RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 SOX12O15370 315 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 GCP02774 474 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 HMOX1P09601 288 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 RIPK4P57078 832 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 BRINP3Q76B58 766 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
SNX11-213ENST00000584335 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
SNX11-213ENST00000584335 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 RRP1P56182 461 aaKnown RBP12.27□□□□□ -0.45
SNX11-213ENST00000584335 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 ARHGEF25Q86VW2 580 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 PHACTR3Q96KR7 559 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.45
SNX11-213ENST00000584335 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
SNX11-213ENST00000584335 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
SNX11-213ENST00000584335 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
SNX11-213ENST00000584335 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
SNX11-213ENST00000584335 GSE1Q14687 1217 aa12.25□□□□□ -0.45
SNX11-213ENST00000584335 EYA1Q99502 592 aa12.25□□□□□ -0.45
SNX11-213ENST00000584335 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
SNX11-213ENST00000584335 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
SNX11-213ENST00000584335 GABBR2O75899 941 aa12.24□□□□□ -0.45
SNX11-213ENST00000584335 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
SNX11-213ENST00000584335 COL18A1P39060 1754 aa12.23□□□□□ -0.45
SNX11-213ENST00000584335 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
SNX11-213ENST00000584335 CPDO75976 1380 aa12.22□□□□□ -0.45
SNX11-213ENST00000584335 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
SNX11-213ENST00000584335 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
SNX11-213ENST00000584335 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
SNX11-213ENST00000584335 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
SNX11-213ENST00000584335 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
SNX11-213ENST00000584335 ABCA3Q99758 1704 aa12.21□□□□□ -0.45
SNX11-213ENST00000584335 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
SNX11-213ENST00000584335 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
SNX11-213ENST00000584335 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 AHDC1Q5TGY3 1603 aaPredicted RBP12.2□□□□□ -0.46
SNX11-213ENST00000584335 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
SNX11-213ENST00000584335 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 PYGBP11216 843 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 GNAI1P63096 354 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
SNX11-213ENST00000584335 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
SNX11-213ENST00000584335 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
SNX11-213ENST00000584335 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
SNX11-213ENST00000584335 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
SNX11-213ENST00000584335 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
SNX11-213ENST00000584335 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
SNX11-213ENST00000584335 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
SNX11-213ENST00000584335 ERBB3P21860 1342 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 MAP3K13O43283 966 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
SNX11-213ENST00000584335 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
SNX11-213ENST00000584335 NBPF6Q5VWK0 638 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 ANKRD24Q8TF21 1146 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 NBPF4Q96M43 638 aa12.17□□□□□ -0.46
SNX11-213ENST00000584335 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
SNX11-213ENST00000584335 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
SNX11-213ENST00000584335 CLCN6P51797 869 aa12.16□□□□□ -0.46
SNX11-213ENST00000584335 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
SNX11-213ENST00000584335 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
SNX11-213ENST00000584335 LTV1Q96GA3 475 aaPredicted RBP12.16□□□□□ -0.46
SNX11-213ENST00000584335 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
SNX11-213ENST00000584335 CRB1P82279 1406 aa12.16□□□□□ -0.46
SNX11-213ENST00000584335 ZC3H6P61129 1189 aaKnown RBP12.15□□□□□ -0.46
SNX11-213ENST00000584335 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
SNX11-213ENST00000584335 ZBTB7CA1YPR0 619 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 FAM83GA6ND36 823 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 PLIN1O60240 522 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 BCAR3O75815 825 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 PDE3AQ14432 1141 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 MS4A3Q96HJ5 214 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
SNX11-213ENST00000584335 OVOS2A0A0G2JMS6 1433 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 CHL1O00533 1208 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
SNX11-213ENST00000584335 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
SNX11-213ENST00000584335 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
SNX11-213ENST00000584335 THUMPD2Q9BTF0 503 aaKnown RBP12.13□□□□□ -0.47
SNX11-213ENST00000584335 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
SNX11-213ENST00000584335 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
SNX11-213ENST00000584335 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
SNX11-213ENST00000584335 EXOC6Q8TAG9 804 aa12.12□□□□□ -0.47
SNX11-213ENST00000584335 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
SNX11-213ENST00000584335 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
SNX11-213ENST00000584335 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
SNX11-213ENST00000584335 HAP1P54257 671 aaPredicted RBP12.11□□□□□ -0.47
SNX11-213ENST00000584335 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
SNX11-213ENST00000584335 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
SNX11-213ENST00000584335 MCM10Q7L590 875 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms