA2Q08379 1002 aa29.36■■■□□ 2.29
LAMA3-204ENST00000585600 TRPC5Q9UL62 973 aaPredicted RBP29.36■■■□□ 2.29
LAMA3-204ENST00000585600 HTATSF1O43719 755 aaKnown RBP29.35■■■□□ 2.29
LAMA3-204ENST00000585600 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
LAMA3-204ENST00000585600 PHKG2P15735 406 aa29.34■■■□□ 2.29
LAMA3-204ENST00000585600 C1orf141Q5JVX7 400 aa29.34■■■□□ 2.29
LAMA3-204ENST00000585600 IL17REQ8NFR9 667 aa29.34■■■□□ 2.29
LAMA3-204ENST00000585600 CDCA7Q9BWT1 371 aaPredicted RBP29.34■■■□□ 2.29
LAMA3-204ENST00000585600 QTRT2Q9H974 415 aaKnown RBP29.34■■■□□ 2.29
LAMA3-204ENST00000585600 FAM98CQ17RN3 349 aaKnown RBP29.33■■■□□ 2.29
LAMA3-204ENST00000585600 RTF1Q92541 710 aaKnown RBP29.33■■■□□ 2.29
LAMA3-204ENST00000585600 PARP4Q9UKK3 1724 aaKnown RBP29.33■■■□□ 2.29
LAMA3-204ENST00000585600 IFNL2Q8IZJ0 200 aa29.32■■■□□ 2.28
LAMA3-204ENST00000585600 PKD1L3Q7Z443 1732 aa29.31■■■□□ 2.28
LAMA3-204ENST00000585600 LGR6Q9HBX8 967 aa29.31■■■□□ 2.28
LAMA3-204ENST00000585600 DLG5Q8TDM6 1919 aa29.31■■■□□ 2.28
LAMA3-204ENST00000585600 SLFN5Q08AF3 891 aa29.31■■■□□ 2.28
LAMA3-204ENST00000585600 MPRIPQ6WCQ1 1025 aa29.3■■■□□ 2.28
LAMA3-204ENST00000585600 PCDH11XQ9BZA7 1347 aa29.3■■■□□ 2.28
LAMA3-204ENST00000585600 PCDH11YQ9BZA8 1340 aa29.3■■■□□ 2.28
LAMA3-204ENST00000585600 ILDR1Q86SU0 546 aaPredicted RBP29.29■■■□□ 2.28
LAMA3-204ENST00000585600 EXOC5O00471 708 aa29.29■■■□□ 2.28
LAMA3-204ENST00000585600 DDX54Q8TDD1 881 aaKnown RBP29.29■■■□□ 2.28
LAMA3-204ENST00000585600 TRMT2AQ8IZ69 625 aaKnown RBP29.28■■■□□ 2.28
LAMA3-204ENST00000585600 GLI3P10071 1580 aa29.28■■■□□ 2.28
LAMA3-204ENST00000585600 CEMIPQ8WUJ3 1361 aa29.27■■■□□ 2.28
LAMA3-204ENST00000585600 RNMTO43148 476 aaKnown RBP29.27■■■□□ 2.28
LAMA3-204ENST00000585600 ZNF772Q68DY9 489 aaPredicted RBP29.27■■■□□ 2.28
LAMA3-204ENST00000585600 IL16Q14005 1332 aa29.26■■■□□ 2.28
LAMA3-204ENST00000585600 E9PSI1 815 aa29.26■■■□□ 2.27
LAMA3-204ENST00000585600 DDB1Q16531 1140 aa29.26■■■□□ 2.27
LAMA3-204ENST00000585600 DUSP27Q5VZP5 1158 aa29.25■■■□□ 2.27
LAMA3-204ENST00000585600 ONECUT3O60422 494 aaPredicted RBP29.24■■■□□ 2.27
LAMA3-204ENST00000585600 NKX1-1Q15270 411 aaPredicted RBP29.24■■■□□ 2.27
LAMA3-204ENST00000585600 RGS17Q9UGC6 210 aaPredicted RBP29.24■■■□□ 2.27
LAMA3-204ENST00000585600 KDM6AO15550 1401 aaPredicted RBP29.24■■■□□ 2.27
LAMA3-204ENST00000585600 TNS2Q63HR2 1409 aa29.24■■■□□ 2.27
LAMA3-204ENST00000585600 WNK3Q9BYP7 1800 aa29.24■■■□□ 2.27
LAMA3-204ENST00000585600 ZNF853P0CG23 659 aa29.24■■■□□ 2.27
LAMA3-204ENST00000585600 CALD1Q05682 793 aaKnown RBP29.24■■■□□ 2.27
LAMA3-204ENST00000585600 SHANK3Q9BYB0 1731 aa29.23■■■□□ 2.27
LAMA3-204ENST00000585600 DCAF5Q96JK2 942 aa29.22■■■□□ 2.27
LAMA3-204ENST00000585600 HSP90AB1P08238 724 aaKnown RBP29.22■■■□□ 2.27
LAMA3-204ENST00000585600 CFAP44Q96MT7 982 aa29.21■■■□□ 2.27
LAMA3-204ENST00000585600 IFT57Q9NWB7 429 aa29.21■■■□□ 2.27
LAMA3-204ENST00000585600 LAS1LQ9Y4W2 734 aaKnown RBP29.21■■■□□ 2.27
LAMA3-204ENST00000585600 TSR2Q969E8 191 aaKnown RBP29.2■■■□□ 2.26
LAMA3-204ENST00000585600 RBM19Q9Y4C8 960 aaKnown RBP29.2■■■□□ 2.26
LAMA3-204ENST00000585600 LRRC37A3O60309 1634 aa29.18■■■□□ 2.26
LAMA3-204ENST00000585600 GNAI1P63096 354 aa29.18■■■□□ 2.26
LAMA3-204ENST00000585600 B4GALNT3Q6L9W6 998 aa29.18■■■□□ 2.26
LAMA3-204ENST00000585600 MARCH10Q8NA82 808 aaPredicted RBP29.18■■■□□ 2.26
LAMA3-204ENST00000585600 A0A0G2JS52 829 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 CHL1O00533 1208 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 MYT1Q01538 1121 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 MYH16Q9H6N6 1097 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 MIS18AQ9NYP9 233 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms