RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
CUEDC1-212ENST00000584746 ATP7BP35670 1465 aa22.35■■□□□ 1.17
CUEDC1-212ENST00000584746 RTF1Q92541 710 aaKnown RBP22.34■■□□□ 1.17
CUEDC1-212ENST00000584746 ARHGAP45Q92619 1136 aa22.34■■□□□ 1.17
CUEDC1-212ENST00000584746 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
CUEDC1-212ENST00000584746 K7ELQ4 463 aaPredicted RBP22.33■■□□□ 1.17
CUEDC1-212ENST00000584746 MAP4K4O95819 1239 aaPredicted RBP22.33■■□□□ 1.17
CUEDC1-212ENST00000584746 PTCH1Q13635 1447 aa22.33■■□□□ 1.17
CUEDC1-212ENST00000584746 ZGPATQ8N5A5 531 aaKnown RBP22.33■■□□□ 1.17
CUEDC1-212ENST00000584746 DCTPP1Q9H773 170 aa22.33■■□□□ 1.17
CUEDC1-212ENST00000584746 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
CUEDC1-212ENST00000584746 CHL1O00533 1208 aa22.32■■□□□ 1.16
CUEDC1-212ENST00000584746 NLRP6P59044 892 aa22.32■■□□□ 1.16
CUEDC1-212ENST00000584746 AMOTL2Q9Y2J4 779 aa22.32■■□□□ 1.16
CUEDC1-212ENST00000584746 RIMS1Q86UR5 1692 aaKnown RBP22.31■■□□□ 1.16
CUEDC1-212ENST00000584746 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
CUEDC1-212ENST00000584746 EYA1Q99502 592 aa22.31■■□□□ 1.16
CUEDC1-212ENST00000584746 SETD1BQ9UPS6 1966 aaKnown RBP22.31■■□□□ 1.16
CUEDC1-212ENST00000584746 KNDC1Q76NI1 1749 aa22.3■■□□□ 1.16
CUEDC1-212ENST00000584746 RIMBP3CA6NJZ7 1639 aa22.3■■□□□ 1.16
CUEDC1-212ENST00000584746 RIMBP3BA6NNM3 1639 aa22.3■■□□□ 1.16
CUEDC1-212ENST00000584746 RIMBP3Q9UFD9 1639 aa22.3■■□□□ 1.16
CUEDC1-212ENST00000584746 ANXA1P04083 346 aa22.3■■□□□ 1.16
CUEDC1-212ENST00000584746 L1TD1Q5T7N2 865 aaKnown RBP22.29■■□□□ 1.16
CUEDC1-212ENST00000584746 CDK12Q9NYV4 1490 aaPredicted RBP22.29■■□□□ 1.16
CUEDC1-212ENST00000584746 MCTP1Q6DN14 999 aa22.29■■□□□ 1.16
CUEDC1-212ENST00000584746 RILPL2Q969X0 211 aa22.29■■□□□ 1.16
CUEDC1-212ENST00000584746 EIF2S2P20042 333 aaKnown RBP22.28■■□□□ 1.16
CUEDC1-212ENST00000584746 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
CUEDC1-212ENST00000584746 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
CUEDC1-212ENST00000584746 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
CUEDC1-212ENST00000584746 PNMA6EA0A0J9YXQ4 647 aa22.27■■□□□ 1.16
CUEDC1-212ENST00000584746 LARP6Q9BRS8 491 aaKnown RBP22.27■■□□□ 1.16
CUEDC1-212ENST00000584746 RTL1A6NKG5 1358 aa22.27■■□□□ 1.16
CUEDC1-212ENST00000584746 DDIT3P35638 169 aa22.27■■□□□ 1.16
CUEDC1-212ENST00000584746 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.16
CUEDC1-212ENST00000584746 TRIM6-TRIM34B2RNG4 842 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 GRPEL1Q9HAV7 217 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 NRXN3Q9Y4C0 1643 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 TNRQ92752 1358 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 RAB3GAP1Q15042 981 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
CUEDC1-212ENST00000584746 SNX21Q969T3 373 aa22.25■■□□□ 1.15
CUEDC1-212ENST00000584746 USP26Q9BXU7 913 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 RGS12O14924 1447 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 PIK3R4Q99570 1358 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 DDX11L8A8MPP1 907 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 DDX49Q9Y6V7 483 aaKnown RBP22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 AATKQ6ZMQ8 1374 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 ATP10DQ9P241 1426 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 FSD2A1L4K1 749 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 PHAXQ9H814 394 aaKnown RBP22.24■■□□□ 1.15
CUEDC1-212ENST00000584746 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
CUEDC1-212ENST00000584746 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
CUEDC1-212ENST00000584746 GBP4Q96PP9 640 aa22.22■■□□□ 1.15
CUEDC1-212ENST00000584746 DIP2BQ9P265 1576 aa22.22■■□□□ 1.15
CUEDC1-212ENST00000584746 LMOD2Q6P5Q4 547 aa22.22■■□□□ 1.15
CUEDC1-212ENST00000584746 NUTM1Q86Y26 1132 aa22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 RBM27Q9P2N5 1060 aaKnown RBP22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 HDGFP51858 240 aaKnown RBP22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 UNC5CLQ8IV45 518 aa22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 UPF3BQ9BZI7 483 aaKnown RBP22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 LRRFIP2Q9Y608 721 aaKnown RBP22.21■■□□□ 1.15
CUEDC1-212ENST00000584746 CAVIN1Q6NZI2 390 aaKnown RBP22.2■■□□□ 1.14
CUEDC1-212ENST00000584746 STK31Q9BXU1 1019 aa22.2■■□□□ 1.14
CUEDC1-212ENST00000584746 NAP1L5Q96NT1 182 aaPredicted RBP22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 PALD1Q9ULE6 856 aa22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 BAG4O95429 457 aaKnown RBP22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 NEK4P51957 841 aa22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 FLIIQ13045 1269 aa22.19■■□□□ 1.14
CUEDC1-212ENST00000584746 PTPRUQ92729 1446 aa22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 IL25Q9H293 177 aa22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 ANO2Q9NQ90 1003 aa22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 USP6P35125 1406 aa22.18■■□□□ 1.14
CUEDC1-212ENST00000584746 KCNQ3O43525 872 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 PRPF40AO75400 957 aaKnown RBP22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 PDE1AP54750 535 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 IL17REQ8NFR9 667 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 ADAMTS13Q76LX8 1427 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 KCNA6P17658 529 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
CUEDC1-212ENST00000584746 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
CUEDC1-212ENST00000584746 EID1Q9Y6B2 187 aa22.16■■□□□ 1.14
CUEDC1-212ENST00000584746 CRB1P82279 1406 aa22.15■■□□□ 1.14
CUEDC1-212ENST00000584746 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
CUEDC1-212ENST00000584746 MRE11P49959 708 aa22.15■■□□□ 1.14
CUEDC1-212ENST00000584746 CEP170BQ9Y4F5 1589 aaPredicted RBP22.15■■□□□ 1.14
CUEDC1-212ENST00000584746 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.14
CUEDC1-212ENST00000584746 LGR6Q9HBX8 967 aa22.14■■□□□ 1.14
CUEDC1-212ENST00000584746 GDPD2Q9HCC8 539 aa22.14■■□□□ 1.14
CUEDC1-212ENST00000584746 GNAI2P04899 355 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms