RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 SPINT1O43278 529 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 RAD21O60216 631 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 ADH1AP07327 375 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 MCCD1P59942 119 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 POLMQ9NP87 494 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-229ENST00000584754 STAU1O95793 577 aaKnown RBP7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 PTGIRP43119 386 aa7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 ERVK-9P63128 1117 aa7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 SEMA3FQ13275 785 aa7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
PPP4R1-229ENST00000584754 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 OXLD1Q5BKU9 147 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 CC2D2BQ6DHV5 1058 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 CCDC125Q86Z20 511 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 RNF135Q8IUD6 432 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 OSBPL3Q9H4L5 887 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
PPP4R1-229ENST00000584754 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
PPP4R1-229ENST00000584754 MEN1O00255 615 aa7.25□□□□□ -1.25
PPP4R1-229ENST00000584754 ADAMTS19Q8TE59 1207 aa7.25□□□□□ -1.25
PPP4R1-229ENST00000584754 ALG2Q9H553 416 aa7.25□□□□□ -1.25
PPP4R1-229ENST00000584754 A0A1W2PRU2 124 aa7.24□□□□□ -1.25
PPP4R1-229ENST00000584754 FOXD4L5Q5VV16 416 aaPredicted RBP7.24□□□□□ -1.25
PPP4R1-229ENST00000584754 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
PPP4R1-229ENST00000584754 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
PPP4R1-229ENST00000584754 HDGFL1Q5TGJ6 251 aa7.23□□□□□ -1.25
PPP4R1-229ENST00000584754 PRICKLE2Q7Z3G6 844 aa7.23□□□□□ -1.25
PPP4R1-229ENST00000584754 ARHGEF10LQ9HCE6 1279 aa7.23□□□□□ -1.25
PPP4R1-229ENST00000584754 TRAK2O60296 914 aa7.22□□□□□ -1.25
PPP4R1-229ENST00000584754 RHOQP17081 205 aa7.22□□□□□ -1.25
PPP4R1-229ENST00000584754 PTSQ03393 145 aa7.22□□□□□ -1.25
PPP4R1-229ENST00000584754 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
PPP4R1-229ENST00000584754 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.21□□□□□ -1.26
PPP4R1-229ENST00000584754 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
PPP4R1-229ENST00000584754 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
PPP4R1-229ENST00000584754 PLPP7Q8NBV4 271 aa7.21□□□□□ -1.26
PPP4R1-229ENST00000584754 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
PPP4R1-229ENST00000584754 SKIP12755 728 aa7.2□□□□□ -1.26
PPP4R1-229ENST00000584754 PROSER2Q86WR7 435 aaPredicted RBP7.2□□□□□ -1.26
PPP4R1-229ENST00000584754 PPFIA3O75145 1194 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 IL2RAP01589 272 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 SOX11P35716 441 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 USP4Q13107 963 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 CYP2U1Q7Z449 544 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 C14orf37Q86TY3 774 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 NLRP3Q96P20 1036 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
PPP4R1-229ENST00000584754 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
PPP4R1-229ENST00000584754 POU4F2Q12837 409 aa7.18□□□□□ -1.26
PPP4R1-229ENST00000584754 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
PPP4R1-229ENST00000584754 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
PPP4R1-229ENST00000584754 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 VSIG8P0DPA2 414 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 RNF144AP50876 292 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 CLN3Q13286 438 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 SUZ12Q15022 739 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 SLC27A3Q5K4L6 730 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 LYSMD3Q7Z3D4 306 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 CCDC155Q8N6L0 562 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 CNKSR1Q969H4 720 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 ZNF777Q9ULD5 760 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-229ENST00000584754 CENPCQ03188 943 aa7.16□□□□□ -1.26
PPP4R1-229ENST00000584754 ETNK1Q9HBU6 452 aa7.16□□□□□ -1.26
PPP4R1-229ENST00000584754 SLC35F4A4IF30 521 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 GNRH1P01148 92 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 PHKA2P46019 1235 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 NCOA4Q13772 614 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 MAP7D1Q3KQU3 841 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 GPR161Q8N6U8 529 aaKnown RBP7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 GLMNQ92990 594 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 GRIP2Q9C0E4 1043 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 SERTAD1Q9UHV2 236 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 TIMELESSQ9UNS1 1208 aa7.15□□□□□ -1.26
PPP4R1-229ENST00000584754 A6NJR5 290 aa7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 USP17L5A8MUK1 530 aa7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 SCNN1DP51172 638 aa7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 CUEDC1Q9NWM3 386 aaPredicted RBP7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 PCDHGA11Q9Y5H2 935 aa7.14□□□□□ -1.27
PPP4R1-229ENST00000584754 GDF10P55107 478 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 VWA5B2Q8N398 1253 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 TMEM151AQ8N4L1 468 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 XAGE2Q96GT9 111 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 HRH3Q9Y5N1 445 aa7.13□□□□□ -1.27
PPP4R1-229ENST00000584754 CDC14CA4D256 554 aa7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 EML3Q32P44 896 aa7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 SIRT1Q96EB6 747 aa7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 CALR3Q96L12 384 aaKnown RBP7.12□□□□□ -1.27
PPP4R1-229ENST00000584754 TMEM229AB2RXF0 380 aa7.11□□□□□ -1.27
PPP4R1-229ENST00000584754 GDF11O95390 407 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms