RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ACSBG1Q96GR2 724 aa36.9■■■■□ 3.5
SMARCD2-210ENST00000584400 NCAPD2Q15021 1401 aa36.9■■■■□ 3.5
SMARCD2-210ENST00000584400 SBF2Q86WG5 1849 aa36.88■■■■□ 3.49
SMARCD2-210ENST00000584400 PCDH11XQ9BZA7 1347 aa36.87■■■■□ 3.49
SMARCD2-210ENST00000584400 PCDH11YQ9BZA8 1340 aa36.87■■■■□ 3.49
SMARCD2-210ENST00000584400 KCNQ2O43526 872 aa36.86■■■■□ 3.49
SMARCD2-210ENST00000584400 NBPF14Q5TI25 921 aa36.86■■■■□ 3.49
SMARCD2-210ENST00000584400 PTF1AQ7RTS3 328 aa36.86■■■■□ 3.49
SMARCD2-210ENST00000584400 SPG7Q9UQ90 795 aa36.85■■■■□ 3.49
SMARCD2-210ENST00000584400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.82■■■■□ 3.48
SMARCD2-210ENST00000584400 IGSF1Q8N6C5 1336 aa36.82■■■■□ 3.48
SMARCD2-210ENST00000584400 PLEKHG2Q9H7P9 1386 aa36.81■■■■□ 3.48
SMARCD2-210ENST00000584400 NHSQ6T4R5 1651 aa36.81■■■■□ 3.48
SMARCD2-210ENST00000584400 MTHFSP49914 203 aa36.81■■■■□ 3.48
SMARCD2-210ENST00000584400 ZEB1P37275 1124 aaPredicted RBP36.8■■■■□ 3.48
SMARCD2-210ENST00000584400 RGPD3A6NKT7 1758 aaPredicted RBP36.79■■■■□ 3.48
SMARCD2-210ENST00000584400 RGPD4Q7Z3J3 1758 aa36.79■■■■□ 3.48
SMARCD2-210ENST00000584400 SYTL4Q96C24 671 aaPredicted RBP36.78■■■■□ 3.48
SMARCD2-210ENST00000584400 CNGB1Q14028 1251 aaPredicted RBP36.77■■■■□ 3.48
SMARCD2-210ENST00000584400 RREB1Q92766 1687 aa36.76■■■■□ 3.47
SMARCD2-210ENST00000584400 PSDA5PKW4 1024 aaPredicted RBP36.75■■■■□ 3.47
SMARCD2-210ENST00000584400 PRIM1P49642 420 aaKnown RBP36.75■■■■□ 3.47
SMARCD2-210ENST00000584400 R3HDM1Q15032 1099 aaKnown RBP36.75■■■■□ 3.47
SMARCD2-210ENST00000584400 TXNRD1Q16881 649 aa36.74■■■■□ 3.47
SMARCD2-210ENST00000584400 IL13P35225 146 aa36.73■■■■□ 3.47
SMARCD2-210ENST00000584400 CYP27B1O15528 508 aa36.72■■■■□ 3.47
SMARCD2-210ENST00000584400 SHANK3Q9BYB0 1731 aa36.72■■■■□ 3.47
SMARCD2-210ENST00000584400 PROM2Q8N271 834 aa36.71■■■■□ 3.47
SMARCD2-210ENST00000584400 IFNL2Q8IZJ0 200 aa36.69■■■■□ 3.46
SMARCD2-210ENST00000584400 NUP188Q5SRE5 1749 aa36.68■■■■□ 3.46
SMARCD2-210ENST00000584400 DIAPH1O60610 1272 aaKnown RBP36.68■■■■□ 3.46
SMARCD2-210ENST00000584400 PLEKHO1Q53GL0 409 aaPredicted RBP36.68■■■■□ 3.46
SMARCD2-210ENST00000584400 PKD1L3Q7Z443 1732 aa36.68■■■■□ 3.46
SMARCD2-210ENST00000584400 NKX1-1Q15270 411 aaPredicted RBP36.67■■■■□ 3.46
SMARCD2-210ENST00000584400 AMOTQ4VCS5 1084 aa36.67■■■■□ 3.46
SMARCD2-210ENST00000584400 SULT6B1Q6IMI4 303 aa36.67■■■■□ 3.46
SMARCD2-210ENST00000584400 DOT1LQ8TEK3 1739 aa36.63■■■■□ 3.45
SMARCD2-210ENST00000584400 KDRP35968 1356 aa36.63■■■■□ 3.45
SMARCD2-210ENST00000584400 BTAF1O14981 1849 aa36.62■■■■□ 3.45
SMARCD2-210ENST00000584400 PHKG2P15735 406 aa36.62■■■■□ 3.45
SMARCD2-210ENST00000584400 SLC27A3Q5K4L6 730 aa36.62■■■■□ 3.45
SMARCD2-210ENST00000584400 CFAP53Q96M91 514 aa36.62■■■■□ 3.45
SMARCD2-210ENST00000584400 HSP90AB1P08238 724 aaKnown RBP36.61■■■■□ 3.45
SMARCD2-210ENST00000584400 AEBP1Q8IUX7 1158 aa36.61■■■■□ 3.45
SMARCD2-210ENST00000584400 STK32BQ9NY57 414 aa36.61■■■■□ 3.45
SMARCD2-210ENST00000584400 HMGB2P26583 209 aaKnown RBP36.58■■■■□ 3.45
SMARCD2-210ENST00000584400 MPRIPQ6WCQ1 1025 aa36.58■■■■□ 3.45
SMARCD2-210ENST00000584400 KAT6BQ8WYB5 2073 aa36.55■■■■□ 3.44
SMARCD2-210ENST00000584400 ZNF530Q6P9A1 599 aaPredicted RBP36.55■■■■□ 3.44
SMARCD2-210ENST00000584400 PPP2R1AP30153 589 aa36.54■■■■□ 3.44
SMARCD2-210ENST00000584400 C1orf141Q5JVX7 400 aa36.54■■■■□ 3.44
SMARCD2-210ENST00000584400 ANO8Q9HCE9 1232 aaPredicted RBP36.54■■■■□ 3.44
SMARCD2-210ENST00000584400 SLC15A2Q16348 729 aa36.53■■■■□ 3.44
SMARCD2-210ENST00000584400 SMARCC1Q92922 1105 aaPredicted RBP36.53■■■■□ 3.44
SMARCD2-210ENST00000584400 DCAF5Q96JK2 942 aa36.52■■■■□ 3.44
SMARCD2-210ENST00000584400 TMOD3Q9NYL9 352 aa36.52■■■■□ 3.44
SMARCD2-210ENST00000584400 U2SURPO15042 1029 aaKnown RBP36.51■■■■□ 3.44
SMARCD2-210ENST00000584400 HMOX1P09601 288 aa36.51■■■■□ 3.44
SMARCD2-210ENST00000584400 LRRC4BQ9NT99 713 aa36.5■■■■□ 3.43
SMARCD2-210ENST00000584400 NUDCQ9Y266 331 aa36.5■■■■□ 3.43
SMARCD2-210ENST00000584400 CCNL1Q9UK58 526 aaPredicted RBP36.49■■■■□ 3.43
SMARCD2-210ENST00000584400 COL3A1P02461 1466 aaPredicted RBP36.49■■■■□ 3.43
SMARCD2-210ENST00000584400 ERVV-2B6SEH9 535 aa36.48■■■■□ 3.43
SMARCD2-210ENST00000584400 PIGBQ92521 554 aa36.48■■■■□ 3.43
SMARCD2-210ENST00000584400 DDX10Q13206 875 aaKnown RBP36.47■■■■□ 3.43
SMARCD2-210ENST00000584400 PALLDQ8WX93 1383 aa36.46■■■■□ 3.43
SMARCD2-210ENST00000584400 AKAP4Q5JQC9 854 aa36.43■■■■□ 3.42
SMARCD2-210ENST00000584400 TOGARAM1Q9Y4F4 1720 aa36.42■■■■□ 3.42
SMARCD2-210ENST00000584400 LRP5O75197 1615 aa36.42■■■■□ 3.42
SMARCD2-210ENST00000584400 SPON1Q9HCB6 807 aa36.4■■■■□ 3.42
SMARCD2-210ENST00000584400 LY75O60449 1722 aa36.39■■■■□ 3.42
SMARCD2-210ENST00000584400 PAPPAQ13219 1627 aa36.39■■■■□ 3.42
SMARCD2-210ENST00000584400 CABP4P57796 275 aa36.39■■■■□ 3.42
SMARCD2-210ENST00000584400 RALBP1Q15311 655 aa36.39■■■■□ 3.42
SMARCD2-210ENST00000584400 AKT1S1Q96B36 256 aa36.38■■■■□ 3.41
SMARCD2-210ENST00000584400 KCNQ4P56696 695 aa36.37■■■■□ 3.41
SMARCD2-210ENST00000584400 ZNF827Q17R98 1081 aa36.36■■■■□ 3.41
SMARCD2-210ENST00000584400 KDM6AO15550 1401 aaPredicted RBP36.35■■■■□ 3.41
SMARCD2-210ENST00000584400 TFCP2L1Q9NZI6 479 aa36.35■■■■□ 3.41
SMARCD2-210ENST00000584400 ITGB4P16144 1822 aa36.35■■■■□ 3.41
SMARCD2-210ENST00000584400 MTHFSDQ2M296 383 aaKnown RBP36.34■■■■□ 3.41
SMARCD2-210ENST00000584400 U2AF1L5P0DN76 240 aaPredicted RBP36.33■■■■□ 3.41
SMARCD2-210ENST00000584400 U2AF1Q01081 240 aaKnown RBP eCLIP36.33■■■■□ 3.41
SMARCD2-210ENST00000584400 GAS2L2Q8NHY3 880 aa36.33■■■■□ 3.41
SMARCD2-210ENST00000584400 ASAP1Q9ULH1 1129 aa36.33■■■■□ 3.41
SMARCD2-210ENST00000584400 ATG3Q9NT62 314 aa36.32■■■■□ 3.4
SMARCD2-210ENST00000584400 LOC102724428A0A0B4J2F2 783 aa36.31■■■■□ 3.4
SMARCD2-210ENST00000584400 SIK1P57059 783 aa36.31■■■■□ 3.4
SMARCD2-210ENST00000584400 FCHSD2O94868 740 aa36.28■■■■□ 3.4
SMARCD2-210ENST00000584400 NFATC2IPQ8NCF5 419 aa36.28■■■■□ 3.4
SMARCD2-210ENST00000584400 PDGFDQ9GZP0 370 aaPredicted RBP36.28■■■■□ 3.4
SMARCD2-210ENST00000584400 MTFR1LQ9H019 292 aa36.28■■■■□ 3.4
SMARCD2-210ENST00000584400 ZBTB7AO95365 584 aa36.27■■■■□ 3.4
SMARCD2-210ENST00000584400 PRKAR2BP31323 418 aa36.27■■■■□ 3.4
SMARCD2-210ENST00000584400 RSPH6AQ9H0K4 717 aa36.27■■■■□ 3.4
SMARCD2-210ENST00000584400 CASZ1Q86V15 1759 aa36.27■■■■□ 3.4
SMARCD2-210ENST00000584400 SLC16A10Q8TF71 515 aa36.26■■■■□ 3.4
SMARCD2-210ENST00000584400 PPP1R1BQ9UD71 204 aaPredicted RBP36.26■■■■□ 3.4
SMARCD2-210ENST00000584400 ATP6V1AP38606 617 aa36.25■■■■□ 3.39
SMARCD2-210ENST00000584400 RNMTO43148 476 aaKnown RBP36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms