RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 RGPD2P0DJD1 1756 aa32.09■■■□□ 2.73
LSM7-203ENST00000585409 SLC27A3Q5K4L6 730 aa32.08■■■□□ 2.73
LSM7-203ENST00000585409 DOT1LQ8TEK3 1739 aa32.08■■■□□ 2.73
LSM7-203ENST00000585409 LY75O60449 1722 aa32.07■■■□□ 2.72
LSM7-203ENST00000585409 DDX54Q8TDD1 881 aaKnown RBP32.06■■■□□ 2.72
LSM7-203ENST00000585409 MAP3K19Q56UN5 1328 aa32.04■■■□□ 2.72
LSM7-203ENST00000585409 SLC16A10Q8TF71 515 aa32.04■■■□□ 2.72
LSM7-203ENST00000585409 LTV1Q96GA3 475 aaPredicted RBP32.04■■■□□ 2.72
LSM7-203ENST00000585409 ANKRD36BQ8N2N9 1353 aa32.03■■■□□ 2.72
LSM7-203ENST00000585409 HOXC9P31274 260 aa32.02■■■□□ 2.72
LSM7-203ENST00000585409 PNPLA7Q6ZV29 1317 aa32.01■■■□□ 2.72
LSM7-203ENST00000585409 COG3Q96JB2 828 aa32.01■■■□□ 2.71
LSM7-203ENST00000585409 NSD2O96028 1365 aa32.01■■■□□ 2.71
LSM7-203ENST00000585409 MEGF6O75095 1541 aa31.99■■■□□ 2.71
LSM7-203ENST00000585409 PRIM1P49642 420 aaKnown RBP31.98■■■□□ 2.71
LSM7-203ENST00000585409 FBLN1P23142 703 aa31.96■■■□□ 2.71
LSM7-203ENST00000585409 RTL1A6NKG5 1358 aa31.95■■■□□ 2.71
LSM7-203ENST00000585409 AMPHP49418 695 aa31.95■■■□□ 2.71
LSM7-203ENST00000585409 KCNQ4P56696 695 aa31.95■■■□□ 2.71
LSM7-203ENST00000585409 SYTL4Q96C24 671 aaPredicted RBP31.95■■■□□ 2.71
LSM7-203ENST00000585409 ZCRB1Q8TBF4 217 aaKnown RBP31.94■■■□□ 2.7
LSM7-203ENST00000585409 TFCP2L1Q9NZI6 479 aa31.94■■■□□ 2.7
LSM7-203ENST00000585409 POLD1P28340 1107 aa31.93■■■□□ 2.7
LSM7-203ENST00000585409 POLR3GLQ9BT43 218 aa31.93■■■□□ 2.7
LSM7-203ENST00000585409 GPR162Q16538 588 aa31.9■■■□□ 2.7
LSM7-203ENST00000585409 NBPF6Q5VWK0 638 aa31.88■■■□□ 2.69
LSM7-203ENST00000585409 NBPF4Q96M43 638 aa31.88■■■□□ 2.69
LSM7-203ENST00000585409 CGNL1Q0VF96 1302 aa31.87■■■□□ 2.69
LSM7-203ENST00000585409 CCNL1Q9UK58 526 aaPredicted RBP31.87■■■□□ 2.69
LSM7-203ENST00000585409 FYB1O15117 783 aa31.86■■■□□ 2.69
LSM7-203ENST00000585409 RRS1Q15050 365 aaKnown RBP31.86■■■□□ 2.69
LSM7-203ENST00000585409 GOLGB1Q14789 3259 aaKnown RBP31.85■■■□□ 2.69
LSM7-203ENST00000585409 KLHL34Q8N239 644 aa31.85■■■□□ 2.69
LSM7-203ENST00000585409 C5P01031 1676 aa31.84■■■□□ 2.69
LSM7-203ENST00000585409 KIF20BQ96Q89 1820 aa31.84■■■□□ 2.69
LSM7-203ENST00000585409 C1QTNF8P60827 252 aa31.83■■■□□ 2.69
LSM7-203ENST00000585409 TAF1LQ8IZX4 1826 aa31.82■■■□□ 2.68
LSM7-203ENST00000585409 NLGN2Q8NFZ4 835 aa31.82■■■□□ 2.68
LSM7-203ENST00000585409 GGNBP2Q9H3C7 697 aa31.82■■■□□ 2.68
LSM7-203ENST00000585409 SMG6Q86US8 1419 aaKnown RBP31.82■■■□□ 2.68
LSM7-203ENST00000585409 USHBP1Q8N6Y0 703 aa31.81■■■□□ 2.68
LSM7-203ENST00000585409 COL23A1Q86Y22 540 aaPredicted RBP31.79■■■□□ 2.68
LSM7-203ENST00000585409 RAPGEF4Q8WZA2 1011 aa31.79■■■□□ 2.68
LSM7-203ENST00000585409 INSRP06213 1382 aa31.79■■■□□ 2.68
LSM7-203ENST00000585409 KIF7Q2M1P5 1343 aa31.78■■■□□ 2.68
LSM7-203ENST00000585409 PELP1Q8IZL8 1130 aaKnown RBP31.76■■■□□ 2.67
LSM7-203ENST00000585409 KIF24Q5T7B8 1368 aa31.76■■■□□ 2.67
LSM7-203ENST00000585409 ITGB4P16144 1822 aa31.75■■■□□ 2.67
LSM7-203ENST00000585409 SENP3-EIF4A1A0A087X0R7 540 aa31.75■■■□□ 2.67
LSM7-203ENST00000585409 TATP17735 454 aaPredicted RBP31.75■■■□□ 2.67
LSM7-203ENST00000585409 TOGARAM1Q9Y4F4 1720 aa31.75■■■□□ 2.67
LSM7-203ENST00000585409 PCDH11XQ9BZA7 1347 aa31.75■■■□□ 2.67
LSM7-203ENST00000585409 PCDH11YQ9BZA8 1340 aa31.75■■■□□ 2.67
LSM7-203ENST00000585409 FLT4P35916 1363 aa31.74■■■□□ 2.67
LSM7-203ENST00000585409 HSP90AB2PQ58FF8 381 aa31.74■■■□□ 2.67
LSM7-203ENST00000585409 PKD1L3Q7Z443 1732 aa31.73■■■□□ 2.67
LSM7-203ENST00000585409 MSH5O43196 834 aa31.72■■■□□ 2.67
LSM7-203ENST00000585409 YBX3P16989 372 aaKnown RBP eCLIP31.72■■■□□ 2.67
LSM7-203ENST00000585409 PALLDQ8WX93 1383 aa31.7■■■□□ 2.67
LSM7-203ENST00000585409 CYP27B1O15528 508 aa31.69■■■□□ 2.66
LSM7-203ENST00000585409 GRIN3BO60391 1043 aa31.69■■■□□ 2.66
LSM7-203ENST00000585409 HMGB2P26583 209 aaKnown RBP31.69■■■□□ 2.66
LSM7-203ENST00000585409 C4BP0C0L5 1744 aa31.69■■■□□ 2.66
LSM7-203ENST00000585409 GIGYF1O75420 1035 aaPredicted RBP31.68■■■□□ 2.66
LSM7-203ENST00000585409 MSL1Q68DK7 614 aa31.68■■■□□ 2.66
LSM7-203ENST00000585409 NCAPD2Q15021 1401 aa31.67■■■□□ 2.66
LSM7-203ENST00000585409 ANKRD26Q9UPS8 1709 aa31.67■■■□□ 2.66
LSM7-203ENST00000585409 NSD3Q9BZ95 1437 aa31.66■■■□□ 2.66
LSM7-203ENST00000585409 UBR3Q6ZT12 1888 aa31.66■■■□□ 2.66
LSM7-203ENST00000585409 FLAD1Q8NFF5 587 aa31.66■■■□□ 2.66
LSM7-203ENST00000585409 PANK3Q9H999 370 aa31.66■■■□□ 2.66
LSM7-203ENST00000585409 WASHC2AQ641Q2 1341 aa31.66■■■□□ 2.66
LSM7-203ENST00000585409 MPRIPQ6WCQ1 1025 aa31.65■■■□□ 2.66
LSM7-203ENST00000585409 MAP2P11137 1827 aaKnown RBP31.63■■■□□ 2.65
LSM7-203ENST00000585409 CARD14Q9BXL6 1004 aa31.63■■■□□ 2.65
LSM7-203ENST00000585409 CD2APQ9Y5K6 639 aa31.63■■■□□ 2.65
LSM7-203ENST00000585409 SMARCC1Q92922 1105 aaPredicted RBP31.61■■■□□ 2.65
LSM7-203ENST00000585409 EMILIN1Q9Y6C2 1016 aa31.61■■■□□ 2.65
LSM7-203ENST00000585409 NKX1-1Q15270 411 aaPredicted RBP31.59■■■□□ 2.65
LSM7-203ENST00000585409 KNSTRNQ9Y448 316 aa31.59■■■□□ 2.65
LSM7-203ENST00000585409 AMIGO3Q86WK7 504 aa31.58■■■□□ 2.65
LSM7-203ENST00000585409 PIGBQ92521 554 aa31.57■■■□□ 2.64
LSM7-203ENST00000585409 AK7Q96M32 723 aa31.55■■■□□ 2.64
LSM7-203ENST00000585409 ATP10DQ9P241 1426 aa31.53■■■□□ 2.64
LSM7-203ENST00000585409 SPG7Q9UQ90 795 aa31.52■■■□□ 2.64
LSM7-203ENST00000585409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.51■■■□□ 2.63
LSM7-203ENST00000585409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.5■■■□□ 2.63
LSM7-203ENST00000585409 ADCY9O60503 1353 aa31.5■■■□□ 2.63
LSM7-203ENST00000585409 SSFA2P28290 1259 aa31.49■■■□□ 2.63
LSM7-203ENST00000585409 SMIM5Q71RC9 77 aa31.49■■■□□ 2.63
LSM7-203ENST00000585409 EYA1Q99502 592 aa31.49■■■□□ 2.63
LSM7-203ENST00000585409 CEP350Q5VT06 3117 aa31.48■■■□□ 2.63
LSM7-203ENST00000585409 LOC102724428A0A0B4J2F2 783 aa31.48■■■□□ 2.63
LSM7-203ENST00000585409 PHF14O94880 888 aa31.48■■■□□ 2.63
LSM7-203ENST00000585409 SIK1P57059 783 aa31.48■■■□□ 2.63
LSM7-203ENST00000585409 LINC00116Q8NCU8 138 aa31.48■■■□□ 2.63
LSM7-203ENST00000585409 PPM1GO15355 546 aaPredicted RBP31.47■■■□□ 2.63
LSM7-203ENST00000585409 TMOD3Q9NYL9 352 aa31.44■■■□□ 2.62
LSM7-203ENST00000585409 IGSF1Q8N6C5 1336 aa31.44■■■□□ 2.62
LSM7-203ENST00000585409 POLKQ9UBT6 870 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms