RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
TRIM47-202ENST00000585333 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
TRIM47-202ENST00000585333 NFE2L2Q16236 605 aa17■□□□□ 0.31
TRIM47-202ENST00000585333 CCDC27Q2M243 656 aa17■□□□□ 0.31
TRIM47-202ENST00000585333 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
TRIM47-202ENST00000585333 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
TRIM47-202ENST00000585333 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
TRIM47-202ENST00000585333 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
TRIM47-202ENST00000585333 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
TRIM47-202ENST00000585333 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
TRIM47-202ENST00000585333 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
TRIM47-202ENST00000585333 APAF1O14727 1248 aa16.98■□□□□ 0.31
TRIM47-202ENST00000585333 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
TRIM47-202ENST00000585333 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
TRIM47-202ENST00000585333 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
TRIM47-202ENST00000585333 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
TRIM47-202ENST00000585333 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
TRIM47-202ENST00000585333 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
TRIM47-202ENST00000585333 ATRNO75882 1429 aa16.97■□□□□ 0.31
TRIM47-202ENST00000585333 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
TRIM47-202ENST00000585333 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-202ENST00000585333 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
TRIM47-202ENST00000585333 RIPK4P57078 832 aa16.95■□□□□ 0.3
TRIM47-202ENST00000585333 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
TRIM47-202ENST00000585333 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
TRIM47-202ENST00000585333 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
TRIM47-202ENST00000585333 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 EXOC5O00471 708 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-202ENST00000585333 IFNL2Q8IZJ0 200 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
TRIM47-202ENST00000585333 MEGF6O75095 1541 aa16.94■□□□□ 0.3
TRIM47-202ENST00000585333 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
TRIM47-202ENST00000585333 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
TRIM47-202ENST00000585333 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-202ENST00000585333 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
TRIM47-202ENST00000585333 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
TRIM47-202ENST00000585333 RBM6P78332 1123 aaKnown RBP16.92■□□□□ 0.3
TRIM47-202ENST00000585333 DDB1Q16531 1140 aa16.92■□□□□ 0.3
TRIM47-202ENST00000585333 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
TRIM47-202ENST00000585333 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
TRIM47-202ENST00000585333 IL16Q14005 1332 aa16.91■□□□□ 0.3
TRIM47-202ENST00000585333 A0A0G2JS52 829 aa16.9■□□□□ 0.3
TRIM47-202ENST00000585333 MYT1Q01538 1121 aa16.9■□□□□ 0.3
TRIM47-202ENST00000585333 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
TRIM47-202ENST00000585333 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
TRIM47-202ENST00000585333 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
TRIM47-202ENST00000585333 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
TRIM47-202ENST00000585333 PHKG2P15735 406 aa16.88■□□□□ 0.29
TRIM47-202ENST00000585333 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
TRIM47-202ENST00000585333 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
TRIM47-202ENST00000585333 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
TRIM47-202ENST00000585333 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
TRIM47-202ENST00000585333 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
TRIM47-202ENST00000585333 E9PSI1 815 aa16.87■□□□□ 0.29
TRIM47-202ENST00000585333 RXRBP28702 533 aa16.87■□□□□ 0.29
TRIM47-202ENST00000585333 GLI3P10071 1580 aa16.86■□□□□ 0.29
TRIM47-202ENST00000585333 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
TRIM47-202ENST00000585333 TEFQ10587 303 aa16.86■□□□□ 0.29
TRIM47-202ENST00000585333 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
TRIM47-202ENST00000585333 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-202ENST00000585333 GNAI1P63096 354 aa16.85■□□□□ 0.29
TRIM47-202ENST00000585333 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
TRIM47-202ENST00000585333 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
TRIM47-202ENST00000585333 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
TRIM47-202ENST00000585333 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
TRIM47-202ENST00000585333 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
TRIM47-202ENST00000585333 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
TRIM47-202ENST00000585333 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-202ENST00000585333 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
TRIM47-202ENST00000585333 CYP27B1O15528 508 aa16.83■□□□□ 0.28
TRIM47-202ENST00000585333 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
TRIM47-202ENST00000585333 CHMP4AQ9BY43 222 aa16.83■□□□□ 0.28
TRIM47-202ENST00000585333 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
TRIM47-202ENST00000585333 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
TRIM47-202ENST00000585333 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
TRIM47-202ENST00000585333 BCL9O00512 1426 aa16.81■□□□□ 0.28
TRIM47-202ENST00000585333 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-202ENST00000585333 POTEAQ6S8J7 498 aa16.81■□□□□ 0.28
TRIM47-202ENST00000585333 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
TRIM47-202ENST00000585333 CABP4P57796 275 aa16.8■□□□□ 0.28
TRIM47-202ENST00000585333 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
TRIM47-202ENST00000585333 MCM10Q7L590 875 aa16.8■□□□□ 0.28
TRIM47-202ENST00000585333 MRC1P22897 1456 aa16.8■□□□□ 0.28
TRIM47-202ENST00000585333 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
TRIM47-202ENST00000585333 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
TRIM47-202ENST00000585333 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
TRIM47-202ENST00000585333 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-202ENST00000585333 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-202ENST00000585333 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
TRIM47-202ENST00000585333 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
TRIM47-202ENST00000585333 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
TRIM47-202ENST00000585333 KRT27Q7Z3Y8 459 aa16.77■□□□□ 0.28
TRIM47-202ENST00000585333 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
TRIM47-202ENST00000585333 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
TRIM47-202ENST00000585333 CHL1O00533 1208 aa16.76■□□□□ 0.27
TRIM47-202ENST00000585333 DCTN1Q14203 1278 aa16.76■□□□□ 0.27
TRIM47-202ENST00000585333 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms