RNA–Protein interactions for RNA: ENST00000585296.1

NCOR1-226, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-226ENST00000585296 MSL1Q68DK7 614 aa25.99■■□□□ 1.75
NCOR1-226ENST00000585296 NSD2O96028 1365 aa25.98■■□□□ 1.75
NCOR1-226ENST00000585296 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
NCOR1-226ENST00000585296 KIF3CO14782 793 aa25.97■■□□□ 1.75
NCOR1-226ENST00000585296 PRIM1P49642 420 aaKnown RBP25.97■■□□□ 1.75
NCOR1-226ENST00000585296 APLP1P51693 650 aa25.97■■□□□ 1.75
NCOR1-226ENST00000585296 FAM208AQ9UK61 1670 aaKnown RBP25.94■■□□□ 1.74
NCOR1-226ENST00000585296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.74
NCOR1-226ENST00000585296 DNAJC5GQ8N7S2 189 aa25.91■■□□□ 1.74
NCOR1-226ENST00000585296 NME9Q86XW9 330 aa25.9■■□□□ 1.74
NCOR1-226ENST00000585296 C5P01031 1676 aa25.9■■□□□ 1.74
NCOR1-226ENST00000585296 USP47Q96K76 1375 aa25.89■■□□□ 1.74
NCOR1-226ENST00000585296 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
NCOR1-226ENST00000585296 FLAD1Q8NFF5 587 aa25.87■■□□□ 1.73
NCOR1-226ENST00000585296 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
NCOR1-226ENST00000585296 SBNO2Q9Y2G9 1366 aa25.85■■□□□ 1.73
NCOR1-226ENST00000585296 NEUROD1Q13562 356 aa25.85■■□□□ 1.73
NCOR1-226ENST00000585296 CICQ96RK0 1608 aaPredicted RBP25.84■■□□□ 1.73
NCOR1-226ENST00000585296 TOMM70O94826 608 aa25.83■■□□□ 1.73
NCOR1-226ENST00000585296 IP6K1Q92551 441 aa25.83■■□□□ 1.73
NCOR1-226ENST00000585296 WWC3Q9ULE0 1092 aa25.83■■□□□ 1.73
NCOR1-226ENST00000585296 CD163L1Q9NR16 1453 aa25.83■■□□□ 1.73
NCOR1-226ENST00000585296 TAF1LQ8IZX4 1826 aa25.83■■□□□ 1.73
NCOR1-226ENST00000585296 HMGB2P26583 209 aaKnown RBP25.82■■□□□ 1.72
NCOR1-226ENST00000585296 ZCRB1Q8TBF4 217 aaKnown RBP25.82■■□□□ 1.72
NCOR1-226ENST00000585296 LTV1Q96GA3 475 aaPredicted RBP25.82■■□□□ 1.72
NCOR1-226ENST00000585296 WDR90Q96KV7 1748 aa25.81■■□□□ 1.72
NCOR1-226ENST00000585296 SIN3AQ96ST3 1273 aa25.81■■□□□ 1.72
NCOR1-226ENST00000585296 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
NCOR1-226ENST00000585296 MEGF6O75095 1541 aa25.79■■□□□ 1.72
NCOR1-226ENST00000585296 COL13A1Q5TAT6 717 aaPredicted RBP25.79■■□□□ 1.72
NCOR1-226ENST00000585296 TONSLQ96HA7 1378 aa25.77■■□□□ 1.72
NCOR1-226ENST00000585296 EDC4Q6P2E9 1401 aaKnown RBP25.77■■□□□ 1.72
NCOR1-226ENST00000585296 CAPN15O75808 1086 aa25.76■■□□□ 1.71
NCOR1-226ENST00000585296 C4BP0C0L5 1744 aa25.76■■□□□ 1.71
NCOR1-226ENST00000585296 TOGARAM1Q9Y4F4 1720 aa25.76■■□□□ 1.71
NCOR1-226ENST00000585296 RGPD2P0DJD1 1756 aa25.76■■□□□ 1.71
NCOR1-226ENST00000585296 PALLDQ8WX93 1383 aa25.74■■□□□ 1.71
NCOR1-226ENST00000585296 HDGFL2Q7Z4V5 671 aaPredicted RBP25.74■■□□□ 1.71
NCOR1-226ENST00000585296 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
NCOR1-226ENST00000585296 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
NCOR1-226ENST00000585296 KLRG1Q96E93 195 aa25.73■■□□□ 1.71
NCOR1-226ENST00000585296 JMYQ8N9B5 988 aa25.72■■□□□ 1.71
NCOR1-226ENST00000585296 AK7Q96M32 723 aa25.72■■□□□ 1.71
NCOR1-226ENST00000585296 AMIGO3Q86WK7 504 aa25.71■■□□□ 1.71
NCOR1-226ENST00000585296 L3MBTL2Q969R5 705 aa25.71■■□□□ 1.71
NCOR1-226ENST00000585296 NSD3Q9BZ95 1437 aa25.71■■□□□ 1.71
NCOR1-226ENST00000585296 HOXC9P31274 260 aa25.7■■□□□ 1.7
NCOR1-226ENST00000585296 TMC1Q8TDI8 760 aa25.7■■□□□ 1.7
NCOR1-226ENST00000585296 CGNL1Q0VF96 1302 aa25.69■■□□□ 1.7
NCOR1-226ENST00000585296 PRELPP51888 382 aa25.69■■□□□ 1.7
NCOR1-226ENST00000585296 TNS4Q8IZW8 715 aa25.69■■□□□ 1.7
NCOR1-226ENST00000585296 NMRK2Q9NPI5 230 aa25.69■■□□□ 1.7
NCOR1-226ENST00000585296 MAP3K19Q56UN5 1328 aa25.68■■□□□ 1.7
NCOR1-226ENST00000585296 PHF14O94880 888 aa25.68■■□□□ 1.7
NCOR1-226ENST00000585296 RBM46Q8TBY0 533 aaKnown RBP25.68■■□□□ 1.7
NCOR1-226ENST00000585296 TIMELESSQ9UNS1 1208 aa25.68■■□□□ 1.7
NCOR1-226ENST00000585296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.67■■□□□ 1.7
NCOR1-226ENST00000585296 A0A1W2PP64 1363 aa25.67■■□□□ 1.7
NCOR1-226ENST00000585296 SLC12A5Q9H2X9 1139 aa25.66■■□□□ 1.7
NCOR1-226ENST00000585296 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
NCOR1-226ENST00000585296 KIF13BQ9NQT8 1826 aa25.65■■□□□ 1.7
NCOR1-226ENST00000585296 AMPHP49418 695 aa25.65■■□□□ 1.7
NCOR1-226ENST00000585296 HTRA3P83110 453 aa25.65■■□□□ 1.7
NCOR1-226ENST00000585296 KIAA1551Q9HCM1 1747 aa25.65■■□□□ 1.7
NCOR1-226ENST00000585296 SSFA2P28290 1259 aa25.64■■□□□ 1.7
NCOR1-226ENST00000585296 MPRIPQ6WCQ1 1025 aa25.64■■□□□ 1.7
NCOR1-226ENST00000585296 TERF2IPQ9NYB0 399 aa25.64■■□□□ 1.7
NCOR1-226ENST00000585296 SMIM5Q71RC9 77 aa25.63■■□□□ 1.69
NCOR1-226ENST00000585296 RAPGEF4Q8WZA2 1011 aa25.63■■□□□ 1.69
NCOR1-226ENST00000585296 SMARCC1Q92922 1105 aaPredicted RBP25.63■■□□□ 1.69
NCOR1-226ENST00000585296 PCNTO95613 3336 aa25.63■■□□□ 1.69
NCOR1-226ENST00000585296 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
NCOR1-226ENST00000585296 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
NCOR1-226ENST00000585296 NBPF6Q5VWK0 638 aa25.62■■□□□ 1.69
NCOR1-226ENST00000585296 NBPF4Q96M43 638 aa25.62■■□□□ 1.69
NCOR1-226ENST00000585296 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
NCOR1-226ENST00000585296 ITGB4P16144 1822 aa25.61■■□□□ 1.69
NCOR1-226ENST00000585296 FSTL1Q12841 308 aa25.61■■□□□ 1.69
NCOR1-226ENST00000585296 C16orf71Q8IYS4 520 aaPredicted RBP25.61■■□□□ 1.69
NCOR1-226ENST00000585296 BCS1LQ9Y276 419 aa25.61■■□□□ 1.69
NCOR1-226ENST00000585296 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
NCOR1-226ENST00000585296 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
NCOR1-226ENST00000585296 COG3Q96JB2 828 aa25.6■■□□□ 1.69
NCOR1-226ENST00000585296 TATP17735 454 aaPredicted RBP25.59■■□□□ 1.69
NCOR1-226ENST00000585296 TGFB2P61812 414 aa25.58■■□□□ 1.69
NCOR1-226ENST00000585296 ARHGAP27Q6ZUM4 889 aa25.58■■□□□ 1.69
NCOR1-226ENST00000585296 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.68
NCOR1-226ENST00000585296 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
NCOR1-226ENST00000585296 FBLN1P23142 703 aa25.57■■□□□ 1.68
NCOR1-226ENST00000585296 SMG6Q86US8 1419 aaKnown RBP25.56■■□□□ 1.68
NCOR1-226ENST00000585296 MMP10P09238 476 aa25.56■■□□□ 1.68
NCOR1-226ENST00000585296 LINC00116Q8NCU8 138 aa25.55■■□□□ 1.68
NCOR1-226ENST00000585296 BRCA1P38398 1863 aaKnown RBP25.54■■□□□ 1.68
NCOR1-226ENST00000585296 A0A0G2JLW4 131 aa25.54■■□□□ 1.68
NCOR1-226ENST00000585296 C10orf71Q711Q0 1435 aa25.54■■□□□ 1.68
NCOR1-226ENST00000585296 CYP27B1O15528 508 aa25.53■■□□□ 1.68
NCOR1-226ENST00000585296 PKD1L3Q7Z443 1732 aa25.53■■□□□ 1.68
NCOR1-226ENST00000585296 LOC102724428A0A0B4J2F2 783 aa25.52■■□□□ 1.68
NCOR1-226ENST00000585296 GNPATO15228 680 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms