RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 USP47Q96K76 1375 aa18.78■□□□□ 0.6
AC055811.3-201ENST00000584952 KAT6BQ8WYB5 2073 aa18.75■□□□□ 0.59
AC055811.3-201ENST00000584952 MEGF6O75095 1541 aa18.75■□□□□ 0.59
AC055811.3-201ENST00000584952 KCNQ4P56696 695 aa18.75■□□□□ 0.59
AC055811.3-201ENST00000584952 CDCA8Q53HL2 280 aa18.75■□□□□ 0.59
AC055811.3-201ENST00000584952 SLC16A10Q8TF71 515 aa18.74■□□□□ 0.59
AC055811.3-201ENST00000584952 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
AC055811.3-201ENST00000584952 NSD2O96028 1365 aa18.73■□□□□ 0.59
AC055811.3-201ENST00000584952 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
AC055811.3-201ENST00000584952 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
AC055811.3-201ENST00000584952 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
AC055811.3-201ENST00000584952 MAP3K5Q99683 1374 aa18.72■□□□□ 0.59
AC055811.3-201ENST00000584952 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
AC055811.3-201ENST00000584952 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
AC055811.3-201ENST00000584952 RGPD2P0DJD1 1756 aa18.71■□□□□ 0.59
AC055811.3-201ENST00000584952 SMG6Q86US8 1419 aaKnown RBP18.71■□□□□ 0.59
AC055811.3-201ENST00000584952 INSRP06213 1382 aa18.7■□□□□ 0.58
AC055811.3-201ENST00000584952 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
AC055811.3-201ENST00000584952 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
AC055811.3-201ENST00000584952 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
AC055811.3-201ENST00000584952 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
AC055811.3-201ENST00000584952 TATP17735 454 aaPredicted RBP18.69■□□□□ 0.58
AC055811.3-201ENST00000584952 POLD1P28340 1107 aa18.69■□□□□ 0.58
AC055811.3-201ENST00000584952 FLT4P35916 1363 aa18.68■□□□□ 0.58
AC055811.3-201ENST00000584952 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
AC055811.3-201ENST00000584952 ZNF784Q8NCA9 323 aaPredicted RBP18.67■□□□□ 0.58
AC055811.3-201ENST00000584952 TIMELESSQ9UNS1 1208 aa18.66■□□□□ 0.58
AC055811.3-201ENST00000584952 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
AC055811.3-201ENST00000584952 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
AC055811.3-201ENST00000584952 LY75O60449 1722 aa18.66■□□□□ 0.58
AC055811.3-201ENST00000584952 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
AC055811.3-201ENST00000584952 UTRNP46939 3433 aa18.65■□□□□ 0.58
AC055811.3-201ENST00000584952 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
AC055811.3-201ENST00000584952 GPR162Q16538 588 aa18.64■□□□□ 0.57
AC055811.3-201ENST00000584952 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
AC055811.3-201ENST00000584952 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
AC055811.3-201ENST00000584952 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
AC055811.3-201ENST00000584952 CYP27B1O15528 508 aa18.63■□□□□ 0.57
AC055811.3-201ENST00000584952 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
AC055811.3-201ENST00000584952 MSH5O43196 834 aa18.62■□□□□ 0.57
AC055811.3-201ENST00000584952 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
AC055811.3-201ENST00000584952 COL23A1Q86Y22 540 aaPredicted RBP18.62■□□□□ 0.57
AC055811.3-201ENST00000584952 COL24A1Q17RW2 1714 aa18.62■□□□□ 0.57
AC055811.3-201ENST00000584952 HMGB2P26583 209 aaKnown RBP18.61■□□□□ 0.57
AC055811.3-201ENST00000584952 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
AC055811.3-201ENST00000584952 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
AC055811.3-201ENST00000584952 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
AC055811.3-201ENST00000584952 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
AC055811.3-201ENST00000584952 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
AC055811.3-201ENST00000584952 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
AC055811.3-201ENST00000584952 FLAD1Q8NFF5 587 aa18.57■□□□□ 0.56
AC055811.3-201ENST00000584952 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
AC055811.3-201ENST00000584952 SPG7Q9UQ90 795 aa18.57■□□□□ 0.56
AC055811.3-201ENST00000584952 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
AC055811.3-201ENST00000584952 PIGBQ92521 554 aa18.56■□□□□ 0.56
AC055811.3-201ENST00000584952 EYA1Q99502 592 aa18.56■□□□□ 0.56
AC055811.3-201ENST00000584952 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
AC055811.3-201ENST00000584952 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
AC055811.3-201ENST00000584952 CHD4Q14839 1912 aa18.55■□□□□ 0.56
AC055811.3-201ENST00000584952 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
AC055811.3-201ENST00000584952 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
AC055811.3-201ENST00000584952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.55■□□□□ 0.56
AC055811.3-201ENST00000584952 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
AC055811.3-201ENST00000584952 C5P01031 1676 aa18.54■□□□□ 0.56
AC055811.3-201ENST00000584952 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.56
AC055811.3-201ENST00000584952 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
AC055811.3-201ENST00000584952 AK7Q96M32 723 aa18.52■□□□□ 0.56
AC055811.3-201ENST00000584952 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.55
AC055811.3-201ENST00000584952 YBX3P16989 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
AC055811.3-201ENST00000584952 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
AC055811.3-201ENST00000584952 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
AC055811.3-201ENST00000584952 CD2APQ9Y5K6 639 aa18.51■□□□□ 0.55
AC055811.3-201ENST00000584952 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
AC055811.3-201ENST00000584952 GRIN3BO60391 1043 aa18.5■□□□□ 0.55
AC055811.3-201ENST00000584952 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
AC055811.3-201ENST00000584952 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
AC055811.3-201ENST00000584952 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
AC055811.3-201ENST00000584952 ITGB4P16144 1822 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 TAF1LQ8IZX4 1826 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 PHKG2P15735 406 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 SIK1P57059 783 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
AC055811.3-201ENST00000584952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 PHF14O94880 888 aa18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 ASAP1Q9ULH1 1129 aa18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
AC055811.3-201ENST00000584952 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
AC055811.3-201ENST00000584952 SSFA2P28290 1259 aa18.46■□□□□ 0.55
AC055811.3-201ENST00000584952 PANK3Q9H999 370 aa18.46■□□□□ 0.55
AC055811.3-201ENST00000584952 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
AC055811.3-201ENST00000584952 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
AC055811.3-201ENST00000584952 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
AC055811.3-201ENST00000584952 ITPK1Q13572 414 aa18.45■□□□□ 0.54
AC055811.3-201ENST00000584952 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
AC055811.3-201ENST00000584952 IGSF1Q8N6C5 1336 aa18.44■□□□□ 0.54
AC055811.3-201ENST00000584952 GNPATO15228 680 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms